RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	ZNF70	Q9UC06	446 aa	Predicted RBP	8.94	□□□□□ -0.98
SPIDR-223	ENST00000524033	SLC27A5	Q9Y2P5	690 aa		8.94	□□□□□ -0.98
SPIDR-223	ENST00000524033	ZMYM6	O95789	1325 aa		8.94	□□□□□ -0.98
SPIDR-223	ENST00000524033		A0A1B0GUL6	1792 aa		8.94	□□□□□ -0.98
SPIDR-223	ENST00000524033	MYH13	Q9UKX3	1938 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	SCN9A	Q15858	1988 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	KLF18	A0A0U1RQI7	1052 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	MANSC4	A6NHS7	340 aa	Predicted RBP	8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	GOLGA8B	A8MQT2	603 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	TCP10L2	B9ZVM9	353 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	FANCG	O15287	622 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	CCP110	O43303	1012 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	USP2	O75604	605 aa	Predicted RBP	8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	ALDH1A1	P00352	501 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	ZBTB48	P10074	688 aa	Predicted RBP	8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	SFPQ	P23246	707 aa	Known RBP eCLIP	8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	CRK	P46108	304 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	ETF1	P62495	437 aa	Known RBP	8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	TPM4	P67936	248 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	PUM3	Q15397	648 aa	Known RBP	8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	PKN2	Q16513	984 aa	Known RBP	8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	VSTM4	Q8IW00	320 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	VGLL2	Q8N8G2	317 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	ZNF296	Q8WUU4	475 aa	Predicted RBP	8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	ZNF592	Q92610	1267 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	SYMPK	Q92797	1274 aa	Known RBP	8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	CLMN	Q96JQ2	1002 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	MAP3K14	Q99558	947 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	MRI	Q9BWK5	157 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	FHOD1	Q9Y613	1164 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	STK36	Q9NRP7	1315 aa		8.93	□□□□□ -0.98
SPIDR-223	ENST00000524033	TRPM7	Q96QT4	1865 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	GPR25	O00155	361 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	SH2B2	O14492	632 aa	Predicted RBP	8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	CBFA2T2	O43439	604 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	SMC2	O95347	1197 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	FGFR2	P21802	821 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	PLA2G4A	P47712	749 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	TNNI2	P48788	182 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	COPS2	P61201	443 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	TIMM10	P62072	90 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	HDLBP	Q00341	1268 aa	Known RBP	8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	GRIK5	Q16478	980 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	IMMT	Q16891	758 aa	Known RBP	8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	LRRFIP1	Q32MZ4	808 aa	Known RBP	8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	NOM1	Q5C9Z4	860 aa	Known RBP	8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	RESP18	Q5W5W9	173 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	SHC4	Q6S5L8	630 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	SYT10	Q6XYQ8	523 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	ANKRD13A	Q8IZ07	590 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	PRR7	Q8TB68	274 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	LPIN2	Q92539	896 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	TEKT1	Q969V4	418 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	SDF4	Q9BRK5	362 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	SRRT	Q9BXP5	876 aa	Known RBP	8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	INTS13	Q9NVM9	706 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	DNAI1	Q9UI46	699 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033		V9GYY5	206 aa	Predicted RBP	8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	CENPF	P49454	3210 aa		8.92	□□□□□ -0.98
SPIDR-223	ENST00000524033	HTT	P42858	3142 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	COL1A1	P02452	1464 aa	Predicted RBP	8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	ATP8B1	O43520	1251 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	DHX16	O60231	1041 aa	Known RBP	8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	CUTA	O60888	179 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	FKTN	O75072	461 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	FMNL1	O95466	1100 aa	Predicted RBP	8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	FGA	P02671	866 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	PNMA6A	P0CW24	399 aa	Predicted RBP	8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	SLC5A1	P13866	664 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	ADORA1	P30542	326 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	MYL5	Q02045	173 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	BMS1	Q14692	1282 aa	Known RBP	8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	BLOC1S3	Q6QNY0	202 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	ZNF771	Q7L3S4	317 aa	Predicted RBP	8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	CHST3	Q7LGC8	479 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	METTL16	Q86W50	562 aa	Known RBP	8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	NCOA7	Q8NI08	942 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	WNK4	Q96J92	1243 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	ZNF512B	Q96KM6	892 aa	Predicted RBP	8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	ZDHHC15	Q96MV8	337 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	TEPSIN	Q96N21	525 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	CFHR5	Q9BXR6	569 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	TMEM39B	Q9GZU3	492 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	R3HDML	Q9H3Y0	253 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	CEP126	Q9P2H0	1117 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	SUGT1	Q9Y2Z0	365 aa		8.91	□□□□□ -0.98
SPIDR-223	ENST00000524033	VWA3A	A6NCI4	1184 aa		8.9	□□□□□ -0.98
SPIDR-223	ENST00000524033	NRDC	O43847	1150 aa		8.9	□□□□□ -0.98
SPIDR-223	ENST00000524033	ATP1A3	P13637	1013 aa		8.9	□□□□□ -0.98
SPIDR-223	ENST00000524033	ZNF18	P17022	549 aa		8.9	□□□□□ -0.98
SPIDR-223	ENST00000524033	ADD2	P35612	726 aa		8.9	□□□□□ -0.98
SPIDR-223	ENST00000524033	CACNB3	P54284	484 aa		8.9	□□□□□ -0.98
SPIDR-223	ENST00000524033	SF3A1	Q15459	793 aa	Known RBP	8.9	□□□□□ -0.98
SPIDR-223	ENST00000524033	ALX1	Q15699	326 aa		8.9	□□□□□ -0.98
SPIDR-223	ENST00000524033	NTRK3	Q16288	839 aa		8.9	□□□□□ -0.98
SPIDR-223	ENST00000524033	ERCC6L	Q2NKX8	1250 aa		8.9	□□□□□ -0.98
SPIDR-223	ENST00000524033	KRT40	Q6A162	431 aa		8.9	□□□□□ -0.98
SPIDR-223	ENST00000524033	APOBEC3H	Q6NTF7	200 aa	Known RBP	8.9	□□□□□ -0.98
SPIDR-223	ENST00000524033	CYB5R4	Q7L1T6	521 aa		8.9	□□□□□ -0.98

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms