RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 FBXO16Q8IX29 292 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-204ENST00000526468 FAM126BQ8IXS8 530 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 FAM133AQ8N9E0 248 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 PI4K2BQ8TCG2 481 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 OTUD7AQ8TE49 926 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-204ENST00000526468 GMCL1Q96IK5 515 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 AGBL1Q96MI9 1066 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 KATNBL1Q9H079 304 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 ZNF536O15090 1300 aa13.9□□□□□ -0.19
CAPN1-204ENST00000526468 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-204ENST00000526468 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-204ENST00000526468 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-204ENST00000526468 ASB14A6NK59 587 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 FDX1P10109 184 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 CSF2RAP15509 400 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 MX1P20591 662 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 MCCP23508 829 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 TNFAIP2Q03169 654 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 GRIN2CQ14957 1233 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 TKFCQ3LXA3 575 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 PPP4R3BQ5MIZ7 849 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 ZMYM1Q5SVZ6 1142 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 TMEM199Q8N511 208 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 CHURC1Q8WUH1 139 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 TRERF1Q96PN7 1200 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 DOCK5Q9H7D0 1870 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 ASTN1O14525 1302 aa13.89□□□□□ -0.19
CAPN1-204ENST00000526468 SIP14410 1827 aa13.88□□□□□ -0.19
CAPN1-204ENST00000526468 NMT2O60551 498 aa13.88□□□□□ -0.19
CAPN1-204ENST00000526468 ACRP10323 421 aa13.88□□□□□ -0.19
CAPN1-204ENST00000526468 SNAP25P60880 206 aa13.88□□□□□ -0.19
CAPN1-204ENST00000526468 CTDSPL2Q05D32 466 aa13.88□□□□□ -0.19
CAPN1-204ENST00000526468 FSCN1Q16658 493 aaKnown RBP13.88□□□□□ -0.19
CAPN1-204ENST00000526468 CXCL17Q6UXB2 119 aa13.88□□□□□ -0.19
CAPN1-204ENST00000526468 NSMFQ6X4W1 530 aa13.88□□□□□ -0.19
CAPN1-204ENST00000526468 USP38Q8NB14 1042 aa13.88□□□□□ -0.19
CAPN1-204ENST00000526468 STAG1Q8WVM7 1258 aa13.88□□□□□ -0.19
CAPN1-204ENST00000526468 IPO9Q96P70 1041 aaKnown RBP13.88□□□□□ -0.19
CAPN1-204ENST00000526468 AP5M1Q9H0R1 490 aa13.88□□□□□ -0.19
CAPN1-204ENST00000526468 ZNF576Q9H609 170 aa13.88□□□□□ -0.19
CAPN1-204ENST00000526468 CCPG1Q9ULG6 757 aa13.88□□□□□ -0.19
CAPN1-204ENST00000526468 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.88□□□□□ -0.19
CAPN1-204ENST00000526468 DDX49Q9Y6V7 483 aaKnown RBP13.88□□□□□ -0.19
CAPN1-204ENST00000526468 CHD9Q3L8U1 2897 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 MICAL3Q7RTP6 2002 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 KAT6AQ92794 2004 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 SOWAHBA6NEL2 793 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 GRXCR1A8MXD5 290 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 CTAGE5O15320 804 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 RANBP6O60518 1105 aaKnown RBP13.87□□□□□ -0.19
CAPN1-204ENST00000526468 PTGS1P23219 599 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 CYP2C18P33260 490 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 PBX2P40425 430 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 CDK7P50613 346 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 TMEM240Q5SV17 173 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 EEPD1Q7L9B9 569 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 GAS2L1Q99501 681 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-204ENST00000526468 PBX4Q9BYU1 374 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 MTIF3Q9H2K0 278 aaKnown RBP13.87□□□□□ -0.19
CAPN1-204ENST00000526468 HIPK3Q9H422 1215 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 TOMM22Q9NS69 142 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 PRR12Q9ULL5 1215 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 NLRC5Q86WI3 1866 aa13.87□□□□□ -0.19
CAPN1-204ENST00000526468 CHD7Q9P2D1 2997 aa13.86□□□□□ -0.19
CAPN1-204ENST00000526468 BAZ2BQ9UIF8 2168 aaKnown RBP13.86□□□□□ -0.19
CAPN1-204ENST00000526468 ZEB2O60315 1214 aa13.86□□□□□ -0.19
CAPN1-204ENST00000526468 MUM1L1Q5H9M0 696 aa13.86□□□□□ -0.19
CAPN1-204ENST00000526468 ZNF365Q70YC5 407 aa13.86□□□□□ -0.19
CAPN1-204ENST00000526468 CYP39A1Q9NYL5 469 aa13.86□□□□□ -0.19
CAPN1-204ENST00000526468 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-204ENST00000526468 GNEQ9Y223 722 aaKnown RBP13.86□□□□□ -0.19
CAPN1-204ENST00000526468 MUC3AQ02505 3323 aa13.86□□□□□ -0.19
CAPN1-204ENST00000526468 UMODL1Q5DID0 1318 aa13.86□□□□□ -0.19
CAPN1-204ENST00000526468 BDP1A6H8Y1 2624 aa13.85□□□□□ -0.19
CAPN1-204ENST00000526468 FOXP2O15409 715 aa13.85□□□□□ -0.19
CAPN1-204ENST00000526468 CABYRO75952 493 aa13.85□□□□□ -0.19
CAPN1-204ENST00000526468 CD4P01730 458 aa13.85□□□□□ -0.19
CAPN1-204ENST00000526468 SMPD1P17405 629 aa13.85□□□□□ -0.19
CAPN1-204ENST00000526468 RAB30Q15771 203 aa13.85□□□□□ -0.19
CAPN1-204ENST00000526468 DCAF4Q8WV16 495 aa13.85□□□□□ -0.19
CAPN1-204ENST00000526468 PPM1EQ8WY54 764 aa13.85□□□□□ -0.19
CAPN1-204ENST00000526468 PRDM12Q9H4Q4 367 aa13.85□□□□□ -0.19
CAPN1-204ENST00000526468 VTA1Q9NP79 307 aa13.85□□□□□ -0.19
CAPN1-204ENST00000526468 IL23AQ9NPF7 189 aa13.85□□□□□ -0.19
CAPN1-204ENST00000526468 FRMPD2Q68DX3 1309 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-204ENST00000526468 PLA2G6O60733 806 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 ICAM1P05362 532 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 PSMC6P62333 389 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 NKX3-2P78367 333 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 ITGA7Q13683 1181 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 RRP12Q5JTH9 1297 aaKnown RBP13.84□□□□□ -0.19
CAPN1-204ENST00000526468 RASIP1Q5U651 963 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 VPS53Q5VIR6 699 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 RCSD1Q6JBY9 416 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 C16orf59Q7L2K0 433 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 SYMPKQ92797 1274 aaKnown RBP13.84□□□□□ -0.19
CAPN1-204ENST00000526468 INCENPQ9NQS7 918 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 PDGFCQ9NRA1 345 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 IL17RBQ9NRM6 502 aa13.84□□□□□ -0.19
CAPN1-204ENST00000526468 MSRAQ9UJ68 235 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms