RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 HELLSQ9NRZ9 838 aa14.4□□□□□ -0.1
COLCA1-202ENST00000526150 CCPG1Q9ULG6 757 aa14.4□□□□□ -0.1
COLCA1-202ENST00000526150 PRR12Q9ULL5 1215 aa14.4□□□□□ -0.1
COLCA1-202ENST00000526150 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.4□□□□□ -0.1
COLCA1-202ENST00000526150 ZNF536O15090 1300 aa14.4□□□□□ -0.1
COLCA1-202ENST00000526150 LAMA2P24043 3122 aaKnown RBP14.39□□□□□ -0.11
COLCA1-202ENST00000526150 SOWAHBA6NEL2 793 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 B4DLN1 442 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 DYNC1LI2O43237 492 aaPredicted RBP14.39□□□□□ -0.11
COLCA1-202ENST00000526150 ADCY6O43306 1168 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 ORC4O43929 436 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 ICAM1P05362 532 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 MRPL12P52815 198 aaKnown RBP14.39□□□□□ -0.11
COLCA1-202ENST00000526150 CTDSPL2Q05D32 466 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 ITGA7Q13683 1181 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 ALX1Q15699 326 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 RAB30Q15771 203 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 FSCN1Q16658 493 aaKnown RBP14.39□□□□□ -0.11
COLCA1-202ENST00000526150 CCDC96Q2M329 555 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 TMEM240Q5SV17 173 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 NSMFQ6X4W1 530 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 PPP1R12CQ9BZL4 782 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 IL23AQ9NPF7 189 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 TOMM22Q9NS69 142 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 CYP39A1Q9NYL5 469 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 MSRAQ9UJ68 235 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 GNEQ9Y223 722 aaKnown RBP14.39□□□□□ -0.11
COLCA1-202ENST00000526150 PCDHB15Q9Y5E8 787 aa14.39□□□□□ -0.11
COLCA1-202ENST00000526150 CD4P01730 458 aa14.38□□□□□ -0.11
COLCA1-202ENST00000526150 FGBP02675 491 aa14.38□□□□□ -0.11
COLCA1-202ENST00000526150 CSF2RAP15509 400 aa14.38□□□□□ -0.11
COLCA1-202ENST00000526150 BEX3Q00994 111 aa14.38□□□□□ -0.11
COLCA1-202ENST00000526150 BRDTQ58F21 947 aaPredicted RBP14.38□□□□□ -0.11
COLCA1-202ENST00000526150 ANKRD45Q5TZF3 282 aa14.38□□□□□ -0.11
COLCA1-202ENST00000526150 CXCL17Q6UXB2 119 aa14.38□□□□□ -0.11
COLCA1-202ENST00000526150 RPUSD2Q8IZ73 545 aaKnown RBP14.38□□□□□ -0.11
COLCA1-202ENST00000526150 SLC43A3Q8NBI5 491 aa14.38□□□□□ -0.11
COLCA1-202ENST00000526150 HIPK3Q9H422 1215 aa14.38□□□□□ -0.11
COLCA1-202ENST00000526150 IL17RBQ9NRM6 502 aa14.38□□□□□ -0.11
COLCA1-202ENST00000526150 POLR3EQ9NVU0 708 aa14.38□□□□□ -0.11
COLCA1-202ENST00000526150 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.37□□□□□ -0.11
COLCA1-202ENST00000526150 CTAGE5O15320 804 aa14.37□□□□□ -0.11
COLCA1-202ENST00000526150 FGRP09769 529 aa14.37□□□□□ -0.11
COLCA1-202ENST00000526150 SUPT20HL2P0C7V6 817 aa14.37□□□□□ -0.11
COLCA1-202ENST00000526150 TOP1P11387 765 aaKnown RBP14.37□□□□□ -0.11
COLCA1-202ENST00000526150 PCP11498 1178 aaKnown RBP14.37□□□□□ -0.11
COLCA1-202ENST00000526150 NOVP48745 357 aa14.37□□□□□ -0.11
COLCA1-202ENST00000526150 MFAP1P55081 439 aaKnown RBP14.37□□□□□ -0.11
COLCA1-202ENST00000526150 GRIN2CQ14957 1233 aa14.37□□□□□ -0.11
COLCA1-202ENST00000526150 RASIP1Q5U651 963 aa14.37□□□□□ -0.11
COLCA1-202ENST00000526150 BTNL9Q6UXG8 535 aa14.37□□□□□ -0.11
COLCA1-202ENST00000526150 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
COLCA1-202ENST00000526150 ZNF365Q70YC5 407 aa14.37□□□□□ -0.11
COLCA1-202ENST00000526150 TTC14Q96N46 770 aa14.37□□□□□ -0.11
COLCA1-202ENST00000526150 TCP11L1Q9NUJ3 509 aa14.37□□□□□ -0.11
COLCA1-202ENST00000526150 MTMR7Q9Y216 660 aa14.37□□□□□ -0.11
COLCA1-202ENST00000526150 MYO9BQ13459 2157 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 SMPD1P17405 629 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 NT5C2P49902 561 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 CPT1AP50416 773 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 IRX5P78411 483 aaPredicted RBP14.36□□□□□ -0.11
COLCA1-202ENST00000526150 MCMDC2Q4G0Z9 681 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 MUM1L1Q5H9M0 696 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 SYDE2Q5VT97 1194 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 TAPT1Q6NXT6 567 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 C16orf59Q7L2K0 433 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 OTUD7AQ8TE49 926 aaPredicted RBP14.36□□□□□ -0.11
COLCA1-202ENST00000526150 MORC4Q8TE76 937 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 HERVK_113Q902F9 699 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 CHMP4CQ96CF2 233 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 RANBP17Q9H2T7 1088 aaKnown RBP14.36□□□□□ -0.11
COLCA1-202ENST00000526150 GPHNQ9NQX3 736 aaPredicted RBP14.36□□□□□ -0.11
COLCA1-202ENST00000526150 RAD50Q92878 1312 aa14.36□□□□□ -0.11
COLCA1-202ENST00000526150 PTPDC1A2A3K4 754 aa14.35□□□□□ -0.11
COLCA1-202ENST00000526150 NKRFO15226 690 aaKnown RBP eCLIP14.35□□□□□ -0.11
COLCA1-202ENST00000526150 NMT2O60551 498 aa14.35□□□□□ -0.11
COLCA1-202ENST00000526150 ACRP10323 421 aa14.35□□□□□ -0.11
COLCA1-202ENST00000526150 CYP2C18P33260 490 aa14.35□□□□□ -0.11
COLCA1-202ENST00000526150 DUSP28Q4G0W2 176 aa14.35□□□□□ -0.11
COLCA1-202ENST00000526150 RRP12Q5JTH9 1297 aaKnown RBP14.35□□□□□ -0.11
COLCA1-202ENST00000526150 EEPD1Q7L9B9 569 aa14.35□□□□□ -0.11
COLCA1-202ENST00000526150 FBXO16Q8IX29 292 aaPredicted RBP14.35□□□□□ -0.11
COLCA1-202ENST00000526150 PBX4Q9BYU1 374 aa14.35□□□□□ -0.11
COLCA1-202ENST00000526150 MAF1Q9H063 256 aa14.35□□□□□ -0.11
COLCA1-202ENST00000526150 RNF41Q9H4P4 317 aaPredicted RBP14.35□□□□□ -0.11
COLCA1-202ENST00000526150 SLC28A3Q9HAS3 691 aa14.35□□□□□ -0.11
COLCA1-202ENST00000526150 ASTN1O14525 1302 aa14.35□□□□□ -0.11
COLCA1-202ENST00000526150 ZMYM6O95789 1325 aa14.35□□□□□ -0.11
COLCA1-202ENST00000526150 KPNA6O60684 536 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 FGAP02671 866 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 PFKMP08237 780 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 ALDH5A1P51649 535 aaPredicted RBP14.34□□□□□ -0.11
COLCA1-202ENST00000526150 PDE1AP54750 535 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 SNAP25P60880 206 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 AAMPQ13685 434 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 BAATQ14032 418 aaPredicted RBP14.34□□□□□ -0.11
COLCA1-202ENST00000526150 CCDC178Q5BJE1 867 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 TJAP1Q5JTD0 557 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 AKNAD1Q5T1N1 836 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 MFSD6Q6ZSS7 791 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms