RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 PPFIBP1Q86W92 1011 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 OSTM1Q86WC4 334 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 ARHGAP18Q8N392 663 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 WDR60Q8WVS4 1066 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 TMEM87BQ96K49 555 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 OSBPL7Q9BZF2 842 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 DACT1Q9NYF0 836 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 MKL2Q9ULH7 1088 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.12□□□□□ -0.95
HMGB4-204ENST00000522796 CARNS1A5YM72 827 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 BTBD11A6QL63 1104 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 TEX28O15482 410 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 MYCP01106 439 aaPredicted RBP9.12□□□□□ -0.95
HMGB4-204ENST00000522796 TOP1P11387 765 aaKnown RBP9.12□□□□□ -0.95
HMGB4-204ENST00000522796 VARSP26640 1264 aaKnown RBP9.12□□□□□ -0.95
HMGB4-204ENST00000522796 LSP1P33241 339 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 MTTPP55157 894 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 PAK2Q13177 524 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 TOMM20Q15388 145 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 TAF11Q15544 211 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 STX1AQ16623 288 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 CCDC153Q494R4 210 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 ANKRD20A2Q5SQ80 823 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 ANKRD20A1Q5TYW2 823 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 ANKRD20A3Q5VUR7 823 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 TBC1D9BQ66K14 1250 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 ANO7Q6IWH7 933 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 FLCNQ8NFG4 579 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 NCSTNQ92542 709 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 SGCDQ92629 289 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 VCXQ9H320 206 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 SPC25Q9HBM1 224 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 TCF7L2Q9NQB0 619 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 PPP2R2CQ9Y2T4 447 aa9.12□□□□□ -0.95
HMGB4-204ENST00000522796 COL17A1Q9UMD9 1497 aaPredicted RBP9.12□□□□□ -0.95
HMGB4-204ENST00000522796 ALDH2P05091 517 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 SKIP12755 728 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 NFKBIAP25963 317 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 GEMIN4P57678 1058 aaKnown RBP9.11□□□□□ -0.95
HMGB4-204ENST00000522796 BNIP1Q12981 228 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 BYSLQ13895 437 aaKnown RBP9.11□□□□□ -0.95
HMGB4-204ENST00000522796 SIM2Q14190 667 aaPredicted RBP9.11□□□□□ -0.95
HMGB4-204ENST00000522796 GRAMD2AQ8IUY3 354 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 ITPRIPQ8IWB1 547 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 LINS1Q8NG48 757 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 MYCBPAPQ8TBZ2 947 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 CLMNQ96JQ2 1002 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 MAELQ96JY0 434 aaKnown RBP9.11□□□□□ -0.95
HMGB4-204ENST00000522796 RPGRIP1Q96KN7 1286 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 C8orf48Q96LL4 319 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 CCT7Q99832 543 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 FAM192AQ9GZU8 254 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 KRT82Q9NSB4 513 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 RMND1Q9NWS8 449 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 CDC42BPAQ5VT25 1732 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 ARHGEF12Q9NZN5 1544 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 ARHGAP6O43182 974 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 ZNF254O75437 659 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 RHOXF2BP0C7M4 288 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 SP100P23497 879 aaPredicted RBP9.11□□□□□ -0.95
HMGB4-204ENST00000522796 GPSM2P81274 684 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 DNM1Q05193 864 aaKnown RBP9.11□□□□□ -0.95
HMGB4-204ENST00000522796 PDCLQ13371 301 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 GPR162Q16538 588 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 ZNF362Q5T0B9 420 aaPredicted RBP9.11□□□□□ -0.95
HMGB4-204ENST00000522796 C3orf67Q6ZVT6 689 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 LURAP1LQ8IV03 231 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 TRPC4APQ8TEL6 797 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 AGAP11Q8TF27 550 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 AZIN2Q96A70 460 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 SPATA17Q96L03 361 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 SYT15Q9BQS2 421 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 RHOXF2Q9BQY4 288 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 BCL2L13Q9BXK5 485 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 NDST4Q9H3R1 872 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 ZSWIM4Q9H7M6 989 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 ABCF3Q9NUQ8 709 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 KCTD5Q9NXV2 234 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 ZNF180Q9UJW8 692 aa9.11□□□□□ -0.95
HMGB4-204ENST00000522796 CCDC162PA2VCL2 907 aa9.1□□□□□ -0.95
HMGB4-204ENST00000522796 RNASEH2AO75792 299 aaKnown RBP9.1□□□□□ -0.95
HMGB4-204ENST00000522796 S100A1P23297 94 aa9.1□□□□□ -0.95
HMGB4-204ENST00000522796 TUBP50607 506 aa9.1□□□□□ -0.95
HMGB4-204ENST00000522796 PIP4K2BP78356 416 aa9.1□□□□□ -0.95
HMGB4-204ENST00000522796 SAFBQ15424 915 aaKnown RBP eCLIP9.1□□□□□ -0.95
HMGB4-204ENST00000522796 CRY1Q16526 586 aa9.1□□□□□ -0.95
HMGB4-204ENST00000522796 PTGISQ16647 500 aa9.1□□□□□ -0.95
HMGB4-204ENST00000522796 TTC22Q5TAA0 569 aa9.1□□□□□ -0.95
HMGB4-204ENST00000522796 HIBCHQ6NVY1 386 aaPredicted RBP9.1□□□□□ -0.95
HMGB4-204ENST00000522796 ZNF449Q6P9G9 518 aa9.1□□□□□ -0.95
HMGB4-204ENST00000522796 RASGRP2Q7LDG7 609 aa9.1□□□□□ -0.95
HMGB4-204ENST00000522796 NLRP14Q86W24 1093 aa9.1□□□□□ -0.95
HMGB4-204ENST00000522796 IFNLR1Q8IU57 520 aaPredicted RBP9.1□□□□□ -0.95
HMGB4-204ENST00000522796 DHX40Q8IX18 779 aaKnown RBP9.1□□□□□ -0.95
HMGB4-204ENST00000522796 CCDC12Q8WUD4 166 aaPredicted RBP9.1□□□□□ -0.95
HMGB4-204ENST00000522796 RNF25Q96BH1 459 aaPredicted RBP9.1□□□□□ -0.95
HMGB4-204ENST00000522796 SRPK1Q96SB4 655 aaKnown RBP9.1□□□□□ -0.95
HMGB4-204ENST00000522796 CCT8L2Q96SF2 557 aa9.1□□□□□ -0.95
HMGB4-204ENST00000522796 MRGBPQ9NV56 204 aa9.1□□□□□ -0.95
HMGB4-204ENST00000522796 ASAP1Q9ULH1 1129 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms