RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TRERF1Q96PN7 1200 aa19.13■□□□□ 0.65
PTPRU-210ENST00000527027 NAPBQ9H115 298 aa19.13■□□□□ 0.65
PTPRU-210ENST00000527027 ASTN1O14525 1302 aa19.13■□□□□ 0.65
PTPRU-210ENST00000527027 FGBP02675 491 aa19.12■□□□□ 0.65
PTPRU-210ENST00000527027 PPARAQ07869 468 aa19.12■□□□□ 0.65
PTPRU-210ENST00000527027 ITGA7Q13683 1181 aa19.12■□□□□ 0.65
PTPRU-210ENST00000527027 FSCN1Q16658 493 aaKnown RBP19.12■□□□□ 0.65
PTPRU-210ENST00000527027 RCSD1Q6JBY9 416 aa19.12■□□□□ 0.65
PTPRU-210ENST00000527027 HERVK_113Q902F9 699 aa19.12■□□□□ 0.65
PTPRU-210ENST00000527027 SEZ6LQ9BYH1 1024 aa19.12■□□□□ 0.65
PTPRU-210ENST00000527027 AP5M1Q9H0R1 490 aa19.12■□□□□ 0.65
PTPRU-210ENST00000527027 MSRAQ9UJ68 235 aa19.12■□□□□ 0.65
PTPRU-210ENST00000527027 TTC41PQ6P2S7 1318 aa19.11■□□□□ 0.65
PTPRU-210ENST00000527027 DYNC1LI2O43237 492 aaPredicted RBP19.11■□□□□ 0.65
PTPRU-210ENST00000527027 ALAS1P13196 640 aa19.11■□□□□ 0.65
PTPRU-210ENST00000527027 AKNAD1Q5T1N1 836 aa19.11■□□□□ 0.65
PTPRU-210ENST00000527027 IQSEC1Q6DN90 963 aa19.11■□□□□ 0.65
PTPRU-210ENST00000527027 TLK2Q86UE8 772 aa19.11■□□□□ 0.65
PTPRU-210ENST00000527027 CHMP4CQ96CF2 233 aa19.11■□□□□ 0.65
PTPRU-210ENST00000527027 MTIF3Q9H2K0 278 aaKnown RBP19.11■□□□□ 0.65
PTPRU-210ENST00000527027 HIPK3Q9H422 1215 aa19.11■□□□□ 0.65
PTPRU-210ENST00000527027 PRDM12Q9H4Q4 367 aa19.11■□□□□ 0.65
PTPRU-210ENST00000527027 STX8Q9UNK0 236 aa19.11■□□□□ 0.65
PTPRU-210ENST00000527027 MYH4Q9Y623 1939 aa19.1■□□□□ 0.65
PTPRU-210ENST00000527027 GRIN2DO15399 1336 aa19.1■□□□□ 0.65
PTPRU-210ENST00000527027 ERC2O15083 957 aa19.1■□□□□ 0.65
PTPRU-210ENST00000527027 ZEB2O60315 1214 aa19.1■□□□□ 0.65
PTPRU-210ENST00000527027 SMPD1P17405 629 aa19.1■□□□□ 0.65
PTPRU-210ENST00000527027 RAB30Q15771 203 aa19.1■□□□□ 0.65
PTPRU-210ENST00000527027 ZMYM1Q5SVZ6 1142 aa19.1■□□□□ 0.65
PTPRU-210ENST00000527027 TAPT1Q6NXT6 567 aa19.1■□□□□ 0.65
PTPRU-210ENST00000527027 KCTD1Q719H9 257 aa19.1■□□□□ 0.65
PTPRU-210ENST00000527027 PPM1EQ8WY54 764 aa19.1■□□□□ 0.65
PTPRU-210ENST00000527027 CXXC1Q9P0U4 656 aaPredicted RBP19.1■□□□□ 0.65
PTPRU-210ENST00000527027 PRR12Q9ULL5 1215 aa19.1■□□□□ 0.65
PTPRU-210ENST00000527027 Q9Y3F1 56 aa19.1■□□□□ 0.65
PTPRU-210ENST00000527027 SNAP25P60880 206 aa19.09■□□□□ 0.65
PTPRU-210ENST00000527027 MUM1L1Q5H9M0 696 aa19.09■□□□□ 0.65
PTPRU-210ENST00000527027 PI4K2BQ8TCG2 481 aa19.09■□□□□ 0.65
PTPRU-210ENST00000527027 FSD1Q9BTV5 496 aa19.09■□□□□ 0.65
PTPRU-210ENST00000527027 TRPV6Q9H1D0 765 aa19.09■□□□□ 0.65
PTPRU-210ENST00000527027 PDGFCQ9NRA1 345 aa19.09■□□□□ 0.65
PTPRU-210ENST00000527027 IL17RBQ9NRM6 502 aa19.09■□□□□ 0.65
PTPRU-210ENST00000527027 CYP39A1Q9NYL5 469 aa19.09■□□□□ 0.65
PTPRU-210ENST00000527027 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.09■□□□□ 0.65
PTPRU-210ENST00000527027 MCM3APO60318 1980 aa19.09■□□□□ 0.65
PTPRU-210ENST00000527027 MUC3AQ02505 3323 aa19.08■□□□□ 0.65
PTPRU-210ENST00000527027 UMODL1Q5DID0 1318 aa19.08■□□□□ 0.65
PTPRU-210ENST00000527027 TSPY2A6NKD2 308 aa19.08■□□□□ 0.64
PTPRU-210ENST00000527027 EEPD1Q7L9B9 569 aa19.08■□□□□ 0.64
PTPRU-210ENST00000527027 ATXN2LQ8WWM7 1075 aaKnown RBP19.08■□□□□ 0.64
PTPRU-210ENST00000527027 DDX49Q9Y6V7 483 aaKnown RBP19.08■□□□□ 0.64
PTPRU-210ENST00000527027 CHD7Q9P2D1 2997 aa19.08■□□□□ 0.64
PTPRU-210ENST00000527027 TNFRSF10AO00220 468 aa19.07■□□□□ 0.64
PTPRU-210ENST00000527027 PTGS1P23219 599 aa19.07■□□□□ 0.64
PTPRU-210ENST00000527027 CCL23P55773 120 aa19.07■□□□□ 0.64
PTPRU-210ENST00000527027 ADGRE1Q14246 886 aa19.07■□□□□ 0.64
PTPRU-210ENST00000527027 NSMFQ6X4W1 530 aa19.07■□□□□ 0.64
PTPRU-210ENST00000527027 KIAA1211Q6ZU35 1233 aa19.07■□□□□ 0.64
PTPRU-210ENST00000527027 OTOP2Q7RTS6 562 aa19.07■□□□□ 0.64
PTPRU-210ENST00000527027 FBXO16Q8IX29 292 aaPredicted RBP19.07■□□□□ 0.64
PTPRU-210ENST00000527027 MORC4Q8TE76 937 aa19.07■□□□□ 0.64
PTPRU-210ENST00000527027 NOC4LQ9BVI4 516 aaKnown RBP19.07■□□□□ 0.64
PTPRU-210ENST00000527027 NKX2-4Q9H2Z4 354 aa19.07■□□□□ 0.64
PTPRU-210ENST00000527027 SLC28A3Q9HAS3 691 aa19.07■□□□□ 0.64
PTPRU-210ENST00000527027 VTA1Q9NP79 307 aa19.07■□□□□ 0.64
PTPRU-210ENST00000527027 INCENPQ9NQS7 918 aa19.07■□□□□ 0.64
PTPRU-210ENST00000527027 B4GALT4O60513 344 aa19.06■□□□□ 0.64
PTPRU-210ENST00000527027 NMT2O60551 498 aa19.06■□□□□ 0.64
PTPRU-210ENST00000527027 CTDSPL2Q05D32 466 aa19.06■□□□□ 0.64
PTPRU-210ENST00000527027 TMEM63BQ5T3F8 832 aa19.06■□□□□ 0.64
PTPRU-210ENST00000527027 RPUSD2Q8IZ73 545 aaKnown RBP19.06■□□□□ 0.64
PTPRU-210ENST00000527027 PURBQ96QR8 312 aaKnown RBP19.06■□□□□ 0.64
PTPRU-210ENST00000527027 CCPG1Q9ULG6 757 aa19.06■□□□□ 0.64
PTPRU-210ENST00000527027 MYO9BQ13459 2157 aa19.06■□□□□ 0.64
PTPRU-210ENST00000527027 FOXP2O15409 715 aa19.05■□□□□ 0.64
PTPRU-210ENST00000527027 ICAM1P05362 532 aa19.05■□□□□ 0.64
PTPRU-210ENST00000527027 IGFBP4P22692 258 aa19.05■□□□□ 0.64
PTPRU-210ENST00000527027 NOVP48745 357 aa19.05■□□□□ 0.64
PTPRU-210ENST00000527027 PSMC6P62333 389 aa19.05■□□□□ 0.64
PTPRU-210ENST00000527027 OTUD7AQ8TE49 926 aaPredicted RBP19.05■□□□□ 0.64
PTPRU-210ENST00000527027 ASB2Q96Q27 587 aa19.05■□□□□ 0.64
PTPRU-210ENST00000527027 WNT8AQ9H1J5 351 aa19.05■□□□□ 0.64
PTPRU-210ENST00000527027 THEGQ9P2T0 379 aa19.05■□□□□ 0.64
PTPRU-210ENST00000527027 ANAPC4Q9UJX5 808 aa19.05■□□□□ 0.64
PTPRU-210ENST00000527027 YBX2Q9Y2T7 364 aaKnown RBP19.05■□□□□ 0.64
PTPRU-210ENST00000527027 RANBP6O60518 1105 aaKnown RBP19.04■□□□□ 0.64
PTPRU-210ENST00000527027 BAATQ14032 418 aaPredicted RBP19.04■□□□□ 0.64
PTPRU-210ENST00000527027 CCDC85BQ15834 202 aaPredicted RBP19.04■□□□□ 0.64
PTPRU-210ENST00000527027 DUSP28Q4G0W2 176 aa19.04■□□□□ 0.64
PTPRU-210ENST00000527027 RASGRP2Q7LDG7 609 aa19.04■□□□□ 0.64
PTPRU-210ENST00000527027 DCAF4Q8WV16 495 aa19.04■□□□□ 0.64
PTPRU-210ENST00000527027 ALDH8A1Q9H2A2 487 aaPredicted RBP19.04■□□□□ 0.64
PTPRU-210ENST00000527027 RANBP17Q9H2T7 1088 aaKnown RBP19.04■□□□□ 0.64
PTPRU-210ENST00000527027 ADD3Q9UEY8 706 aaKnown RBP19.04■□□□□ 0.64
PTPRU-210ENST00000527027 MTMR7Q9Y216 660 aa19.04■□□□□ 0.64
PTPRU-210ENST00000527027 SLC4A7Q9Y6M7 1214 aa19.04■□□□□ 0.64
PTPRU-210ENST00000527027 SUPT20HL2P0C7V6 817 aa19.03■□□□□ 0.64
PTPRU-210ENST00000527027 MRPS5P82675 430 aaKnown RBP19.03■□□□□ 0.64
PTPRU-210ENST00000527027 CCDC96Q2M329 555 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms