RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 IMMTQ16891 758 aaKnown RBP24.32■■□□□ 1.48
SDCBP-209ENST00000522243 C1orf53Q5VUE5 145 aa24.32■■□□□ 1.48
SDCBP-209ENST00000522243 TSEN34Q9BSV6 310 aaKnown RBP24.32■■□□□ 1.48
SDCBP-209ENST00000522243 PDLIM7Q9NR12 457 aa24.32■■□□□ 1.48
SDCBP-209ENST00000522243 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.31■■□□□ 1.48
SDCBP-209ENST00000522243 ASB14A6NK59 587 aa24.31■■□□□ 1.48
SDCBP-209ENST00000522243 SNHG28P0DPA3 235 aa24.31■■□□□ 1.48
SDCBP-209ENST00000522243 CCSAPQ6IQ19 270 aaPredicted RBP24.31■■□□□ 1.48
SDCBP-209ENST00000522243 EEPD1Q7L9B9 569 aa24.31■■□□□ 1.48
SDCBP-209ENST00000522243 IQCA1Q86XH1 822 aa24.31■■□□□ 1.48
SDCBP-209ENST00000522243 DGKHQ86XP1 1220 aa24.31■■□□□ 1.48
SDCBP-209ENST00000522243 CPVLQ9H3G5 476 aa24.31■■□□□ 1.48
SDCBP-209ENST00000522243 STARD7Q9NQZ5 370 aa24.31■■□□□ 1.48
SDCBP-209ENST00000522243 CTNNA3Q9UI47 895 aa24.31■■□□□ 1.48
SDCBP-209ENST00000522243 LRRC37A2A6NM11 1700 aa24.3■■□□□ 1.48
SDCBP-209ENST00000522243 NFIBO00712 420 aa24.3■■□□□ 1.48
SDCBP-209ENST00000522243 BAATQ14032 418 aaPredicted RBP24.3■■□□□ 1.48
SDCBP-209ENST00000522243 LRIT3Q3SXY7 679 aa24.3■■□□□ 1.48
SDCBP-209ENST00000522243 NOL8Q76FK4 1167 aaKnown RBP24.3■■□□□ 1.48
SDCBP-209ENST00000522243 BADQ92934 168 aa24.3■■□□□ 1.48
SDCBP-209ENST00000522243 UBA5Q9GZZ9 404 aa24.3■■□□□ 1.48
SDCBP-209ENST00000522243 ZSWIM5Q9P217 1185 aa24.3■■□□□ 1.48
SDCBP-209ENST00000522243 TRIM43BA6NCK2 446 aa24.29■■□□□ 1.48
SDCBP-209ENST00000522243 PQBP1O60828 265 aaKnown RBP24.29■■□□□ 1.48
SDCBP-209ENST00000522243 TRIM43Q96BQ3 446 aaPredicted RBP24.29■■□□□ 1.48
SDCBP-209ENST00000522243 ZSCAN10Q96SZ4 725 aaPredicted RBP24.29■■□□□ 1.48
SDCBP-209ENST00000522243 SPC25Q9HBM1 224 aa24.29■■□□□ 1.48
SDCBP-209ENST00000522243 PTPDC1A2A3K4 754 aa24.28■■□□□ 1.48
SDCBP-209ENST00000522243 MOXD2PA6NHM9 499 aa24.28■■□□□ 1.48
SDCBP-209ENST00000522243 PTGS1P23219 599 aa24.28■■□□□ 1.48
SDCBP-209ENST00000522243 GJA9P57773 515 aa24.28■■□□□ 1.48
SDCBP-209ENST00000522243 TNFAIP2Q03169 654 aa24.28■■□□□ 1.48
SDCBP-209ENST00000522243 FBXO16Q8IX29 292 aaPredicted RBP24.28■■□□□ 1.48
SDCBP-209ENST00000522243 PNMA1Q8ND90 353 aa24.28■■□□□ 1.48
SDCBP-209ENST00000522243 NUP133Q8WUM0 1156 aa24.28■■□□□ 1.48
SDCBP-209ENST00000522243 UPF3AQ9H1J1 476 aaKnown RBP24.28■■□□□ 1.48
SDCBP-209ENST00000522243 KAT14Q9H8E8 782 aa24.28■■□□□ 1.48
SDCBP-209ENST00000522243 PDGFCQ9NRA1 345 aa24.28■■□□□ 1.48
SDCBP-209ENST00000522243 ASGR1P07306 291 aa24.27■■□□□ 1.48
SDCBP-209ENST00000522243 CLTBP09497 229 aa24.27■■□□□ 1.48
SDCBP-209ENST00000522243 CST5P28325 142 aaPredicted RBP24.27■■□□□ 1.48
SDCBP-209ENST00000522243 BEX3Q00994 111 aa24.27■■□□□ 1.48
SDCBP-209ENST00000522243 CCDC178Q5BJE1 867 aa24.27■■□□□ 1.48
SDCBP-209ENST00000522243 GNASQ5JWF2 1037 aa24.27■■□□□ 1.48
SDCBP-209ENST00000522243 PCSK9Q8NBP7 692 aaKnown RBP24.27■■□□□ 1.48
SDCBP-209ENST00000522243 VTI1AQ96AJ9 217 aa24.27■■□□□ 1.48
SDCBP-209ENST00000522243 KRT23Q9C075 422 aa24.27■■□□□ 1.48
SDCBP-209ENST00000522243 TNKSO95271 1327 aa24.27■■□□□ 1.48
SDCBP-209ENST00000522243 CTAGE5O15320 804 aa24.26■■□□□ 1.47
SDCBP-209ENST00000522243 ITGB8P26012 769 aa24.26■■□□□ 1.47
SDCBP-209ENST00000522243 CALML3P27482 149 aa24.26■■□□□ 1.47
SDCBP-209ENST00000522243 TMEM63BQ5T3F8 832 aa24.26■■□□□ 1.47
SDCBP-209ENST00000522243 GPATCH4Q5T3I0 446 aaKnown RBP24.26■■□□□ 1.47
SDCBP-209ENST00000522243 SLC30A10Q6XR72 485 aa24.26■■□□□ 1.47
SDCBP-209ENST00000522243 ENAHQ8N8S7 591 aaPredicted RBP24.26■■□□□ 1.47
SDCBP-209ENST00000522243 CLEC4DQ8WXI8 215 aa24.26■■□□□ 1.47
SDCBP-209ENST00000522243 ANKS1AQ92625 1134 aa24.26■■□□□ 1.47
SDCBP-209ENST00000522243 GLT1D1Q96MS3 346 aa24.26■■□□□ 1.47
SDCBP-209ENST00000522243 RANBP2P49792 3224 aaKnown RBP24.26■■□□□ 1.47
SDCBP-209ENST00000522243 SMPD1P17405 629 aa24.25■■□□□ 1.47
SDCBP-209ENST00000522243 CHMLP26374 656 aa24.25■■□□□ 1.47
SDCBP-209ENST00000522243 NT5C2P49902 561 aa24.25■■□□□ 1.47
SDCBP-209ENST00000522243 ALDH5A1P51649 535 aaPredicted RBP24.25■■□□□ 1.47
SDCBP-209ENST00000522243 USH1GQ495M9 461 aa24.25■■□□□ 1.47
SDCBP-209ENST00000522243 TAPT1Q6NXT6 567 aa24.25■■□□□ 1.47
SDCBP-209ENST00000522243 Q7L0L9 218 aa24.25■■□□□ 1.47
SDCBP-209ENST00000522243 GNEQ9Y223 722 aaKnown RBP24.25■■□□□ 1.47
SDCBP-209ENST00000522243 PTH1RQ03431 593 aa24.24■■□□□ 1.47
SDCBP-209ENST00000522243 SHHQ15465 462 aa24.24■■□□□ 1.47
SDCBP-209ENST00000522243 RNF207Q6ZRF8 634 aa24.24■■□□□ 1.47
SDCBP-209ENST00000522243 RUFY2Q8WXA3 655 aa24.24■■□□□ 1.47
SDCBP-209ENST00000522243 UBAC1Q9BSL1 405 aa24.24■■□□□ 1.47
SDCBP-209ENST00000522243 CNNM2Q9H8M5 875 aa24.24■■□□□ 1.47
SDCBP-209ENST00000522243 TMEM39AQ9NV64 488 aa24.24■■□□□ 1.47
SDCBP-209ENST00000522243 ADD3Q9UEY8 706 aaKnown RBP24.24■■□□□ 1.47
SDCBP-209ENST00000522243 WDR19Q8NEZ3 1342 aa24.24■■□□□ 1.47
SDCBP-209ENST00000522243 RAD50Q92878 1312 aa24.24■■□□□ 1.47
SDCBP-209ENST00000522243 DCDC2CA8MYV0 355 aa24.23■■□□□ 1.47
SDCBP-209ENST00000522243 DYNC1LI2O43237 492 aaPredicted RBP24.23■■□□□ 1.47
SDCBP-209ENST00000522243 FAAP100Q0VG06 881 aa24.23■■□□□ 1.47
SDCBP-209ENST00000522243 C9orf50Q5SZB4 431 aa24.23■■□□□ 1.47
SDCBP-209ENST00000522243 KIAA1211Q6ZU35 1233 aa24.23■■□□□ 1.47
SDCBP-209ENST00000522243 ANKRD33Q7Z3H0 272 aa24.23■■□□□ 1.47
SDCBP-209ENST00000522243 TLK2Q86UE8 772 aa24.23■■□□□ 1.47
SDCBP-209ENST00000522243 PNMA2Q9UL42 364 aa24.23■■□□□ 1.47
SDCBP-209ENST00000522243 ELP1O95163 1332 aa24.22■■□□□ 1.47
SDCBP-209ENST00000522243 RAG1P15918 1043 aa24.22■■□□□ 1.47
SDCBP-209ENST00000522243 RPS6P62753 249 aaKnown RBP24.22■■□□□ 1.47
SDCBP-209ENST00000522243 CDC37Q16543 378 aaPredicted RBP24.22■■□□□ 1.47
SDCBP-209ENST00000522243 IQSEC1Q6DN90 963 aa24.22■■□□□ 1.47
SDCBP-209ENST00000522243 CYB5R4Q7L1T6 521 aa24.22■■□□□ 1.47
SDCBP-209ENST00000522243 MORC4Q8TE76 937 aa24.22■■□□□ 1.47
SDCBP-209ENST00000522243 TOX2Q96NM4 488 aa24.22■■□□□ 1.47
SDCBP-209ENST00000522243 AP5M1Q9H0R1 490 aa24.22■■□□□ 1.47
SDCBP-209ENST00000522243 VAT1LQ9HCJ6 419 aa24.22■■□□□ 1.47
SDCBP-209ENST00000522243 VTA1Q9NP79 307 aa24.22■■□□□ 1.47
SDCBP-209ENST00000522243 DNAH12Q6ZR08 3092 aa24.21■■□□□ 1.47
SDCBP-209ENST00000522243 KIAA0355O15063 1070 aa24.21■■□□□ 1.47
SDCBP-209ENST00000522243 PARP1P09874 1014 aaKnown RBP24.21■■□□□ 1.47
SDCBP-209ENST00000522243 NKX3-2P78367 333 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms