RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SPDYE3A6NKU9 549 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 DLL1O00548 723 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 CXCL11O14625 94 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 ALBP02768 609 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 CYP2C8P10632 490 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 NID1P14543 1247 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 SPEM2Q0P670 501 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 PABPC4Q13310 644 aaKnown RBP eCLIP7.72□□□□□ -1.17
PABPC1-220ENST00000522658 RSPO4Q2I0M5 234 aaPredicted RBP7.72□□□□□ -1.17
PABPC1-220ENST00000522658 NKAPLQ5M9Q1 402 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 NOL9Q5SY16 702 aaKnown RBP7.72□□□□□ -1.17
PABPC1-220ENST00000522658 APOBEC3HQ6NTF7 200 aaKnown RBP7.72□□□□□ -1.17
PABPC1-220ENST00000522658 USP17L2Q6R6M4 530 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 C20orf204Q6ZNR8 217 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 CCAR1Q8IX12 1150 aaKnown RBP7.72□□□□□ -1.17
PABPC1-220ENST00000522658 SCYL3Q8IZE3 742 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 SHISA4Q96DD7 197 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 NOL10Q9BSC4 688 aaKnown RBP7.72□□□□□ -1.17
PABPC1-220ENST00000522658 MRIQ9BWK5 157 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 KRTAP4-8Q9BYQ9 185 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 USP40Q9NVE5 1235 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 DENND2AQ9ULE3 1009 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 KCNH4Q9UQ05 1017 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 HDAC5Q9UQL6 1122 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 PTPRCP08575 1304 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 ADGRA2Q96PE1 1338 aa7.72□□□□□ -1.17
PABPC1-220ENST00000522658 TRIM75PA6NK02 468 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 SGPL1O95470 568 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 NBPF7P0C2Y1 421 aaPredicted RBP7.71□□□□□ -1.18
PABPC1-220ENST00000522658 FLT3LGP49771 235 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 ATP1A2P50993 1020 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 TYRO3Q06418 890 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 PICALMQ13492 652 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 GRIK5Q16478 980 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 ATP2B3Q16720 1220 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 SPTY2D1Q68D10 685 aaPredicted RBP7.71□□□□□ -1.18
PABPC1-220ENST00000522658 CDC42EP5Q6NZY7 148 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 C8orf86Q6ZUL3 223 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 NECAB2Q7Z6G3 386 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 C7orf61Q8IZ16 206 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 HSH2DQ96JZ2 352 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 DEFB118Q96PH6 123 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 SIL1Q9H173 461 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 NEUROD4Q9HD90 331 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 BRD7Q9NPI1 651 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 DAGLAQ9Y4D2 1042 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 ZHX2Q9Y6X8 837 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 DOCK2Q92608 1830 aa7.71□□□□□ -1.18
PABPC1-220ENST00000522658 A0A0G2JLL6 359 aaPredicted RBP7.7□□□□□ -1.18
PABPC1-220ENST00000522658 EYA2O00167 538 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 UBTFL1P0CB47 393 aaPredicted RBP7.7□□□□□ -1.18
PABPC1-220ENST00000522658 ELNP15502 786 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 PRDX5P30044 214 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 ADH7P40394 386 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 PDE3AQ14432 1141 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 RABL6Q3YEC7 729 aaPredicted RBP7.7□□□□□ -1.18
PABPC1-220ENST00000522658 PRRT3Q5FWE3 981 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 PRRT2Q7Z6L0 340 aaPredicted RBP7.7□□□□□ -1.18
PABPC1-220ENST00000522658 SIX5Q8N196 739 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 ANKRD13CQ8N6S4 541 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 ZNF280CQ8ND82 737 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 KLHDC4Q8TBB5 520 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 PHACTR1Q9C0D0 580 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 ABCF2Q9UG63 623 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 SLC45A1Q9Y2W3 748 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 HCN4Q9Y3Q4 1203 aa7.7□□□□□ -1.18
PABPC1-220ENST00000522658 ATP9BO43861 1147 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 ENTPD3O75355 529 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 HMGCRP04035 888 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 PTPRAP18433 802 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 RGS3P49796 1198 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 IRX3P78415 501 aaPredicted RBP7.69□□□□□ -1.18
PABPC1-220ENST00000522658 NFIAQ12857 509 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 GORABQ5T7V8 394 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 RAB44Q7Z6P3 723 aaPredicted RBP7.69□□□□□ -1.18
PABPC1-220ENST00000522658 FAM9BQ8IZU0 186 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 VGLL2Q8N8G2 317 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 SUSD3Q96L08 255 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 CEP63Q96MT8 703 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.69□□□□□ -1.18
PABPC1-220ENST00000522658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.69□□□□□ -1.18
PABPC1-220ENST00000522658 AS3MTQ9HBK9 375 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 TPSG1Q9NRR2 321 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 ZNF112Q9UJU3 913 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 GABRQQ9UN88 632 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 AGTPBP1Q9UPW5 1226 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 UTYO14607 1347 aa7.69□□□□□ -1.18
PABPC1-220ENST00000522658 PALM3A6NDB9 673 aaPredicted RBP7.68□□□□□ -1.18
PABPC1-220ENST00000522658 FAM229AH3BQW9 127 aa7.68□□□□□ -1.18
PABPC1-220ENST00000522658 CTNND1O60716 968 aaKnown RBP7.68□□□□□ -1.18
PABPC1-220ENST00000522658 CTGFP29279 349 aa7.68□□□□□ -1.18
PABPC1-220ENST00000522658 BTDP43251 543 aa7.68□□□□□ -1.18
PABPC1-220ENST00000522658 GCLCP48506 637 aaPredicted RBP7.68□□□□□ -1.18
PABPC1-220ENST00000522658 GSTO1P78417 241 aa7.68□□□□□ -1.18
PABPC1-220ENST00000522658 FAM110CQ1W6H9 321 aa7.68□□□□□ -1.18
PABPC1-220ENST00000522658 ANKRD44Q8N8A2 993 aa7.68□□□□□ -1.18
PABPC1-220ENST00000522658 TSEN2Q8NCE0 465 aaKnown RBP7.68□□□□□ -1.18
PABPC1-220ENST00000522658 PAWRQ96IZ0 340 aaKnown RBP7.68□□□□□ -1.18
PABPC1-220ENST00000522658 SMC4Q9NTJ3 1288 aa7.68□□□□□ -1.18
PABPC1-220ENST00000522658 TMOD4Q9NZQ9 345 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms