RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 ARVCFO00192 962 aa19.2■□□□□ 0.66
HIF3A-208ENST00000524533 TIMP1P01033 207 aa19.2■□□□□ 0.66
HIF3A-208ENST00000524533 FGRP09769 529 aa19.2■□□□□ 0.66
HIF3A-208ENST00000524533 CDK7P50613 346 aa19.2■□□□□ 0.66
HIF3A-208ENST00000524533 BEX3Q00994 111 aa19.2■□□□□ 0.66
HIF3A-208ENST00000524533 NSMFQ6X4W1 530 aa19.2■□□□□ 0.66
HIF3A-208ENST00000524533 TLK2Q86UE8 772 aa19.2■□□□□ 0.66
HIF3A-208ENST00000524533 TICAM2Q86XR7 235 aa19.2■□□□□ 0.66
HIF3A-208ENST00000524533 CDX2Q99626 313 aaPredicted RBP19.2■□□□□ 0.66
HIF3A-208ENST00000524533 ASTN1O14525 1302 aa19.2■□□□□ 0.66
HIF3A-208ENST00000524533 CTAGE5O15320 804 aa19.19■□□□□ 0.66
HIF3A-208ENST00000524533 TLR3O15455 904 aaKnown RBP19.19■□□□□ 0.66
HIF3A-208ENST00000524533 FGAP02671 866 aa19.19■□□□□ 0.66
HIF3A-208ENST00000524533 ICAM1P05362 532 aa19.19■□□□□ 0.66
HIF3A-208ENST00000524533 TOP1P11387 765 aaKnown RBP19.19■□□□□ 0.66
HIF3A-208ENST00000524533 NKX3-2P78367 333 aa19.19■□□□□ 0.66
HIF3A-208ENST00000524533 NMIQ13287 307 aaPredicted RBP19.19■□□□□ 0.66
HIF3A-208ENST00000524533 RANBP17Q9H2T7 1088 aaKnown RBP19.19■□□□□ 0.66
HIF3A-208ENST00000524533 TTYH1Q9H313 450 aaPredicted RBP19.19■□□□□ 0.66
HIF3A-208ENST00000524533 CUL9Q8IWT3 2517 aa19.19■□□□□ 0.66
HIF3A-208ENST00000524533 LAMA4Q16363 1823 aa19.18■□□□□ 0.66
HIF3A-208ENST00000524533 TRIM6-TRIM34B2RNG4 842 aa19.18■□□□□ 0.66
HIF3A-208ENST00000524533 HSPD1P10809 573 aaKnown RBP19.18■□□□□ 0.66
HIF3A-208ENST00000524533 SLC16A2P36021 539 aa19.18■□□□□ 0.66
HIF3A-208ENST00000524533 SYDE2Q5VT97 1194 aa19.18■□□□□ 0.66
HIF3A-208ENST00000524533 TTBK2Q6IQ55 1244 aa19.18■□□□□ 0.66
HIF3A-208ENST00000524533 MFSD5Q6N075 450 aa19.18■□□□□ 0.66
HIF3A-208ENST00000524533 ZNF589Q86UQ0 364 aaPredicted RBP19.18■□□□□ 0.66
HIF3A-208ENST00000524533 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.18■□□□□ 0.66
HIF3A-208ENST00000524533 FBXO16Q8IX29 292 aaPredicted RBP19.18■□□□□ 0.66
HIF3A-208ENST00000524533 FAM126BQ8IXS8 530 aa19.18■□□□□ 0.66
HIF3A-208ENST00000524533 TMEM47Q9BQJ4 181 aa19.18■□□□□ 0.66
HIF3A-208ENST00000524533 LNPKQ9C0E8 428 aa19.18■□□□□ 0.66
HIF3A-208ENST00000524533 AP5M1Q9H0R1 490 aa19.18■□□□□ 0.66
HIF3A-208ENST00000524533 GNEQ9Y223 722 aaKnown RBP19.18■□□□□ 0.66
HIF3A-208ENST00000524533 DDX49Q9Y6V7 483 aaKnown RBP19.18■□□□□ 0.66
HIF3A-208ENST00000524533 FRMPD2Q68DX3 1309 aaPredicted RBP19.18■□□□□ 0.66
HIF3A-208ENST00000524533 CCDC171Q6TFL3 1326 aa19.18■□□□□ 0.66
HIF3A-208ENST00000524533 TMEM265A0A087WTH1 108 aa19.17■□□□□ 0.66
HIF3A-208ENST00000524533 HAND2P61296 217 aa19.17■□□□□ 0.66
HIF3A-208ENST00000524533 PPIGQ13427 754 aaKnown RBP eCLIP19.17■□□□□ 0.66
HIF3A-208ENST00000524533 FSCN1Q16658 493 aaKnown RBP19.17■□□□□ 0.66
HIF3A-208ENST00000524533 BTNL9Q6UXG8 535 aa19.17■□□□□ 0.66
HIF3A-208ENST00000524533 EEPD1Q7L9B9 569 aa19.17■□□□□ 0.66
HIF3A-208ENST00000524533 MYLIPQ8WY64 445 aa19.17■□□□□ 0.66
HIF3A-208ENST00000524533 RILPL2Q969X0 211 aa19.17■□□□□ 0.66
HIF3A-208ENST00000524533 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.17■□□□□ 0.66
HIF3A-208ENST00000524533 TCP11L1Q9NUJ3 509 aa19.17■□□□□ 0.66
HIF3A-208ENST00000524533 CABYRO75952 493 aa19.16■□□□□ 0.66
HIF3A-208ENST00000524533 SMPD1P17405 629 aa19.16■□□□□ 0.66
HIF3A-208ENST00000524533 CXCL17Q6UXB2 119 aa19.16■□□□□ 0.66
HIF3A-208ENST00000524533 TMEM199Q8N511 208 aa19.16■□□□□ 0.66
HIF3A-208ENST00000524533 PPP1R12CQ9BZL4 782 aa19.16■□□□□ 0.66
HIF3A-208ENST00000524533 VTA1Q9NP79 307 aa19.16■□□□□ 0.66
HIF3A-208ENST00000524533 GPCPD1Q9NPB8 672 aa19.16■□□□□ 0.66
HIF3A-208ENST00000524533 PDGFCQ9NRA1 345 aa19.16■□□□□ 0.66
HIF3A-208ENST00000524533 ADD3Q9UEY8 706 aaKnown RBP19.16■□□□□ 0.66
HIF3A-208ENST00000524533 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.15■□□□□ 0.66
HIF3A-208ENST00000524533 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.15■□□□□ 0.66
HIF3A-208ENST00000524533 DYNC1LI2O43237 492 aaPredicted RBP19.15■□□□□ 0.66
HIF3A-208ENST00000524533 ZEB2O60315 1214 aa19.15■□□□□ 0.66
HIF3A-208ENST00000524533 PTGS1P23219 599 aa19.15■□□□□ 0.66
HIF3A-208ENST00000524533 DNAJB2P25686 324 aa19.15■□□□□ 0.66
HIF3A-208ENST00000524533 AAMPQ13685 434 aa19.15■□□□□ 0.66
HIF3A-208ENST00000524533 AKNAD1Q5T1N1 836 aa19.15■□□□□ 0.66
HIF3A-208ENST00000524533 IQSEC1Q6DN90 963 aa19.15■□□□□ 0.66
HIF3A-208ENST00000524533 TAPT1Q6NXT6 567 aa19.15■□□□□ 0.66
HIF3A-208ENST00000524533 MFSD6Q6ZSS7 791 aa19.15■□□□□ 0.66
HIF3A-208ENST00000524533 MAFAQ8NHW3 353 aaPredicted RBP19.15■□□□□ 0.66
HIF3A-208ENST00000524533 MORC4Q8TE76 937 aa19.15■□□□□ 0.66
HIF3A-208ENST00000524533 PURBQ96QR8 312 aaKnown RBP19.15■□□□□ 0.66
HIF3A-208ENST00000524533 EYSQ5T1H1 3165 aa19.14■□□□□ 0.66
HIF3A-208ENST00000524533 NFIBO00712 420 aa19.14■□□□□ 0.65
HIF3A-208ENST00000524533 CD4P01730 458 aa19.14■□□□□ 0.65
HIF3A-208ENST00000524533 PDHBP11177 359 aa19.14■□□□□ 0.65
HIF3A-208ENST00000524533 PCP11498 1178 aaKnown RBP19.14■□□□□ 0.65
HIF3A-208ENST00000524533 FOSL2P15408 326 aa19.14■□□□□ 0.65
HIF3A-208ENST00000524533 CSF2RAP15509 400 aa19.14■□□□□ 0.65
HIF3A-208ENST00000524533 ALDH5A1P51649 535 aaPredicted RBP19.14■□□□□ 0.65
HIF3A-208ENST00000524533 MFAP1P55081 439 aaKnown RBP19.14■□□□□ 0.65
HIF3A-208ENST00000524533 BAATQ14032 418 aaPredicted RBP19.14■□□□□ 0.65
HIF3A-208ENST00000524533 TBC1D10CQ8IV04 446 aa19.14■□□□□ 0.65
HIF3A-208ENST00000524533 Q9Y3F1 56 aa19.14■□□□□ 0.65
HIF3A-208ENST00000524533 CDH23Q9H251 3354 aa19.14■□□□□ 0.65
HIF3A-208ENST00000524533 PTPDC1A2A3K4 754 aa19.13■□□□□ 0.65
HIF3A-208ENST00000524533 ITGA7Q13683 1181 aa19.13■□□□□ 0.65
HIF3A-208ENST00000524533 B4GALNT3Q6L9W6 998 aa19.13■□□□□ 0.65
HIF3A-208ENST00000524533 PSRC1Q6PGN9 363 aaPredicted RBP19.13■□□□□ 0.65
HIF3A-208ENST00000524533 SLC30A10Q6XR72 485 aa19.13■□□□□ 0.65
HIF3A-208ENST00000524533 KIAA1211Q6ZU35 1233 aa19.13■□□□□ 0.65
HIF3A-208ENST00000524533 SMC5Q8IY18 1101 aa19.13■□□□□ 0.65
HIF3A-208ENST00000524533 SLC43A3Q8NBI5 491 aa19.13■□□□□ 0.65
HIF3A-208ENST00000524533 TTC14Q96N46 770 aa19.13■□□□□ 0.65
HIF3A-208ENST00000524533 RWDD1Q9H446 243 aaPredicted RBP19.13■□□□□ 0.65
HIF3A-208ENST00000524533 RNF41Q9H4P4 317 aaPredicted RBP19.13■□□□□ 0.65
HIF3A-208ENST00000524533 PNMA2Q9UL42 364 aa19.13■□□□□ 0.65
HIF3A-208ENST00000524533 NEDD4P46934 1319 aa19.12■□□□□ 0.65
HIF3A-208ENST00000524533 LOC102724159A0A0B4J2E5 919 aa19.12■□□□□ 0.65
HIF3A-208ENST00000524533 SDSP20132 328 aa19.12■□□□□ 0.65
HIF3A-208ENST00000524533 ZNF543Q08ER8 600 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms