RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SPACA7Q96KW9 195 aa8.69□□□□□ -1.02
SDCBP-210ENST00000522843 DBNDD2Q9BQY9 259 aa8.69□□□□□ -1.02
SDCBP-210ENST00000522843 ISCA1Q9BUE6 129 aa8.69□□□□□ -1.02
SDCBP-210ENST00000522843 TM4SF5O14894 197 aa8.68□□□□□ -1.02
SDCBP-210ENST00000522843 WNT11O96014 354 aa8.68□□□□□ -1.02
SDCBP-210ENST00000522843 CDC27P30260 824 aa8.68□□□□□ -1.02
SDCBP-210ENST00000522843 NF2P35240 595 aa8.68□□□□□ -1.02
SDCBP-210ENST00000522843 SLC9C1Q4G0N8 1177 aa8.68□□□□□ -1.02
SDCBP-210ENST00000522843 CEP135Q66GS9 1140 aa8.68□□□□□ -1.02
SDCBP-210ENST00000522843 TXNDC11Q6PKC3 985 aa8.68□□□□□ -1.02
SDCBP-210ENST00000522843 KIAA1211Q6ZU35 1233 aa8.68□□□□□ -1.02
SDCBP-210ENST00000522843 OR13H1Q8NG92 308 aa8.68□□□□□ -1.02
SDCBP-210ENST00000522843 MYRFLQ96LU7 910 aa8.68□□□□□ -1.02
SDCBP-210ENST00000522843 ARHGAP39Q9C0H5 1083 aa8.68□□□□□ -1.02
SDCBP-210ENST00000522843 LACRTQ9GZZ8 138 aa8.68□□□□□ -1.02
SDCBP-210ENST00000522843 SMNDC1O75940 238 aaKnown RBP eCLIP8.67□□□□□ -1.02
SDCBP-210ENST00000522843 AOX1Q06278 1338 aa8.67□□□□□ -1.02
SDCBP-210ENST00000522843 HYAL2Q12891 473 aa8.67□□□□□ -1.02
SDCBP-210ENST00000522843 TRIP4Q15650 581 aaPredicted RBP8.67□□□□□ -1.02
SDCBP-210ENST00000522843 DUOXA2Q1HG44 320 aa8.67□□□□□ -1.02
SDCBP-210ENST00000522843 CLEC10AQ8IUN9 316 aa8.67□□□□□ -1.02
SDCBP-210ENST00000522843 ETFBKMTQ8IXQ9 262 aa8.67□□□□□ -1.02
SDCBP-210ENST00000522843 KLHL23Q8NBE8 558 aa8.67□□□□□ -1.02
SDCBP-210ENST00000522843 DPF3Q92784 378 aa8.67□□□□□ -1.02
SDCBP-210ENST00000522843 PLEKHF1Q96S99 279 aa8.67□□□□□ -1.02
SDCBP-210ENST00000522843 IRS4O14654 1257 aaPredicted RBP8.66□□□□□ -1.02
SDCBP-210ENST00000522843 ATG7O95352 703 aa8.66□□□□□ -1.02
SDCBP-210ENST00000522843 BRD2P25440 801 aaKnown RBP8.66□□□□□ -1.02
SDCBP-210ENST00000522843 ATP11AP98196 1134 aa8.66□□□□□ -1.02
SDCBP-210ENST00000522843 FZD5Q13467 585 aa8.66□□□□□ -1.02
SDCBP-210ENST00000522843 OCLNQ16625 522 aa8.66□□□□□ -1.02
SDCBP-210ENST00000522843 SWI5Q1ZZU3 235 aa8.66□□□□□ -1.02
SDCBP-210ENST00000522843 KRT24Q2M2I5 525 aa8.66□□□□□ -1.02
SDCBP-210ENST00000522843 CFAP53Q96M91 514 aa8.66□□□□□ -1.02
SDCBP-210ENST00000522843 FAM83CQ9BQN1 747 aa8.66□□□□□ -1.02
SDCBP-210ENST00000522843 DEFB129Q9H1M3 183 aa8.66□□□□□ -1.02
SDCBP-210ENST00000522843 NUDCQ9Y266 331 aa8.66□□□□□ -1.02
SDCBP-210ENST00000522843 PCDHAC2Q9Y5I4 1007 aa8.66□□□□□ -1.02
SDCBP-210ENST00000522843 OTOFQ9HC10 1997 aa8.66□□□□□ -1.02
SDCBP-210ENST00000522843 FSCN2O14926 492 aa8.65□□□□□ -1.02
SDCBP-210ENST00000522843 USP2O75604 605 aaPredicted RBP8.65□□□□□ -1.02
SDCBP-210ENST00000522843 CTGFP29279 349 aa8.65□□□□□ -1.02
SDCBP-210ENST00000522843 PPP2R1AP30153 589 aa8.65□□□□□ -1.02
SDCBP-210ENST00000522843 CDC25BP30305 580 aa8.65□□□□□ -1.02
SDCBP-210ENST00000522843 TMEM164Q5U3C3 297 aa8.65□□□□□ -1.02
SDCBP-210ENST00000522843 FAM117BQ6P1L5 589 aa8.65□□□□□ -1.02
SDCBP-210ENST00000522843 APOBEC3FQ8IUX4 373 aaKnown RBP8.65□□□□□ -1.02
SDCBP-210ENST00000522843 FAM20CQ8IXL6 584 aa8.65□□□□□ -1.02
SDCBP-210ENST00000522843 BRI3BPQ8WY22 251 aa8.65□□□□□ -1.02
SDCBP-210ENST00000522843 CCDC97Q96F63 343 aaPredicted RBP8.65□□□□□ -1.02
SDCBP-210ENST00000522843 ARID1BQ8NFD5 2236 aaPredicted RBP8.65□□□□□ -1.03
SDCBP-210ENST00000522843 COL1A1P02452 1464 aaPredicted RBP8.64□□□□□ -1.03
SDCBP-210ENST00000522843 MED23Q9ULK4 1368 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 XDHP47989 1333 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 A0A1W2PPC1 479 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 NFE2L2Q16236 605 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 NBPF12Q5TAG4 269 aaPredicted RBP8.64□□□□□ -1.03
SDCBP-210ENST00000522843 STRIP1Q5VSL9 837 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 CAPN12Q6ZSI9 719 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 Q7L0L9 218 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 FAM43AQ8N2R8 423 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 PLBD2Q8NHP8 589 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 PIK3R5Q8WYR1 880 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 SAP130Q9H0E3 1048 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 FAM13BQ9NYF5 915 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 CHPF2Q9P2E5 772 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 TSPYL4Q9UJ04 414 aa8.64□□□□□ -1.03
SDCBP-210ENST00000522843 UNCXA6NJT0 531 aa8.63□□□□□ -1.03
SDCBP-210ENST00000522843 ATP2B4P23634 1241 aa8.63□□□□□ -1.03
SDCBP-210ENST00000522843 KLRK1P26718 216 aa8.63□□□□□ -1.03
SDCBP-210ENST00000522843 SCNN1AP37088 669 aa8.63□□□□□ -1.03
SDCBP-210ENST00000522843 TTC39BQ5VTQ0 682 aaPredicted RBP8.63□□□□□ -1.03
SDCBP-210ENST00000522843 OTUD7BQ6GQQ9 843 aa8.63□□□□□ -1.03
SDCBP-210ENST00000522843 KIAA0825Q8IV33 1275 aa8.63□□□□□ -1.03
SDCBP-210ENST00000522843 SHKBP1Q8TBC3 707 aa8.63□□□□□ -1.03
SDCBP-210ENST00000522843 JARID2Q92833 1246 aaPredicted RBP8.63□□□□□ -1.03
SDCBP-210ENST00000522843 RASSF4Q9H2L5 321 aa8.63□□□□□ -1.03
SDCBP-210ENST00000522843 STAP2Q9UGK3 403 aa8.63□□□□□ -1.03
SDCBP-210ENST00000522843 EYSQ5T1H1 3165 aa8.63□□□□□ -1.03
SDCBP-210ENST00000522843 MUC3AQ02505 3323 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 ALPK3Q96L96 1907 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 MYO3BQ8WXR4 1341 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 SART1O43290 800 aaKnown RBP8.62□□□□□ -1.03
SDCBP-210ENST00000522843 GJA8P48165 433 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 LACTBP83111 547 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-210ENST00000522843 TAF1CQ15572 869 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-210ENST00000522843 LCE1DQ5T752 114 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 ADAMTSL4Q6UY14 1074 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 BEND4Q6ZU67 534 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 CERS5Q8N5B7 392 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 ZBTB38Q8NAP3 1195 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-210ENST00000522843 FOXD4L4Q8WXT5 416 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-210ENST00000522843 PBXIP1Q96AQ6 731 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 OPTNQ96CV9 577 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 ELP3Q9H9T3 547 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 ADGRE2Q9UHX3 823 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 SERPINA10Q9UK55 444 aa8.62□□□□□ -1.03
SDCBP-210ENST00000522843 FNDC3AQ9Y2H6 1198 aaKnown RBP8.62□□□□□ -1.03
SDCBP-210ENST00000522843 ECM29Q5VYK3 1845 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 ZNF804BA4D1E1 1349 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms