RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 NMIQ13287 307 aaPredicted RBP14.92□□□□□ -0.02
TOP1MT-217ENST00000523417 GNASQ5JWF2 1037 aa14.92□□□□□ -0.02
TOP1MT-217ENST00000523417 AKNAD1Q5T1N1 836 aa14.92□□□□□ -0.02
TOP1MT-217ENST00000523417 SLC43A3Q8NBI5 491 aa14.92□□□□□ -0.02
TOP1MT-217ENST00000523417 HOMER2Q9NSB8 354 aa14.92□□□□□ -0.02
TOP1MT-217ENST00000523417 TBX21Q9UL17 535 aa14.92□□□□□ -0.02
TOP1MT-217ENST00000523417 MYADML2A6NDP7 307 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 ARVCFO00192 962 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 PQBP1O60828 265 aaKnown RBP14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 C6orf222P0C671 652 aaPredicted RBP14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 ALAS1P13196 640 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 RAG1P15918 1043 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 SDSP20132 328 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 MUM1L1Q5H9M0 696 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 TAPT1Q6NXT6 567 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 MFSD6Q6ZSS7 791 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 ZNF589Q86UQ0 364 aaPredicted RBP14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 CHD1LQ86WJ1 897 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 DGKHQ86XP1 1220 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 GUCD1Q96NT3 240 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 LNPKQ9C0E8 428 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 SEMA6BQ9H3T3 888 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 PLXNA1Q9UIW2 1896 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 ASTN1O14525 1302 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 CCDC171Q6TFL3 1326 aa14.91□□□□□ -0.02
TOP1MT-217ENST00000523417 MYH4Q9Y623 1939 aa14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 TMEM265A0A087WTH1 108 aa14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 A0A0U1RQG5 324 aaPredicted RBP14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 IGHDP01880 384 aa14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 EPHB4P54760 987 aa14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 SYDE2Q5VT97 1194 aa14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 TTBK2Q6IQ55 1244 aa14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 MFSD5Q6N075 450 aa14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 RGS22Q8NE09 1264 aa14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 ANKS1AQ92625 1134 aa14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 RNF41Q9H4P4 317 aaPredicted RBP14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 VTA1Q9NP79 307 aa14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 CCPG1Q9ULG6 757 aa14.9□□□□□ -0.02
TOP1MT-217ENST00000523417 RBM47A0AV96 593 aaKnown RBP14.89□□□□□ -0.03
TOP1MT-217ENST00000523417 TRIM6-TRIM34B2RNG4 842 aa14.89□□□□□ -0.03
TOP1MT-217ENST00000523417 CD4P01730 458 aa14.89□□□□□ -0.03
TOP1MT-217ENST00000523417 PDHBP11177 359 aa14.89□□□□□ -0.03
TOP1MT-217ENST00000523417 SMPD1P17405 629 aa14.89□□□□□ -0.03
TOP1MT-217ENST00000523417 IRX5P78411 483 aaPredicted RBP14.89□□□□□ -0.03
TOP1MT-217ENST00000523417 FPGSQ05932 587 aa14.89□□□□□ -0.03
TOP1MT-217ENST00000523417 ZNF543Q08ER8 600 aa14.89□□□□□ -0.03
TOP1MT-217ENST00000523417 CCDC178Q5BJE1 867 aa14.89□□□□□ -0.03
TOP1MT-217ENST00000523417 CCDC174Q6PII3 467 aa14.89□□□□□ -0.03
TOP1MT-217ENST00000523417 ADD3Q9UEY8 706 aaKnown RBP14.89□□□□□ -0.03
TOP1MT-217ENST00000523417 LTBP2Q14767 1821 aa14.88□□□□□ -0.03
TOP1MT-217ENST00000523417 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.88□□□□□ -0.03
TOP1MT-217ENST00000523417 HIP1O00291 1037 aa14.88□□□□□ -0.03
TOP1MT-217ENST00000523417 SLC16A2P36021 539 aa14.88□□□□□ -0.03
TOP1MT-217ENST00000523417 SNAP25P60880 206 aa14.88□□□□□ -0.03
TOP1MT-217ENST00000523417 ZNF697Q5TEC3 545 aa14.88□□□□□ -0.03
TOP1MT-217ENST00000523417 FAM126BQ8IXS8 530 aa14.88□□□□□ -0.03
TOP1MT-217ENST00000523417 ESR2Q92731 530 aa14.88□□□□□ -0.03
TOP1MT-217ENST00000523417 RILPL2Q969X0 211 aa14.88□□□□□ -0.03
TOP1MT-217ENST00000523417 TOMM22Q9NS69 142 aa14.88□□□□□ -0.03
TOP1MT-217ENST00000523417 ISY1Q9ULR0 285 aaKnown RBP14.88□□□□□ -0.03
TOP1MT-217ENST00000523417 WDR19Q8NEZ3 1342 aa14.88□□□□□ -0.03
TOP1MT-217ENST00000523417 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 ZNF213O14771 459 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 ZEB2O60315 1214 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 BAATQ14032 418 aaPredicted RBP14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 FSCN1Q16658 493 aaKnown RBP14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 CCDC96Q2M329 555 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 DUSP28Q4G0W2 176 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 RRP12Q5JTH9 1297 aaKnown RBP14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 GPATCH4Q5T3I0 446 aaKnown RBP14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 RASIP1Q5U651 963 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 NSMFQ6X4W1 530 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 C16orf59Q7L2K0 433 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 RASGRP2Q7LDG7 609 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 CLEC4DQ8WXI8 215 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 VTI1AQ96AJ9 217 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 DSCC1Q9BVC3 393 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 AP5M1Q9H0R1 490 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 PDGFCQ9NRA1 345 aa14.87□□□□□ -0.03
TOP1MT-217ENST00000523417 DLL1O00548 723 aa14.86□□□□□ -0.03
TOP1MT-217ENST00000523417 TLR3O15455 904 aaKnown RBP14.86□□□□□ -0.03
TOP1MT-217ENST00000523417 DYNC1LI2O43237 492 aaPredicted RBP14.86□□□□□ -0.03
TOP1MT-217ENST00000523417 HAND2P61296 217 aa14.86□□□□□ -0.03
TOP1MT-217ENST00000523417 PPIGQ13427 754 aaKnown RBP eCLIP14.86□□□□□ -0.032e-6■□□□□ 9.4
TOP1MT-217ENST00000523417 B4GALNT3Q6L9W6 998 aa14.86□□□□□ -0.03
TOP1MT-217ENST00000523417 TLK2Q86UE8 772 aa14.86□□□□□ -0.03
TOP1MT-217ENST00000523417 TBC1D10CQ8IV04 446 aa14.86□□□□□ -0.03
TOP1MT-217ENST00000523417 DNERQ8NFT8 737 aa14.86□□□□□ -0.03
TOP1MT-217ENST00000523417 CHMP4CQ96CF2 233 aa14.86□□□□□ -0.03
TOP1MT-217ENST00000523417 RNPC3Q96LT9 517 aaKnown RBP14.86□□□□□ -0.03
TOP1MT-217ENST00000523417 CDX2Q99626 313 aaPredicted RBP14.86□□□□□ -0.03
TOP1MT-217ENST00000523417 GPCPD1Q9NPB8 672 aa14.86□□□□□ -0.03
TOP1MT-217ENST00000523417 NFIBO00712 420 aa14.85□□□□□ -0.03
TOP1MT-217ENST00000523417 EDNRBP24530 442 aa14.85□□□□□ -0.03
TOP1MT-217ENST00000523417 ALDH5A1P51649 535 aaPredicted RBP14.85□□□□□ -0.03
TOP1MT-217ENST00000523417 BEX3Q00994 111 aa14.85□□□□□ -0.03
TOP1MT-217ENST00000523417 ITGA7Q13683 1181 aa14.85□□□□□ -0.03
TOP1MT-217ENST00000523417 TMEM240Q5SV17 173 aa14.85□□□□□ -0.03
TOP1MT-217ENST00000523417 KIAA1211Q6ZU35 1233 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms