RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PLD2O14939 933 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 AURKAO14965 403 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 CYP26A1O43174 497 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 TGFB1P01137 390 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 SYPP08247 313 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 VAV1P15498 845 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 CD96P40200 585 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 GAB4Q2WGN9 574 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 ZC3H12BQ5HYM0 836 aaKnown RBP6.64□□□□□ -1.35
USP47-206ENST00000525367 RTP2Q5QGT7 225 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 SLC35F1Q5T1Q4 408 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 MCTP1Q6DN14 999 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 KCNT2Q6UVM3 1135 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 USP53Q70EK8 1073 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 FGD2Q7Z6J4 655 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 FRS2Q8WU20 508 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 NINJ1Q92982 152 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 IPO9Q96P70 1041 aaKnown RBP6.64□□□□□ -1.35
USP47-206ENST00000525367 METTL22Q9BUU2 404 aaPredicted RBP6.64□□□□□ -1.35
USP47-206ENST00000525367 ATP13A1Q9HD20 1204 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 CYP26B1Q9NR63 512 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 GPATCH2Q9NW75 528 aa6.64□□□□□ -1.35
USP47-206ENST00000525367 DNAJC8O75937 253 aaPredicted RBP6.63□□□□□ -1.35
USP47-206ENST00000525367 SCG5P05408 212 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 GSTM1P09488 218 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 HOXC12P31275 282 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 BMP8BP34820 402 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 POU4F1Q01851 419 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 MAP4K2Q12851 820 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 TM4SF20Q53R12 229 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 CWF19L1Q69YN2 538 aaKnown RBP6.63□□□□□ -1.35
USP47-206ENST00000525367 BRAPQ7Z569 592 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 CCDC103Q8IW40 242 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 ZNF655Q8N720 491 aaPredicted RBP6.63□□□□□ -1.35
USP47-206ENST00000525367 NPLOC4Q8TAT6 608 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 KCTD13Q8WZ19 329 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 COPS5Q92905 334 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 MFSD3Q96ES6 412 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 PITPNM2Q9BZ72 1349 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 TRIM39Q9HCM9 518 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 AP5S1Q9NUS5 200 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 CLEC1BQ9P126 229 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 SFMBT1Q9UHJ3 866 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 PCDHA11Q9Y5I1 949 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 BACE2Q9Y5Z0 518 aa6.63□□□□□ -1.35
USP47-206ENST00000525367 C2orf71A6NGG8 1288 aa6.62□□□□□ -1.35
USP47-206ENST00000525367 ZNF205O95201 554 aa6.62□□□□□ -1.35
USP47-206ENST00000525367 PARNO95453 639 aaKnown RBP6.62□□□□□ -1.35
USP47-206ENST00000525367 S100BP04271 92 aaPredicted RBP6.62□□□□□ -1.35
USP47-206ENST00000525367 IFI16Q16666 785 aaKnown RBP6.62□□□□□ -1.35
USP47-206ENST00000525367 THNSL2Q86YJ6 484 aa6.62□□□□□ -1.35
USP47-206ENST00000525367 PPIL6Q8IXY8 311 aa6.62□□□□□ -1.35
USP47-206ENST00000525367 SYNPOQ8N3V7 929 aa6.62□□□□□ -1.35
USP47-206ENST00000525367 ENOX1Q8TC92 643 aaKnown RBP6.62□□□□□ -1.35
USP47-206ENST00000525367 SCLYQ96I15 445 aa6.62□□□□□ -1.35
USP47-206ENST00000525367 MRPL4Q9BYD3 311 aaKnown RBP6.62□□□□□ -1.35
USP47-206ENST00000525367 TRIT1Q9H3H1 467 aaKnown RBP6.62□□□□□ -1.35
USP47-206ENST00000525367 MYH16Q9H6N6 1097 aa6.62□□□□□ -1.35
USP47-206ENST00000525367 MKNK2Q9HBH9 465 aa6.62□□□□□ -1.35
USP47-206ENST00000525367 PIM2Q9P1W9 311 aa6.62□□□□□ -1.35
USP47-206ENST00000525367 DUSP13Q9UII6 198 aa6.62□□□□□ -1.35
USP47-206ENST00000525367 TCFL5Q9UL49 500 aa6.62□□□□□ -1.35
USP47-206ENST00000525367 A0A087X0B3 334 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 CCDC163A0A0D9SF12 145 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 TMEM82A0PJX8 343 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 FAM83GA6ND36 823 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 MSCO60682 206 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 RASGRP1O95267 797 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 ESR1P03372 595 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 MYCLP1P12525 358 aaPredicted RBP6.61□□□□□ -1.35
USP47-206ENST00000525367 LCP1P13796 627 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 PLS3P13797 630 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 LTKP29376 864 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 CLCN7P51798 805 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 AMPD3Q01432 767 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 ZNF460Q14592 562 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 PLEKHG6Q3KR16 790 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 FNDC3BQ53EP0 1204 aaKnown RBP6.61□□□□□ -1.35
USP47-206ENST00000525367 TRIM61Q5EBN2 209 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 MBLAC2Q68D91 279 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 CREG2Q8IUH2 290 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 UBR7Q8N806 425 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 NETO1Q8TDF5 533 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 CHPF2Q9P2E5 772 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 PLAAQ9Y263 795 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 RIPOR2Q9Y4F9 1068 aa6.61□□□□□ -1.35
USP47-206ENST00000525367 DNAJC25-GNG10A0A024R161 153 aa6.6□□□□□ -1.35
USP47-206ENST00000525367 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.6□□□□□ -1.35
USP47-206ENST00000525367 GSC2O15499 205 aa6.6□□□□□ -1.35
USP47-206ENST00000525367 RFPL3O75679 317 aa6.6□□□□□ -1.35
USP47-206ENST00000525367 FOSL1P15407 271 aa6.6□□□□□ -1.35
USP47-206ENST00000525367 GORABQ5T7V8 394 aa6.6□□□□□ -1.35
USP47-206ENST00000525367 CNNM4Q6P4Q7 775 aa6.6□□□□□ -1.35
USP47-206ENST00000525367 GSTCDQ8NEC7 633 aa6.6□□□□□ -1.35
USP47-206ENST00000525367 CCDC136Q96JN2 1154 aa6.6□□□□□ -1.35
USP47-206ENST00000525367 TARS2Q9BW92 718 aaKnown RBP6.6□□□□□ -1.35
USP47-206ENST00000525367 CDADC1Q9BWV3 514 aa6.6□□□□□ -1.35
USP47-206ENST00000525367 IRF2BPLQ9H1B7 796 aa6.6□□□□□ -1.35
USP47-206ENST00000525367 PDE8AO60658 829 aa6.59□□□□□ -1.35
USP47-206ENST00000525367 CPP00450 1065 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms