RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 STRBPQ96SI9 672 aaKnown RBP9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 NOC4LQ9BVI4 516 aaKnown RBP9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 KATNBL1Q9H079 304 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 ACAD9Q9H845 621 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 COG6Q9Y2V7 657 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 PCDHA11Q9Y5I1 949 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 NCOR1O75376 2440 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 ASTN1O14525 1302 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 BAZ2AQ9UIF9 1905 aaKnown RBP9.46□□□□□ -0.89
NSMCE2-213ENST00000523824 IGKV6D-41A0A0C4DH26 115 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 SOWAHBA6NEL2 793 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 GSG1L2A8MUP6 293 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 TMEM232C9JQI7 657 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 B4GALT4O60513 344 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 PRDM1O75626 825 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 TTLL1O95922 423 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 MS4A1P11836 297 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 ATP2A2P16615 1042 aaKnown RBP9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 SMPD1P17405 629 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 PSMC6P62333 389 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 IKQ13123 557 aaPredicted RBP9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 SLFN13Q68D06 897 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 IQSEC1Q6DN90 963 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 LRRC47Q8N1G4 583 aaKnown RBP9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 GMCL1P1Q8NEA9 526 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 SPDYE1Q8NFV5 336 aaPredicted RBP9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 CHURC1Q8WUH1 139 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 CEP95Q96GE4 821 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 SCLYQ96I15 445 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 TRERF1Q96PN7 1200 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 RNF146Q9NTX7 359 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 MTMR4Q9NYA4 1195 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 GNEQ9Y223 722 aaKnown RBP9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 GRIN2DO15399 1336 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 MYO9BQ13459 2157 aa9.46□□□□□ -0.9
NSMCE2-213ENST00000523824 RFXAPO00287 272 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 ERC2O15083 957 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 APPP05067 770 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 SUPT20HL2P0C7V6 817 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 ALAS1P13196 640 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 TDO2P48775 406 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 KCNQ1P51787 676 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 STAT2P52630 851 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 TKFCQ3LXA3 575 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 TMEM67Q5HYA8 995 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 KIAA1211Q6ZU35 1233 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 EEPD1Q7L9B9 569 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 DEFB128Q7Z7B8 93 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 FAM160B2Q86V87 743 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 SIRT2Q8IXJ6 389 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 CHMP4CQ96CF2 233 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 AGBL1Q96MI9 1066 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 WNT8AQ9H1J5 351 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 CERS4Q9HA82 394 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 A1CFQ9NQ94 594 aaKnown RBP9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 PDGFCQ9NRA1 345 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 SYNPO2Q9UMS6 1093 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 Q9Y3F1 56 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 MTCH2Q9Y6C9 303 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 XIRP2A4UGR9 3374 aa9.45□□□□□ -0.9
NSMCE2-213ENST00000523824 CA3P07451 260 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 PFKMP08237 780 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 TSPY3P0CV98 308 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 TSPY8P0CW00 308 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 ACTN1P12814 892 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 GNAT2P19087 354 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 POU3F3P20264 500 aaPredicted RBP9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 PTGS1P23219 599 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 HNRNPUQ00839 825 aaKnown RBP eCLIP9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 TTLL4Q14679 1199 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 TAPT1Q6NXT6 567 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 FBXO16Q8IX29 292 aaPredicted RBP9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 STAG1Q8WVM7 1258 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 OSBP2Q969R2 916 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 LRRCC1Q9C099 1032 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 ALDH8A1Q9H2A2 487 aaPredicted RBP9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 POLR3EQ9NVU0 708 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 COG5Q9UP83 839 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 HCN4Q9Y3Q4 1203 aa9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 DDX49Q9Y6V7 483 aaKnown RBP9.44□□□□□ -0.9
NSMCE2-213ENST00000523824 ZNF536O15090 1300 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 TNKSO95271 1327 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 KIF28PB7ZC32 967 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 PATL2C9JE40 543 aaKnown RBP9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 RNF113AO15541 343 aaKnown RBP9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 GPAA1O43292 621 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 SMARCA5O60264 1052 aaPredicted RBP9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 SLC3A2P08195 630 aaKnown RBP9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 MYL3P08590 195 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 CYP2C9P11712 490 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 MCCP23508 829 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 SLC1A4P43007 532 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 TFAP4Q01664 338 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 PDE4BQ07343 736 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 TMEM63BQ5T3F8 832 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 KBTBD3Q8NAB2 608 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 RETREG2Q8NC44 543 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 NEDD1Q8NHV4 660 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 ARNTL2Q8WYA1 636 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 APPBP2Q92624 585 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms