RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 CHURC1Q8WUH1 139 aa27.04■■□□□ 1.92
PVT1-218ENST00000523328 STAG1Q8WVM7 1258 aa27.04■■□□□ 1.92
PVT1-218ENST00000523328 GPATCH3Q96I76 525 aa27.04■■□□□ 1.92
PVT1-218ENST00000523328 GMCL1Q96IK5 515 aa27.04■■□□□ 1.92
PVT1-218ENST00000523328 HIPK3Q9H422 1215 aa27.04■■□□□ 1.92
PVT1-218ENST00000523328 DDX49Q9Y6V7 483 aaKnown RBP27.04■■□□□ 1.92
PVT1-218ENST00000523328 NCOR1O75376 2440 aa27.04■■□□□ 1.92
PVT1-218ENST00000523328 SMPD1P17405 629 aa27.03■■□□□ 1.92
PVT1-218ENST00000523328 TFAP4Q01664 338 aa27.03■■□□□ 1.92
PVT1-218ENST00000523328 PDE4BQ07343 736 aa27.03■■□□□ 1.92
PVT1-218ENST00000523328 ITGA7Q13683 1181 aa27.03■■□□□ 1.92
PVT1-218ENST00000523328 RAB30Q15771 203 aa27.03■■□□□ 1.92
PVT1-218ENST00000523328 FSCN1Q16658 493 aaKnown RBP27.03■■□□□ 1.92
PVT1-218ENST00000523328 TKFCQ3LXA3 575 aa27.03■■□□□ 1.92
PVT1-218ENST00000523328 ATXN2LQ8WWM7 1075 aaKnown RBP27.03■■□□□ 1.92
PVT1-218ENST00000523328 TRERF1Q96PN7 1200 aa27.03■■□□□ 1.92
PVT1-218ENST00000523328 SEC62Q99442 399 aaKnown RBP27.03■■□□□ 1.92
PVT1-218ENST00000523328 DCTPP1Q9H773 170 aa27.03■■□□□ 1.92
PVT1-218ENST00000523328 MSRAQ9UJ68 235 aa27.03■■□□□ 1.92
PVT1-218ENST00000523328 PLA2G6O60733 806 aa27.02■■□□□ 1.92
PVT1-218ENST00000523328 FGBP02675 491 aa27.02■■□□□ 1.92
PVT1-218ENST00000523328 SLC1A4P43007 532 aa27.02■■□□□ 1.92
PVT1-218ENST00000523328 PDGFCQ9NRA1 345 aa27.02■■□□□ 1.92
PVT1-218ENST00000523328 THEGQ9P2T0 379 aa27.02■■□□□ 1.92
PVT1-218ENST00000523328 RCAN3Q9UKA8 241 aa27.02■■□□□ 1.92
PVT1-218ENST00000523328 ISY1Q9ULR0 285 aaKnown RBP27.02■■□□□ 1.92
PVT1-218ENST00000523328 YBX2Q9Y2T7 364 aaKnown RBP27.02■■□□□ 1.92
PVT1-218ENST00000523328 ALAS1P13196 640 aa27.01■■□□□ 1.91
PVT1-218ENST00000523328 MCCP23508 829 aa27.01■■□□□ 1.91
PVT1-218ENST00000523328 PPARAQ07869 468 aa27.01■■□□□ 1.91
PVT1-218ENST00000523328 TAPT1Q6NXT6 567 aa27.01■■□□□ 1.91
PVT1-218ENST00000523328 CHMP4CQ96CF2 233 aa27.01■■□□□ 1.91
PVT1-218ENST00000523328 NOC4LQ9BVI4 516 aaKnown RBP27.01■■□□□ 1.91
PVT1-218ENST00000523328 NACAP1Q9BZK3 213 aa27.01■■□□□ 1.91
PVT1-218ENST00000523328 MTIF3Q9H2K0 278 aaKnown RBP27.01■■□□□ 1.91
PVT1-218ENST00000523328 NKX2-4Q9H2Z4 354 aa27.01■■□□□ 1.91
PVT1-218ENST00000523328 DYNC1LI2O43237 492 aaPredicted RBP27■■□□□ 1.91
PVT1-218ENST00000523328 B4GALT4O60513 344 aa27■■□□□ 1.91
PVT1-218ENST00000523328 IKQ13123 557 aaPredicted RBP27■■□□□ 1.91
PVT1-218ENST00000523328 MUM1L1Q5H9M0 696 aa27■■□□□ 1.91
PVT1-218ENST00000523328 TMEM63BQ5T3F8 832 aa27■■□□□ 1.91
PVT1-218ENST00000523328 ASB2Q96Q27 587 aa27■■□□□ 1.91
PVT1-218ENST00000523328 SEZ6LQ9BYH1 1024 aa27■■□□□ 1.91
PVT1-218ENST00000523328 AP5M1Q9H0R1 490 aa27■■□□□ 1.91
PVT1-218ENST00000523328 TRPV6Q9H1D0 765 aa27■■□□□ 1.91
PVT1-218ENST00000523328 WNT8AQ9H1J5 351 aa27■■□□□ 1.91
PVT1-218ENST00000523328 CCL23P55773 120 aa26.99■■□□□ 1.91
PVT1-218ENST00000523328 IQSEC1Q6DN90 963 aa26.99■■□□□ 1.91
PVT1-218ENST00000523328 OTOP2Q7RTS6 562 aa26.99■■□□□ 1.91
PVT1-218ENST00000523328 FBXO16Q8IX29 292 aaPredicted RBP26.99■■□□□ 1.91
PVT1-218ENST00000523328 VWCEQ96DN2 955 aa26.99■■□□□ 1.91
PVT1-218ENST00000523328 NAPBQ9H115 298 aa26.99■■□□□ 1.91
PVT1-218ENST00000523328 CYP39A1Q9NYL5 469 aa26.99■■□□□ 1.91
PVT1-218ENST00000523328 Q9Y3F1 56 aa26.99■■□□□ 1.91
PVT1-218ENST00000523328 ZEB2O60315 1214 aa26.98■■□□□ 1.91
PVT1-218ENST00000523328 SLC3A2P08195 630 aaKnown RBP26.98■■□□□ 1.91
PVT1-218ENST00000523328 SNAP25P60880 206 aa26.98■■□□□ 1.91
PVT1-218ENST00000523328 CCDC85BQ15834 202 aaPredicted RBP26.98■■□□□ 1.91
PVT1-218ENST00000523328 LRRFIP1Q32MZ4 808 aaKnown RBP26.98■■□□□ 1.91
PVT1-218ENST00000523328 KCTD1Q719H9 257 aa26.98■■□□□ 1.91
PVT1-218ENST00000523328 EEPD1Q7L9B9 569 aa26.98■■□□□ 1.91
PVT1-218ENST00000523328 RASGRP2Q7LDG7 609 aa26.98■■□□□ 1.91
PVT1-218ENST00000523328 SLC28A3Q9HAS3 691 aa26.98■■□□□ 1.91
PVT1-218ENST00000523328 PRR12Q9ULL5 1215 aa26.98■■□□□ 1.91
PVT1-218ENST00000523328 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.98■■□□□ 1.91
PVT1-218ENST00000523328 IGFBP4P22692 258 aa26.97■■□□□ 1.91
PVT1-218ENST00000523328 PSMC6P62333 389 aa26.97■■□□□ 1.91
PVT1-218ENST00000523328 RCSD1Q6JBY9 416 aa26.97■■□□□ 1.91
PVT1-218ENST00000523328 IL17RBQ9NRM6 502 aa26.97■■□□□ 1.91
PVT1-218ENST00000523328 REV3LO60673 3130 aa26.96■■□□□ 1.91
PVT1-218ENST00000523328 ZMYM1Q5SVZ6 1142 aa26.96■■□□□ 1.91
PVT1-218ENST00000523328 MORC4Q8TE76 937 aa26.96■■□□□ 1.91
PVT1-218ENST00000523328 PURBQ96QR8 312 aaKnown RBP26.96■■□□□ 1.91
PVT1-218ENST00000523328 STX8Q9UNK0 236 aa26.96■■□□□ 1.91
PVT1-218ENST00000523328 TTC41PQ6P2S7 1318 aa26.95■■□□□ 1.91
PVT1-218ENST00000523328 FOXP2O15409 715 aa26.95■■□□□ 1.9
PVT1-218ENST00000523328 NMT2O60551 498 aa26.95■■□□□ 1.9
PVT1-218ENST00000523328 COL9A1P20849 921 aa26.95■■□□□ 1.9
PVT1-218ENST00000523328 RABGGTBP53611 331 aa26.95■■□□□ 1.9
PVT1-218ENST00000523328 MRPS5P82675 430 aaKnown RBP26.95■■□□□ 1.9
PVT1-218ENST00000523328 PPP4R3BQ5MIZ7 849 aa26.95■■□□□ 1.9
PVT1-218ENST00000523328 PI4K2BQ8TCG2 481 aa26.95■■□□□ 1.9
PVT1-218ENST00000523328 ADAMTS19Q8TE59 1207 aa26.95■■□□□ 1.9
PVT1-218ENST00000523328 VTA1Q9NP79 307 aa26.95■■□□□ 1.9
PVT1-218ENST00000523328 NSMFQ6X4W1 530 aa26.94■■□□□ 1.9
PVT1-218ENST00000523328 ALDH8A1Q9H2A2 487 aaPredicted RBP26.94■■□□□ 1.9
PVT1-218ENST00000523328 INCENPQ9NQS7 918 aa26.94■■□□□ 1.9
PVT1-218ENST00000523328 SCN5AQ14524 2016 aa26.94■■□□□ 1.9
PVT1-218ENST00000523328 TSPY2A6NKD2 308 aa26.93■■□□□ 1.9
PVT1-218ENST00000523328 KIAA1211Q6ZU35 1233 aa26.93■■□□□ 1.9
PVT1-218ENST00000523328 RPUSD2Q8IZ73 545 aaKnown RBP26.93■■□□□ 1.9
PVT1-218ENST00000523328 SCLYQ96I15 445 aa26.93■■□□□ 1.9
PVT1-218ENST00000523328 FSD1Q9BTV5 496 aa26.93■■□□□ 1.9
PVT1-218ENST00000523328 CCPG1Q9ULG6 757 aa26.93■■□□□ 1.9
PVT1-218ENST00000523328 SLC4A7Q9Y6M7 1214 aa26.93■■□□□ 1.9
PVT1-218ENST00000523328 ICAM1P05362 532 aa26.92■■□□□ 1.9
PVT1-218ENST00000523328 MYOGP15173 224 aa26.92■■□□□ 1.9
PVT1-218ENST00000523328 NOVP48745 357 aa26.92■■□□□ 1.9
PVT1-218ENST00000523328 CTDSPL2Q05D32 466 aa26.92■■□□□ 1.9
PVT1-218ENST00000523328 DUSP28Q4G0W2 176 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms