RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 FOSL2P15408 326 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 NT5C2P49902 561 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 CNTN2Q02246 1040 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 TNFAIP2Q03169 654 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 TSHZ3Q63HK5 1081 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 IQSEC1Q6DN90 963 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 TMEM199Q8N511 208 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 MYLIPQ8WY64 445 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 SYMPKQ92797 1274 aaKnown RBP11.14□□□□□ -0.63
SDC2-207ENST00000522911 SEC62Q99442 399 aaKnown RBP11.14□□□□□ -0.63
SDC2-207ENST00000522911 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.14□□□□□ -0.632e-15■□□□□ 8.7
SDC2-207ENST00000522911 BCL11AQ9H165 835 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 IL17RBQ9NRM6 502 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 RNF146Q9NTX7 359 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 TCP11L1Q9NUJ3 509 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 CYP39A1Q9NYL5 469 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 PNMA2Q9UL42 364 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 SOWAHBA6NEL2 793 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 ICAM1P05362 532 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 MX1P20591 662 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 AKNAD1Q5T1N1 836 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 TAPT1Q6NXT6 567 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 DCAF4Q8WV16 495 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 HERVK_113Q902F9 699 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 TIFAQ96CG3 184 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 AGBL1Q96MI9 1066 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 TRERF1Q96PN7 1200 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 FSD1Q9BTV5 496 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 RANBP17Q9H2T7 1088 aaKnown RBP11.13□□□□□ -0.63
SDC2-207ENST00000522911 ZNF576Q9H609 170 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 VTA1Q9NP79 307 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 IL23AQ9NPF7 189 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 PCDHB15Q9Y5E8 787 aa11.13□□□□□ -0.63
SDC2-207ENST00000522911 TRANK1O15050 2925 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 RBM47A0AV96 593 aaKnown RBP11.12□□□□□ -0.63
SDC2-207ENST00000522911 TSPY2A6NKD2 308 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 ZEB2O60315 1214 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 PCP11498 1178 aaKnown RBP11.12□□□□□ -0.63
SDC2-207ENST00000522911 CSF2RAP15509 400 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 MCCP23508 829 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 IRX5P78411 483 aaPredicted RBP11.12□□□□□ -0.63
SDC2-207ENST00000522911 GRIN2CQ14957 1233 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 FSCN1Q16658 493 aaKnown RBP11.12□□□□□ -0.63
SDC2-207ENST00000522911 TLK2Q86UE8 772 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 STK11IPQ8N1F8 1099 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 EVI5LQ96CN4 794 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 MTIF3Q9H2K0 278 aaKnown RBP11.12□□□□□ -0.63
SDC2-207ENST00000522911 HELLSQ9NRZ9 838 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 ADD3Q9UEY8 706 aaKnown RBP11.12□□□□□ -0.63
SDC2-207ENST00000522911 PRR12Q9ULL5 1215 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 STX8Q9UNK0 236 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 LRRC37A2A6NM11 1700 aa11.12□□□□□ -0.63
SDC2-207ENST00000522911 GRIN2DO15399 1336 aa11.11□□□□□ -0.63
SDC2-207ENST00000522911 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.11□□□□□ -0.63
SDC2-207ENST00000522911 ITGA7Q13683 1181 aa11.11□□□□□ -0.63
SDC2-207ENST00000522911 RAB30Q15771 203 aa11.11□□□□□ -0.63
SDC2-207ENST00000522911 DUSP28Q4G0W2 176 aa11.11□□□□□ -0.63
SDC2-207ENST00000522911 PBX4Q9BYU1 374 aa11.11□□□□□ -0.63
SDC2-207ENST00000522911 AP5M1Q9H0R1 490 aa11.11□□□□□ -0.63
SDC2-207ENST00000522911 HOMER2Q9NSB8 354 aa11.11□□□□□ -0.63
SDC2-207ENST00000522911 MCM3APO60318 1980 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 PFKMP08237 780 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 SNHG28P0DPA3 235 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 TOP1P11387 765 aaKnown RBP11.1□□□□□ -0.63
SDC2-207ENST00000522911 ALAS1P13196 640 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 SMPD1P17405 629 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 EDNRBP24530 442 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 IKQ13123 557 aaPredicted RBP11.1□□□□□ -0.63
SDC2-207ENST00000522911 AAMPQ13685 434 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 MUM1L1Q5H9M0 696 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 CXCL17Q6UXB2 119 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 ZNF365Q70YC5 407 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 KCTD1Q719H9 257 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 OTUD7AQ8TE49 926 aaPredicted RBP11.1□□□□□ -0.63
SDC2-207ENST00000522911 VTI1AQ96AJ9 217 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 TTC14Q96N46 770 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 NOC4LQ9BVI4 516 aaKnown RBP11.1□□□□□ -0.63
SDC2-207ENST00000522911 HIPK3Q9H422 1215 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 CCPG1Q9ULG6 757 aa11.1□□□□□ -0.63
SDC2-207ENST00000522911 WDR19Q8NEZ3 1342 aa11.09□□□□□ -0.63
SDC2-207ENST00000522911 NKRFO15226 690 aaKnown RBP eCLIP11.09□□□□□ -0.631e-7■□□□□ 10.9
SDC2-207ENST00000522911 FGAP02671 866 aa11.09□□□□□ -0.63
SDC2-207ENST00000522911 SUPT20HL2P0C7V6 817 aa11.09□□□□□ -0.63
SDC2-207ENST00000522911 SLC4A3P48751 1232 aa11.09□□□□□ -0.63
SDC2-207ENST00000522911 PDE1AP54750 535 aa11.09□□□□□ -0.63
SDC2-207ENST00000522911 BEX3Q00994 111 aa11.09□□□□□ -0.63
SDC2-207ENST00000522911 HDAC1Q13547 482 aaPredicted RBP11.09□□□□□ -0.63
SDC2-207ENST00000522911 TJAP1Q5JTD0 557 aa11.09□□□□□ -0.63
SDC2-207ENST00000522911 RGS22Q8NE09 1264 aa11.09□□□□□ -0.63
SDC2-207ENST00000522911 DNERQ8NFT8 737 aa11.09□□□□□ -0.63
SDC2-207ENST00000522911 ATXN2LQ8WWM7 1075 aaKnown RBP11.09□□□□□ -0.63
SDC2-207ENST00000522911 VWCEQ96DN2 955 aa11.09□□□□□ -0.63
SDC2-207ENST00000522911 GAS2L1Q99501 681 aaPredicted RBP11.09□□□□□ -0.63
SDC2-207ENST00000522911 POLR3EQ9NVU0 708 aa11.09□□□□□ -0.63
SDC2-207ENST00000522911 REV3LO60673 3130 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 DYNC1LI2O43237 492 aaPredicted RBP11.08□□□□□ -0.64
SDC2-207ENST00000522911 B4GALT4O60513 344 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 RANBP6O60518 1105 aaKnown RBP11.08□□□□□ -0.64
SDC2-207ENST00000522911 NMT2O60551 498 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 KPNA6O60684 536 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms