RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 TMEM52Q8NDY8 209 aa8.94□□□□□ -0.98
CPNE3-206ENST00000523469 MYLIPQ8WY64 445 aa8.94□□□□□ -0.98
CPNE3-206ENST00000523469 AARSD1Q9BTE6 412 aaKnown RBP8.94□□□□□ -0.98
CPNE3-206ENST00000523469 CWC22Q9HCG8 908 aaKnown RBP8.94□□□□□ -0.98
CPNE3-206ENST00000523469 TRBV23OR9-2A0A075B6M9 112 aa8.93□□□□□ -0.98
CPNE3-206ENST00000523469 A0A1W2PQ45 241 aaPredicted RBP8.93□□□□□ -0.98
CPNE3-206ENST00000523469 A0A1W2PQY0 241 aa8.93□□□□□ -0.98
CPNE3-206ENST00000523469 USP2O75604 605 aaPredicted RBP8.93□□□□□ -0.98
CPNE3-206ENST00000523469 CPP00450 1065 aa8.93□□□□□ -0.98
CPNE3-206ENST00000523469 SCG5P05408 212 aa8.93□□□□□ -0.98
CPNE3-206ENST00000523469 SNRPB2P08579 225 aaKnown RBP8.93□□□□□ -0.98
CPNE3-206ENST00000523469 ERVFC1P60507 584 aa8.93□□□□□ -0.98
CPNE3-206ENST00000523469 SLC14A2Q15849 920 aa8.93□□□□□ -0.98
CPNE3-206ENST00000523469 CEP128Q6ZU80 1094 aa8.93□□□□□ -0.98
CPNE3-206ENST00000523469 DNAJC7Q99615 494 aa8.93□□□□□ -0.98
CPNE3-206ENST00000523469 SP110Q9HB58 689 aa8.93□□□□□ -0.98
CPNE3-206ENST00000523469 ARHGEF4Q9NR80 690 aa8.93□□□□□ -0.98
CPNE3-206ENST00000523469 DIAPH1O60610 1272 aaKnown RBP8.92□□□□□ -0.98
CPNE3-206ENST00000523469 ITGB5P18084 799 aa8.92□□□□□ -0.98
CPNE3-206ENST00000523469 GRIA2P42262 883 aa8.92□□□□□ -0.98
CPNE3-206ENST00000523469 CEBPAP49715 358 aaPredicted RBP8.92□□□□□ -0.98
CPNE3-206ENST00000523469 RTP1P59025 263 aa8.92□□□□□ -0.98
CPNE3-206ENST00000523469 SHROOM4Q9ULL8 1493 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 KDM2BQ8NHM5 1336 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 TRAV20A0A0B4J274 112 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 NRDCO43847 1150 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 THBDP07204 575 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 FGFR1P11362 822 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 JUNBP17275 347 aaPredicted RBP8.91□□□□□ -0.98
CPNE3-206ENST00000523469 PAMP19021 973 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 KCNJ6P48051 423 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 GFRA1P56159 465 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 CYP4F3Q08477 520 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 SNX17Q15036 470 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 XP32Q5T750 250 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 SLCO6A1Q86UG4 719 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 ABHD4Q8TB40 342 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 KIRREL1Q96J84 757 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 GPRC5CQ9NQ84 441 aa8.91□□□□□ -0.98
CPNE3-206ENST00000523469 WTIPA6NIX2 430 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-206ENST00000523469 NOTOA8MTQ0 251 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 ADCY3O60266 1144 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 PAPLNO95428 1278 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 TRHRP34981 398 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-206ENST00000523469 ECI1P42126 302 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 LONRF2Q1L5Z9 754 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 GALNT18Q6P9A2 607 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 JAMLQ86YT9 394 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 ZBTB38Q8NAP3 1195 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-206ENST00000523469 NPLOC4Q8TAT6 608 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 KCTD13Q8WZ19 329 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 IER2Q9BTL4 223 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 PIF1Q9H611 641 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 C19orf44Q9H6X5 657 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 TAF6LQ9Y6J9 622 aa8.9□□□□□ -0.98
CPNE3-206ENST00000523469 NPHP3-ACAD11A0A0J9YXS1 232 aa8.89□□□□□ -0.99
CPNE3-206ENST00000523469 PLS3P13797 630 aa8.89□□□□□ -0.99
CPNE3-206ENST00000523469 MAP4K2Q12851 820 aa8.89□□□□□ -0.99
CPNE3-206ENST00000523469 SF1Q15637 639 aaKnown RBP8.89□□□□□ -0.99
CPNE3-206ENST00000523469 HSF5Q4G112 596 aaPredicted RBP8.89□□□□□ -0.99
CPNE3-206ENST00000523469 FYB2Q5VWT5 728 aa8.89□□□□□ -0.99
CPNE3-206ENST00000523469 FRS2Q8WU20 508 aa8.89□□□□□ -0.99
CPNE3-206ENST00000523469 JMJD8Q96S16 334 aa8.89□□□□□ -0.99
CPNE3-206ENST00000523469 CLEC1BQ9P126 229 aa8.89□□□□□ -0.99
CPNE3-206ENST00000523469 GPR160Q9UJ42 338 aa8.89□□□□□ -0.99
CPNE3-206ENST00000523469 PRODHO43272 600 aa8.88□□□□□ -0.99
CPNE3-206ENST00000523469 PABPC1P11940 636 aaKnown RBP8.88□□□□□ -0.99
CPNE3-206ENST00000523469 TAL1P17542 331 aaPredicted RBP8.88□□□□□ -0.99
CPNE3-206ENST00000523469 TIGD5Q53EQ6 642 aa8.88□□□□□ -0.99
CPNE3-206ENST00000523469 ZC3H12BQ5HYM0 836 aaKnown RBP8.88□□□□□ -0.99
CPNE3-206ENST00000523469 E4F1Q66K89 784 aaPredicted RBP8.88□□□□□ -0.99
CPNE3-206ENST00000523469 IQCEQ6IPM2 695 aa8.88□□□□□ -0.99
CPNE3-206ENST00000523469 ZSWIM9Q86XI8 627 aa8.88□□□□□ -0.99
CPNE3-206ENST00000523469 TMEM145Q8NBT3 493 aa8.88□□□□□ -0.99
CPNE3-206ENST00000523469 THAP3Q8WTV1 239 aaPredicted RBP8.88□□□□□ -0.99
CPNE3-206ENST00000523469 C1orf159Q96HA4 380 aa8.88□□□□□ -0.99
CPNE3-206ENST00000523469 MMP19Q99542 508 aa8.88□□□□□ -0.99
CPNE3-206ENST00000523469 PSPNO60542 156 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 FAM153BP0C7A2 387 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 L1CAMP32004 1257 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 RBM10P98175 930 aaKnown RBP8.87□□□□□ -0.99
CPNE3-206ENST00000523469 LAPTM5Q13571 262 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 KCNMB1Q16558 191 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 PRSS53Q2L4Q9 553 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 TMEM67Q5HYA8 995 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 SLC35F1Q5T1Q4 408 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 ACBD5Q5T8D3 534 aaPredicted RBP8.87□□□□□ -0.99
CPNE3-206ENST00000523469 NSMFQ6X4W1 530 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 NLRX1Q86UT6 975 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 JMYQ8N9B5 988 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 KREMEN2Q8NCW0 462 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 OSBP2Q969R2 916 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 CDC6Q99741 560 aa8.87□□□□□ -0.99
CPNE3-206ENST00000523469 DLX3O60479 287 aa8.86□□□□□ -0.99
CPNE3-206ENST00000523469 IGSF3O75054 1194 aa8.86□□□□□ -0.99
CPNE3-206ENST00000523469 GLI1P08151 1106 aa8.86□□□□□ -0.99
CPNE3-206ENST00000523469 TESK1Q15569 626 aa8.86□□□□□ -0.99
CPNE3-206ENST00000523469 YOD1Q5VVQ6 348 aaPredicted RBP8.86□□□□□ -0.99
CPNE3-206ENST00000523469 CPNE8Q86YQ8 564 aa8.86□□□□□ -0.99
CPNE3-206ENST00000523469 LILRB2Q8N423 598 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms