RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 FEZF2Q8TBJ5 459 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 TM9SF2Q99805 663 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 LUC7LQ9NQ29 371 aaKnown RBP3.12□□□□□ -1.91
CD44-212ENST00000524922 ZNF214Q9UL59 606 aaPredicted RBP3.12□□□□□ -1.91
CD44-212ENST00000524922 PPT2Q9UMR5 302 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 PCDHGB7Q9Y5F8 929 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 FHOD1Q9Y613 1164 aa3.12□□□□□ -1.91
CD44-212ENST00000524922 SSU72P8A0A1W2PR75 194 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 FAM86C2PA6NEL3 165 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 NUDT19A8MXV4 375 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 BUB1BO60566 1050 aaPredicted RBP3.11□□□□□ -1.91
CD44-212ENST00000524922 PPP1R11O60927 126 aaPredicted RBP3.11□□□□□ -1.91
CD44-212ENST00000524922 IFNGR1P15260 489 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 ITGAEP38570 1179 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 NFIXQ14938 502 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 METTL16Q86W50 562 aaKnown RBP3.11□□□□□ -1.91
CD44-212ENST00000524922 SMARCC1Q92922 1105 aaPredicted RBP3.11□□□□□ -1.91
CD44-212ENST00000524922 BRF1Q92994 677 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 DHRS1Q96LJ7 313 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 PWWP2AQ96N64 755 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 KLHL25Q9H0H3 589 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 SUSD2Q9UGT4 822 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 DDX41Q9UJV9 622 aaKnown RBP3.11□□□□□ -1.91
CD44-212ENST00000524922 FBXL21Q9UKT6 434 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 SMARCA2P51531 1590 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 THOC2Q8NI27 1593 aaKnown RBP3.11□□□□□ -1.91
CD44-212ENST00000524922 LAMC3Q9Y6N6 1575 aa3.11□□□□□ -1.91
CD44-212ENST00000524922 PEG3Q9GZU2 1588 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 A0A087WZG4 1122 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 RECKO95980 971 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 CYBBP04839 570 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 GSTM1P09488 218 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 GLI4P10075 376 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 IMPDH2P12268 514 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 GUCY2CP25092 1073 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 ZNF76P36508 570 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 ARL4AP40617 200 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 LIMS1P48059 325 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 SOX9P48436 509 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 CORO7P57737 925 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 ZNF200P98182 395 aaPredicted RBP3.1□□□□□ -1.91
CD44-212ENST00000524922 ZNF326Q5BKZ1 582 aaKnown RBP3.1□□□□□ -1.91
CD44-212ENST00000524922 PAQR3Q6TCH7 311 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 USP48Q86UV5 1035 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 FIBCD1Q8N539 461 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 TMEM87AQ8NBN3 555 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 FNIP1Q8TF40 1166 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 KLHL6Q8WZ60 621 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 PTCHD1Q96NR3 888 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 ADAM7Q9H2U9 754 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 METTL5Q9NRN9 209 aaKnown RBP3.1□□□□□ -1.91
CD44-212ENST00000524922 SCRIBQ14160 1630 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 PDS5BQ9NTI5 1447 aa3.1□□□□□ -1.91
CD44-212ENST00000524922 PRICKLE3O43900 615 aaPredicted RBP3.09□□□□□ -1.91
CD44-212ENST00000524922 SYN1P17600 705 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 SLURP1P55000 103 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 CHMP4BP1P59074 171 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 EFEMP1Q12805 493 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 NR1I3Q14994 352 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 HLA-DQA1Q5Y7H0 255 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 OLFML2BQ68BL8 750 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 RCSD1Q6JBY9 416 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 ZC3H14Q6PJT7 736 aaKnown RBP3.09□□□□□ -1.91
CD44-212ENST00000524922 CYP2R1Q6VVX0 501 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 FRMD5Q7Z6J6 570 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 SAPCD2Q86UD0 394 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 GGNQ86UU5 652 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 CCDC144CPQ8IYA2 1237 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 TEPSINQ96N21 525 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 MTA3Q9BTC8 594 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 PDLIM7Q9NR12 457 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 GINM1Q9NU53 330 aa3.09□□□□□ -1.91
CD44-212ENST00000524922 A0A1B0GTL3 188 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 SH3D21A4FU49 640 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 AURKAO14965 403 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 SASH1O94885 1247 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 TP53P04637 393 aaPredicted RBP3.08□□□□□ -1.92
CD44-212ENST00000524922 ASGR2P07307 311 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 VAMP1P23763 118 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 MC3RP41968 323 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 GIPRP48546 466 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 PRR5P85299 388 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 CYP4F3Q08477 520 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 TMEM62Q0P6H9 643 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 ZFYVE27Q5T4F4 411 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 LIPIQ6XZB0 460 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 SP8Q8IXZ3 490 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 ZDHHC14Q8IZN3 488 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 ADGRG2Q8IZP9 1017 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 ARHGEF39Q8N4T4 335 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 C19orf47Q8N9M1 422 aaKnown RBP3.08□□□□□ -1.92
CD44-212ENST00000524922 RASGRP4Q8TDF6 673 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 ZNF526Q8TF50 670 aaPredicted RBP3.08□□□□□ -1.92
CD44-212ENST00000524922 HAUS7Q99871 368 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 DSCC1Q9BVC3 393 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 NOL6Q9H6R4 1146 aaKnown RBP3.08□□□□□ -1.92
CD44-212ENST00000524922 FAM86C1Q9NVL1 165 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 ATAD2BQ9ULI0 1458 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 WDR62O43379 1518 aa3.08□□□□□ -1.92
CD44-212ENST00000524922 A0A1W2PQH9 124 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms