RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 JAKMIP3Q5VZ66 844 aa12.16□□□□□ -0.46
SPIDR-222ENST00000524006 KLHL10Q6JEL2 608 aa12.16□□□□□ -0.46
SPIDR-222ENST00000524006 CHADLQ6NUI6 762 aa12.16□□□□□ -0.46
SPIDR-222ENST00000524006 CLEC10AQ8IUN9 316 aa12.16□□□□□ -0.46
SPIDR-222ENST00000524006 FOXP4Q8IVH2 680 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-222ENST00000524006 CALML4Q96GE6 196 aa12.16□□□□□ -0.46
SPIDR-222ENST00000524006 GTPBP4Q9BZE4 634 aaKnown RBP12.16□□□□□ -0.46
SPIDR-222ENST00000524006 CPVLQ9H3G5 476 aa12.16□□□□□ -0.46
SPIDR-222ENST00000524006 KCNF1Q9H3M0 494 aa12.16□□□□□ -0.46
SPIDR-222ENST00000524006 CUEDC2Q9H467 287 aa12.16□□□□□ -0.46
SPIDR-222ENST00000524006 RIOX1Q9H6W3 641 aa12.16□□□□□ -0.46
SPIDR-222ENST00000524006 ARHGEF10LQ9HCE6 1279 aa12.16□□□□□ -0.46
SPIDR-222ENST00000524006 MYL1P05976 194 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 TPM1P09493 284 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 NOVP48745 357 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 TERF1P54274 439 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 TRAF1Q13077 416 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 DLGAP5Q15398 846 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 CALCRLQ16602 461 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 SLFN13Q68D06 897 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 USP49Q70CQ1 688 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 RASGRP2Q7LDG7 609 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 CCDC112Q8NEF3 446 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 KIAA1524Q8TCG1 905 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 DISC1Q9NRI5 854 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 SPTLC3Q9NUV7 552 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 NYAP2Q9P242 653 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 BIN2Q9UBW5 565 aaPredicted RBP12.15□□□□□ -0.46
SPIDR-222ENST00000524006 NRBP1Q9UHY1 535 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 PYCARDQ9ULZ3 195 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 CTNND2Q9UQB3 1225 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 NFE2L3Q9Y4A8 694 aa12.15□□□□□ -0.46
SPIDR-222ENST00000524006 DICER1Q9UPY3 1922 aaKnown RBP12.15□□□□□ -0.46
SPIDR-222ENST00000524006 WNT7AO00755 349 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 ZBTB5O15062 677 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 SNHG28P0DPA3 235 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 SKILP12757 684 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 MDM2Q00987 491 aaPredicted RBP12.14□□□□□ -0.47
SPIDR-222ENST00000524006 AMPD3Q01432 767 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 DPYDQ12882 1025 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 MCTP2Q6DN12 878 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 TYW1BQ6NUM6 668 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 RSBN1LQ6PCB5 846 aaPredicted RBP12.14□□□□□ -0.47
SPIDR-222ENST00000524006 CABP7Q86V35 215 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 TRMT44Q8IYL2 757 aaKnown RBP12.14□□□□□ -0.47
SPIDR-222ENST00000524006 ADGRF4Q8IZF3 695 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 ENOX1Q8TC92 643 aaKnown RBP12.14□□□□□ -0.47
SPIDR-222ENST00000524006 TBCKQ8TEA7 893 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 L3MBTL3Q96JM7 780 aaPredicted RBP12.14□□□□□ -0.47
SPIDR-222ENST00000524006 PRIMPOLQ96LW4 560 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 CTAGE1Q96RT6 745 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 CSRNP1Q96S65 589 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 PSMD1Q99460 953 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 TDRD3Q9H7E2 651 aaKnown RBP12.14□□□□□ -0.47
SPIDR-222ENST00000524006 RIC8AQ9NPQ8 531 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 HERC5Q9UII4 1024 aaKnown RBP12.14□□□□□ -0.47
SPIDR-222ENST00000524006 ATRNL1Q5VV63 1379 aa12.14□□□□□ -0.47
SPIDR-222ENST00000524006 DOCK1Q14185 1865 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 FAM196BA6NMK8 535 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 M0R2N6 131 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 RPN1P04843 607 aaKnown RBP12.13□□□□□ -0.47
SPIDR-222ENST00000524006 EEF2P13639 858 aaKnown RBP12.13□□□□□ -0.47
SPIDR-222ENST00000524006 GCFC2P16383 781 aaKnown RBP12.13□□□□□ -0.47
SPIDR-222ENST00000524006 SARSP49591 514 aaKnown RBP12.13□□□□□ -0.47
SPIDR-222ENST00000524006 SPAG1Q07617 926 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 LRMPQ12912 555 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 NCAPHQ15003 741 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 KARSQ15046 597 aaKnown RBP12.13□□□□□ -0.47
SPIDR-222ENST00000524006 CCDC144BQ3MJ40 725 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 KCTD1Q719H9 257 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 LRRC8AQ8IWT6 810 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 C17orf53Q8N3J3 647 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-222ENST00000524006 COA7Q96BR5 231 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 CCSER1Q9C0I3 900 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 TAF1DQ9H5J8 278 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-222ENST00000524006 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.13□□□□□ -0.47
SPIDR-222ENST00000524006 VEZTQ9HBM0 779 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 KCNQ5Q9NR82 932 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 ZNF277Q9NRM2 450 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-222ENST00000524006 EXOC1Q9NV70 894 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 FANCLQ9NW38 375 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 FAM198AQ9UFP1 575 aa12.13□□□□□ -0.47
SPIDR-222ENST00000524006 PASKQ96RG2 1323 aa12.12□□□□□ -0.47
SPIDR-222ENST00000524006 ZNF541Q9H0D2 1346 aa12.12□□□□□ -0.47
SPIDR-222ENST00000524006 A0A087X0B3 334 aa12.12□□□□□ -0.47
SPIDR-222ENST00000524006 DDTLA6NHG4 134 aaPredicted RBP12.12□□□□□ -0.47
SPIDR-222ENST00000524006 KIF2AO00139 706 aaPredicted RBP12.12□□□□□ -0.47
SPIDR-222ENST00000524006 ABCB7O75027 752 aa12.12□□□□□ -0.47
SPIDR-222ENST00000524006 RAD17O75943 681 aa12.12□□□□□ -0.47
SPIDR-222ENST00000524006 GDF11O95390 407 aa12.12□□□□□ -0.47
SPIDR-222ENST00000524006 PPP1R2P41236 205 aa12.12□□□□□ -0.47
SPIDR-222ENST00000524006 PAK1Q13153 545 aa12.12□□□□□ -0.47
SPIDR-222ENST00000524006 SEMA3FQ13275 785 aa12.12□□□□□ -0.47
SPIDR-222ENST00000524006 SEPT2Q15019 361 aa12.12□□□□□ -0.47
SPIDR-222ENST00000524006 CDC37Q16543 378 aaPredicted RBP12.12□□□□□ -0.47
SPIDR-222ENST00000524006 SLC35G1Q2M3R5 365 aa12.12□□□□□ -0.47
SPIDR-222ENST00000524006 SPATA1Q5VX52 437 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms