RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 MTMR8Q96EF0 704 aa14.9□□□□□ -0.02
VEGFA-224ENST00000523873 IL17RAQ96F46 866 aa14.9□□□□□ -0.02
VEGFA-224ENST00000523873 A1CFQ9NQ94 594 aaKnown RBP14.9□□□□□ -0.02
VEGFA-224ENST00000523873 FAM217BQ9NTX9 383 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-224ENST00000523873 BIN2Q9UBW5 565 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-224ENST00000523873 ZBTB5O15062 677 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 INHAP05111 366 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 METAP2P50579 478 aaKnown RBP eCLIP14.89□□□□□ -0.037e-12■□□□□ 8.9
VEGFA-224ENST00000523873 CCT2P78371 535 aaKnown RBP14.89□□□□□ -0.03
VEGFA-224ENST00000523873 MTFR1Q15390 333 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 NSMFQ6X4W1 530 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 FBXO11Q86XK2 927 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 ABRAQ8N0Z2 381 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 ANKRD35Q8N283 1001 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 FBXL16Q8N461 479 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 SLAIN1Q8ND83 568 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 PXYLP1Q8TE99 480 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 CLEC4DQ8WXI8 215 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 ARMC5Q96C12 935 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 DDX11Q96FC9 970 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 PURBQ96QR8 312 aaKnown RBP14.89□□□□□ -0.03
VEGFA-224ENST00000523873 KIF2CQ99661 725 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 FBXO40Q9UH90 709 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 CNTNAP5Q8WYK1 1306 aa14.89□□□□□ -0.03
VEGFA-224ENST00000523873 CCDC85CA6NKD9 419 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 PPFIA3O75145 1194 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 HOXC6P09630 235 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 XRCC5P13010 732 aaKnown RBP14.88□□□□□ -0.03
VEGFA-224ENST00000523873 PDIA3P30101 505 aaKnown RBP14.88□□□□□ -0.03
VEGFA-224ENST00000523873 GNAQP50148 359 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 AK2P54819 239 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 CNTN2Q02246 1040 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 STK3Q13188 491 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 ZNF792Q3KQV3 632 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 SLC30A10Q6XR72 485 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 TBC1D5Q92609 795 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 ZNF333Q96JL9 665 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 FGD4Q96M96 766 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 SPZ1Q9BXG8 430 aa14.88□□□□□ -0.03
VEGFA-224ENST00000523873 NCOA5Q9HCD5 579 aaKnown RBP14.88□□□□□ -0.03
VEGFA-224ENST00000523873 KIAA0100Q14667 2235 aaKnown RBP14.87□□□□□ -0.03
VEGFA-224ENST00000523873 DNAJC25-GNG10A0A024R161 153 aa14.87□□□□□ -0.03
VEGFA-224ENST00000523873 CAPN15O75808 1086 aa14.87□□□□□ -0.03
VEGFA-224ENST00000523873 CYP2C19P33261 490 aa14.87□□□□□ -0.03
VEGFA-224ENST00000523873 ADD1P35611 737 aaKnown RBP14.87□□□□□ -0.03
VEGFA-224ENST00000523873 RBM25P49756 843 aaKnown RBP14.87□□□□□ -0.03
VEGFA-224ENST00000523873 NEK4P51957 841 aa14.87□□□□□ -0.03
VEGFA-224ENST00000523873 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.87□□□□□ -0.035e-6■□□□□ 9.9
VEGFA-224ENST00000523873 RRP36Q96EU6 259 aaKnown RBP14.87□□□□□ -0.03
VEGFA-224ENST00000523873 MAML3Q96JK9 1138 aa14.87□□□□□ -0.03
VEGFA-224ENST00000523873 LZTS2Q9BRK4 669 aa14.87□□□□□ -0.03
VEGFA-224ENST00000523873 AMNQ9BXJ7 453 aa14.87□□□□□ -0.03
VEGFA-224ENST00000523873 BACH2Q9BYV9 841 aa14.87□□□□□ -0.03
VEGFA-224ENST00000523873 UNC93B1Q9H1C4 597 aa14.87□□□□□ -0.03
VEGFA-224ENST00000523873 RBM28Q9NW13 759 aaKnown RBP14.87□□□□□ -0.03
VEGFA-224ENST00000523873 CYP39A1Q9NYL5 469 aa14.87□□□□□ -0.03
VEGFA-224ENST00000523873 DDX49Q9Y6V7 483 aaKnown RBP14.87□□□□□ -0.03
VEGFA-224ENST00000523873 KIAA1217Q5T5P2 1943 aa14.87□□□□□ -0.03
VEGFA-224ENST00000523873 ABCB11O95342 1321 aa14.87□□□□□ -0.03
VEGFA-224ENST00000523873 NID2Q14112 1375 aa14.86□□□□□ -0.03
VEGFA-224ENST00000523873 PNMA6FA0A0J9YX94 578 aa14.86□□□□□ -0.03
VEGFA-224ENST00000523873 PTPDC1A2A3K4 754 aa14.86□□□□□ -0.03
VEGFA-224ENST00000523873 DTNBO60941 627 aa14.86□□□□□ -0.03
VEGFA-224ENST00000523873 HMGCRP04035 888 aa14.86□□□□□ -0.03
VEGFA-224ENST00000523873 SOX10P56693 466 aa14.86□□□□□ -0.03
VEGFA-224ENST00000523873 EVCP57679 992 aa14.86□□□□□ -0.03
VEGFA-224ENST00000523873 FUT2Q10981 343 aa14.86□□□□□ -0.03
VEGFA-224ENST00000523873 BAATQ14032 418 aaPredicted RBP14.86□□□□□ -0.03
VEGFA-224ENST00000523873 TPCN1Q9ULQ1 816 aa14.86□□□□□ -0.03
VEGFA-224ENST00000523873 PCDHA1Q9Y5I3 950 aa14.86□□□□□ -0.03
VEGFA-224ENST00000523873 ASTN1O14525 1302 aa14.86□□□□□ -0.03
VEGFA-224ENST00000523873 SOWAHBA6NEL2 793 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 POTEB2H3BUK9 544 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 OPLAHO14841 1288 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 LARGE1O95461 756 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 CALML3P27482 149 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 SMARCA1P28370 1054 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 RCAN1P53805 252 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 UBXN2AP68543 259 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 CACNB2Q08289 660 aaPredicted RBP14.85□□□□□ -0.03
VEGFA-224ENST00000523873 PRAMEF19Q5SWL8 479 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 RNF207Q6ZRF8 634 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 FAM133AQ8N9E0 248 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 GPKOWQ92917 476 aaPredicted RBP eCLIP14.85□□□□□ -0.039e-7■□□□□ 11
VEGFA-224ENST00000523873 UPF2Q9HAU5 1272 aaKnown RBP14.85□□□□□ -0.03
VEGFA-224ENST00000523873 SLC5A4Q9NY91 659 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 SEC63Q9UGP8 760 aaKnown RBP14.85□□□□□ -0.03
VEGFA-224ENST00000523873 PNMA2Q9UL42 364 aa14.85□□□□□ -0.03
VEGFA-224ENST00000523873 IGHA2P01877 340 aa14.84□□□□□ -0.03
VEGFA-224ENST00000523873 CCL5P13501 91 aa14.84□□□□□ -0.03
VEGFA-224ENST00000523873 PRKAR2AP13861 404 aaKnown RBP14.84□□□□□ -0.03
VEGFA-224ENST00000523873 CCND3P30281 292 aaPredicted RBP14.84□□□□□ -0.03
VEGFA-224ENST00000523873 RPS6P62753 249 aaKnown RBP14.84□□□□□ -0.03
VEGFA-224ENST00000523873 MFSD14CQ5VZR4 134 aa14.84□□□□□ -0.03
VEGFA-224ENST00000523873 OLFML2BQ68BL8 750 aa14.84□□□□□ -0.03
VEGFA-224ENST00000523873 TRPV1Q8NER1 839 aa14.84□□□□□ -0.03
VEGFA-224ENST00000523873 PHKBQ93100 1093 aa14.84□□□□□ -0.03
VEGFA-224ENST00000523873 ALDH8A1Q9H2A2 487 aaPredicted RBP14.84□□□□□ -0.03
VEGFA-224ENST00000523873 COL20A1Q9P218 1284 aa14.84□□□□□ -0.03
VEGFA-224ENST00000523873 MRPL11Q9Y3B7 192 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms