RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 DISC1Q9NRI5 854 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 H7C1D1 291 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 IPO7O95373 1038 aaKnown RBP14.7□□□□□ -0.06
CAPN1-202ENST00000524773 FAM153BP0C7A2 387 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 SCG2P13521 617 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 GUCY2FP51841 1108 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 CHRNDQ07001 517 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 FAM153CQ494X1 144 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 IQCA1Q86XH1 822 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 IFT81Q8WYA0 676 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 FAM153AQ9UHL3 310 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 PACSIN2Q9UNF0 486 aaPredicted RBP14.7□□□□□ -0.06
CAPN1-202ENST00000524773 KLRC4O43908 158 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 ERLIN2O94905 339 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 GOLGA8HP0CJ92 632 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 KLRK1P26718 216 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 KIF5AQ12840 1032 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 SF3A3Q12874 501 aaKnown RBP eCLIP14.69□□□□□ -0.068e-10■■■■□ 21.2
CAPN1-202ENST00000524773 CCDC42Q96M95 316 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 NOC4LQ9BVI4 516 aaKnown RBP14.69□□□□□ -0.06
CAPN1-202ENST00000524773 SLC39A2Q9NP94 309 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 EXOC1Q9NV70 894 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 MYH10P35580 1976 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 RTL9Q8NET4 1388 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 TRIM14Q14142 442 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 TTI2Q6NXR4 508 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 C4orf32Q8N8J7 132 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 VIPAS39Q9H9C1 493 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 ZNHIT6Q9NWK9 470 aaKnown RBP14.69□□□□□ -0.06
CAPN1-202ENST00000524773 GRIN2DO15399 1336 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 MROH5Q6ZUA9 1318 aa14.69□□□□□ -0.06
CAPN1-202ENST00000524773 CHD4Q14839 1912 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 MYO1FO00160 1098 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 UBA7P41226 1012 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 KRT83P78385 493 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 GUCY1A3Q02108 690 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 SLC51AQ86UW1 340 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 SPATA4Q8NEY3 305 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 AENQ8WTP8 325 aaKnown RBP14.68□□□□□ -0.06
CAPN1-202ENST00000524773 MMRN2Q9H8L6 949 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 ARHGAP20Q9P2F6 1191 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 PDS5AQ29RF7 1337 aaKnown RBP14.68□□□□□ -0.06
CAPN1-202ENST00000524773 BAZ2AQ9UIF9 1905 aaKnown RBP14.68□□□□□ -0.06
CAPN1-202ENST00000524773 EBAG9O00559 213 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 BACH1O14867 736 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 GNAT2P19087 354 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 CYLC1P35663 651 aaPredicted RBP14.68□□□□□ -0.06
CAPN1-202ENST00000524773 PDE4DQ08499 809 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 CCDC24Q8N4L8 307 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 IFIH1Q9BYX4 1025 aaKnown RBP14.68□□□□□ -0.06
CAPN1-202ENST00000524773 RBM12Q9NTZ6 932 aaKnown RBP14.68□□□□□ -0.06
CAPN1-202ENST00000524773 PNPLA7Q6ZV29 1317 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 NID2Q14112 1375 aa14.68□□□□□ -0.06
CAPN1-202ENST00000524773 ADAMTS2O95450 1211 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 SRGNP10124 158 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 CYP19A1P11511 503 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-202ENST00000524773 EIF4A3P38919 411 aaKnown RBP14.67□□□□□ -0.06
CAPN1-202ENST00000524773 GFPT1Q06210 699 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-202ENST00000524773 MSL3Q8N5Y2 521 aaKnown RBP14.67□□□□□ -0.06
CAPN1-202ENST00000524773 RIOK1Q9BRS2 568 aaKnown RBP14.67□□□□□ -0.06
CAPN1-202ENST00000524773 TTYH3Q9C0H2 523 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 CENPHQ9H3R5 247 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 DEF6Q9H4E7 631 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 FAM184BQ9ULE4 1060 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 SNX12Q9UMY4 172 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 COL14A1Q05707 1796 aaKnown RBP14.67□□□□□ -0.06
CAPN1-202ENST00000524773 BCL9LQ86UU0 1499 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 PSMA7O14818 248 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 PLCG1P19174 1290 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 ASIC1P78348 528 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 RASSF7Q02833 373 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 ARID5AQ03989 594 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 CKAP4Q07065 602 aaKnown RBP14.67□□□□□ -0.06
CAPN1-202ENST00000524773 DTHD1Q6ZMT9 781 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 HEATR3Q7Z4Q2 680 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 EFCAB13Q8IY85 973 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 GLIS3Q8NEA6 775 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 NUTM2BA6NNL0 878 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-202ENST00000524773 NUTM2EB1AL46 878 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-202ENST00000524773 TOM1O60784 492 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 CARSP49589 748 aaKnown RBP14.67□□□□□ -0.06
CAPN1-202ENST00000524773 SEC24CP53992 1094 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 SPA17Q15506 151 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 MIIPQ5JXC2 388 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 KCNV1Q6PIU1 500 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 DHX37Q8IY37 1157 aaKnown RBP14.67□□□□□ -0.06
CAPN1-202ENST00000524773 DYNLL2Q96FJ2 89 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 RMND1Q9NWS8 449 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 NFU1Q9UMS0 254 aa14.67□□□□□ -0.06
CAPN1-202ENST00000524773 MNAT1P51948 309 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 CT47A1Q5JQC4 288 aaPredicted RBP14.66□□□□□ -0.06
CAPN1-202ENST00000524773 CCDC181Q5TID7 509 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 C3orf67Q6ZVT6 689 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 RRAGAQ7L523 313 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 DYMQ7RTS9 669 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 BLIDQ8IZY5 108 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 ZIM3Q96PE6 472 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 OSBPL9Q96SU4 736 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 PCDHA13Q9Y5I0 950 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 A0A087WUV0 522 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms