RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 AACSQ86V21 672 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 PNMA1Q8ND90 353 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 U2AF1L4Q8WU68 220 aaKnown RBP9.76□□□□□ -0.85
PVT1-213ENST00000522414 COA7Q96BR5 231 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 GCC1Q96CN9 775 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 DEFB118Q96PH6 123 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 WDR18Q9BV38 432 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 ZBED9Q6R2W3 1325 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.75□□□□□ -0.85
PVT1-213ENST00000522414 ASNSP08243 561 aa9.75□□□□□ -0.85
PVT1-213ENST00000522414 HOXB4P17483 251 aaPredicted RBP9.75□□□□□ -0.85
PVT1-213ENST00000522414 USP5P45974 858 aa9.75□□□□□ -0.85
PVT1-213ENST00000522414 SCTRP47872 440 aa9.75□□□□□ -0.85
PVT1-213ENST00000522414 GCLCP48506 637 aaPredicted RBP9.75□□□□□ -0.85
PVT1-213ENST00000522414 IRF5Q13568 498 aa9.75□□□□□ -0.85
PVT1-213ENST00000522414 UBE2Q1Q7Z7E8 422 aa9.75□□□□□ -0.85
PVT1-213ENST00000522414 SIRT2Q8IXJ6 389 aa9.75□□□□□ -0.85
PVT1-213ENST00000522414 AS3MTQ9HBK9 375 aa9.75□□□□□ -0.85
PVT1-213ENST00000522414 TXNRD2Q9NNW7 524 aa9.75□□□□□ -0.85
PVT1-213ENST00000522414 RBPJLQ9UBG7 517 aa9.75□□□□□ -0.85
PVT1-213ENST00000522414 COG6Q9Y2V7 657 aa9.75□□□□□ -0.85
PVT1-213ENST00000522414 MYO5AQ9Y4I1 1855 aaKnown RBP9.74□□□□□ -0.85
PVT1-213ENST00000522414 USP17L10C9JJH3 530 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 GH2P01242 217 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 F11P03951 625 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 HOXA7P31268 230 aaPredicted RBP9.74□□□□□ -0.85
PVT1-213ENST00000522414 PLCD1P51178 756 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 MAP3K12Q12852 859 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 CLN3Q13286 438 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 PABPC4Q13310 644 aaKnown RBP eCLIP9.74□□□□□ -0.852e-6■■■■□ 25.7
PVT1-213ENST00000522414 FAM110CQ1W6H9 321 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 SLFNL1Q499Z3 407 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 RHPN1Q8TCX5 695 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 EDC3Q96F86 508 aaKnown RBP9.74□□□□□ -0.85
PVT1-213ENST00000522414 TIMMDC1Q9NPL8 285 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 TMOD4Q9NZQ9 345 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 ZBTB21Q9ULJ3 1066 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 LAMA3Q16787 3333 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 ATAD5Q96QE3 1844 aa9.74□□□□□ -0.85
PVT1-213ENST00000522414 DDX60LQ5H9U9 1706 aaKnown RBP9.73□□□□□ -0.85
PVT1-213ENST00000522414 C19orf81C9J6K1 198 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 HLA-DOAP06340 250 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 CYP2B6P20813 491 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 MAP2K3P46734 347 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 IRX3P78415 501 aaPredicted RBP9.73□□□□□ -0.85
PVT1-213ENST00000522414 ZYXQ15942 572 aaKnown RBP9.73□□□□□ -0.85
PVT1-213ENST00000522414 WDR44Q5JSH3 913 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 SLC9C2Q5TAH2 1124 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 TATDN1Q6P1N9 297 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 ERC1Q8IUD2 1116 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 GPRC5AQ8NFJ5 357 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 ACER1Q8TDN7 264 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 RIOK1Q9BRS2 568 aaKnown RBP9.73□□□□□ -0.85
PVT1-213ENST00000522414 KRTAP9-2Q9BYQ4 174 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 FAM117AQ9C073 453 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 ZBTB40Q9NUA8 1239 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 MKL2Q9ULH7 1088 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 PCDHB9Q9Y5E1 797 aa9.73□□□□□ -0.85
PVT1-213ENST00000522414 MGAMO43451 1857 aa9.72□□□□□ -0.85
PVT1-213ENST00000522414 GOLIM4O00461 696 aa9.72□□□□□ -0.85
PVT1-213ENST00000522414 FARP2O94887 1054 aaPredicted RBP9.72□□□□□ -0.85
PVT1-213ENST00000522414 FXR1P51114 621 aaKnown RBP eCLIP9.72□□□□□ -0.85
PVT1-213ENST00000522414 HERVK_113P62684 666 aa9.72□□□□□ -0.85
PVT1-213ENST00000522414 UBAP2LQ14157 1087 aaKnown RBP9.72□□□□□ -0.85
PVT1-213ENST00000522414 RAB3GAP1Q15042 981 aa9.72□□□□□ -0.85
PVT1-213ENST00000522414 CERKLQ49MI3 558 aaPredicted RBP9.72□□□□□ -0.85
PVT1-213ENST00000522414 PAWRQ96IZ0 340 aaKnown RBP9.72□□□□□ -0.85
PVT1-213ENST00000522414 PAGR1Q9BTK6 254 aa9.72□□□□□ -0.85
PVT1-213ENST00000522414 PORCNQ9H237 461 aa9.72□□□□□ -0.85
PVT1-213ENST00000522414 SUV39H2Q9H5I1 410 aa9.72□□□□□ -0.85
PVT1-213ENST00000522414 PAK6Q9NQU5 681 aaPredicted RBP9.72□□□□□ -0.85
PVT1-213ENST00000522414 MORF4L1Q9UBU8 362 aa9.72□□□□□ -0.85
PVT1-213ENST00000522414 SERPINB13Q9UIV8 391 aa9.72□□□□□ -0.85
PVT1-213ENST00000522414 SMIM22K7EJ46 135 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 CHGBP05060 677 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 POLR3DP05423 398 aaPredicted RBP9.71□□□□□ -0.86
PVT1-213ENST00000522414 IFIT2P09913 472 aaKnown RBP9.71□□□□□ -0.86
PVT1-213ENST00000522414 FBXO45P0C2W1 286 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 CYP2D6P10635 497 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 PDE6AP16499 860 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 SHMT1P34896 483 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 ABCB5Q2M3G0 1257 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 HSP90AB4PQ58FF6 505 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 C20orf194Q5TEA3 1177 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 USP17L2Q6R6M4 530 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 LINC00114Q6XXX2 140 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 TAS1R3Q7RTX0 852 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 TTC6Q86TZ1 520 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 RPAP2Q8IXW5 612 aaPredicted RBP9.71□□□□□ -0.86
PVT1-213ENST00000522414 CLASRPQ8N2M8 674 aaKnown RBP9.71□□□□□ -0.86
PVT1-213ENST00000522414 DIS3LQ8TF46 1054 aaKnown RBP9.71□□□□□ -0.86
PVT1-213ENST00000522414 PSMG3-AS1Q96PY0 264 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 DNAJC2Q99543 621 aaKnown RBP9.71□□□□□ -0.86
PVT1-213ENST00000522414 BOLA2Q9H3K6 86 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 OSBPL3Q9H4L5 887 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 ARHGEF10LQ9HCE6 1279 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 GINM1Q9NU53 330 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 ZNF532Q9HCE3 1301 aa9.71□□□□□ -0.86
PVT1-213ENST00000522414 TCRBV5S4A2TA0A5A2 114 aa9.7□□□□□ -0.86
PVT1-213ENST00000522414 ZBBXA8MT70 800 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms