RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SLC38A10Q9HBR0 1119 aa15.01□□□□□ -0.01
CPNE3-205ENST00000522240 KCNJ14Q9UNX9 436 aa15.01□□□□□ -0.01
CPNE3-205ENST00000522240 TLL2Q9Y6L7 1015 aa15.01□□□□□ -0.01
CPNE3-205ENST00000522240 GNA11P29992 359 aa15□□□□□ -0.01
CPNE3-205ENST00000522240 GTF2A2P52657 109 aa15□□□□□ -0.01
CPNE3-205ENST00000522240 MOGSQ13724 837 aa15□□□□□ -0.01
CPNE3-205ENST00000522240 GNL2Q13823 731 aaKnown RBP15□□□□□ -0.01
CPNE3-205ENST00000522240 NBR1Q14596 966 aa15□□□□□ -0.01
CPNE3-205ENST00000522240 COG2Q14746 738 aa15□□□□□ -0.01
CPNE3-205ENST00000522240 DEFB115Q30KQ5 88 aa15□□□□□ -0.01
CPNE3-205ENST00000522240 SPRYD7Q5W111 196 aa15□□□□□ -0.01
CPNE3-205ENST00000522240 SAPCD2Q86UD0 394 aa15□□□□□ -0.01
CPNE3-205ENST00000522240 BICD2Q8TD16 824 aa15□□□□□ -0.01
CPNE3-205ENST00000522240 HHIPL1Q96JK4 782 aa15□□□□□ -0.01
CPNE3-205ENST00000522240 C6orf50Q9HD87 102 aa15□□□□□ -0.01
CPNE3-205ENST00000522240 PCDHA4Q9UN74 947 aa15□□□□□ -0.01
CPNE3-205ENST00000522240 ABCB11O95342 1321 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 KIF28PB7ZC32 967 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 ZBED4O75132 1171 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 ICAM1P05362 532 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 CETPP11597 493 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 OAZ1P54368 228 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 MAP2K1Q02750 393 aaPredicted RBP14.99□□□□□ -0.01
CPNE3-205ENST00000522240 TPRNQ4KMQ1 711 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 TREML2Q5T2D2 321 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 ATL3Q6DD88 541 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 LBX2Q6XYB7 198 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 RASAL3Q86YV0 1011 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 NOSTRINQ8IVI9 506 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 BLIDQ8IZY5 108 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 TNFRSF25Q93038 417 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 COA7Q96BR5 231 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 ADAMTS5Q9UNA0 930 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 SLC45A1Q9Y2W3 748 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 PCDHA1Q9Y5I3 950 aa14.99□□□□□ -0.01
CPNE3-205ENST00000522240 COL11A1P12107 1806 aaPredicted RBP14.99□□□□□ -0.01
CPNE3-205ENST00000522240 ZNF536O15090 1300 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 SMCO2A6NFE2 343 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 SPDYE16A6NNV3 312 aaPredicted RBP14.98□□□□□ -0.01
CPNE3-205ENST00000522240 BTBD18B2RXH4 712 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 M0R2N6 131 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 VWA5AO00534 786 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 ATP2A1O14983 1001 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 BAG4O95429 457 aaKnown RBP14.98□□□□□ -0.01
CPNE3-205ENST00000522240 ADCY7P51828 1080 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 IRX3P78415 501 aaPredicted RBP14.98□□□□□ -0.01
CPNE3-205ENST00000522240 RGMBQ6NW40 437 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 MB21D1Q8N884 522 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 REPS2Q8NFH8 660 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 ATG4CQ96DT6 458 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 MS4A4AQ96JQ5 239 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 RIC8AQ9NPQ8 531 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 HOXC10Q9NYD6 342 aa14.98□□□□□ -0.01
CPNE3-205ENST00000522240 CTDP1Q9Y5B0 961 aaPredicted RBP14.98□□□□□ -0.01
CPNE3-205ENST00000522240 SLC10A3P09131 477 aa14.97□□□□□ -0.01
CPNE3-205ENST00000522240 PRKAR2AP13861 404 aaKnown RBP14.97□□□□□ -0.01
CPNE3-205ENST00000522240 SNAP25P60880 206 aa14.97□□□□□ -0.01
CPNE3-205ENST00000522240 KRT85P78386 507 aa14.97□□□□□ -0.01
CPNE3-205ENST00000522240 NR5A1Q13285 461 aa14.97□□□□□ -0.01
CPNE3-205ENST00000522240 MYSM1Q5VVJ2 828 aa14.97□□□□□ -0.01
CPNE3-205ENST00000522240 MCTP2Q6DN12 878 aa14.97□□□□□ -0.01
CPNE3-205ENST00000522240 GPAT2Q6NUI2 795 aa14.97□□□□□ -0.01
CPNE3-205ENST00000522240 OXER1Q8TDS5 423 aa14.97□□□□□ -0.01
CPNE3-205ENST00000522240 GTF3C2Q8WUA4 911 aaPredicted RBP14.97□□□□□ -0.01
CPNE3-205ENST00000522240 CUL5Q93034 780 aa14.97□□□□□ -0.01
CPNE3-205ENST00000522240 PNMA3Q9UL41 463 aa14.97□□□□□ -0.01
CPNE3-205ENST00000522240 CCPG1Q9ULG6 757 aa14.97□□□□□ -0.01
CPNE3-205ENST00000522240 MRPL11Q9Y3B7 192 aaKnown RBP14.97□□□□□ -0.01
CPNE3-205ENST00000522240 CCL15-CCL14A0A0B4J2E2 113 aa14.96□□□□□ -0.01
CPNE3-205ENST00000522240 OSBPP22059 807 aa14.96□□□□□ -0.01
CPNE3-205ENST00000522240 CLK2P49760 499 aaKnown RBP14.96□□□□□ -0.01
CPNE3-205ENST00000522240 ZNF157P51786 506 aaPredicted RBP14.96□□□□□ -0.01
CPNE3-205ENST00000522240 MRPL12P52815 198 aaKnown RBP14.96□□□□□ -0.01
CPNE3-205ENST00000522240 CCL15Q16663 113 aa14.96□□□□□ -0.01
CPNE3-205ENST00000522240 USH1GQ495M9 461 aa14.96□□□□□ -0.01
CPNE3-205ENST00000522240 CCDC174Q6PII3 467 aa14.96□□□□□ -0.01
CPNE3-205ENST00000522240 KRT25Q7Z3Z0 450 aa14.96□□□□□ -0.01
CPNE3-205ENST00000522240 ANKRD23Q86SG2 305 aa14.96□□□□□ -0.01
CPNE3-205ENST00000522240 REXO1Q8N1G1 1221 aaKnown RBP14.96□□□□□ -0.01
CPNE3-205ENST00000522240 ZNF396Q96N95 335 aaPredicted RBP14.96□□□□□ -0.01
CPNE3-205ENST00000522240 MAF1Q9H063 256 aa14.96□□□□□ -0.01
CPNE3-205ENST00000522240 ASCC2Q9H1I8 757 aaPredicted RBP14.96□□□□□ -0.01
CPNE3-205ENST00000522240 TESPA1A2RU30 521 aaPredicted RBP14.95□□□□□ -0.02
CPNE3-205ENST00000522240 MANSC4A6NHS7 340 aaPredicted RBP14.95□□□□□ -0.02
CPNE3-205ENST00000522240 GHRHRQ02643 423 aa14.95□□□□□ -0.02
CPNE3-205ENST00000522240 DNM1Q05193 864 aaKnown RBP14.95□□□□□ -0.02
CPNE3-205ENST00000522240 AP3B2Q13367 1082 aa14.95□□□□□ -0.02
CPNE3-205ENST00000522240 TKFCQ3LXA3 575 aa14.95□□□□□ -0.02
CPNE3-205ENST00000522240 RILPL1Q5EBL4 403 aa14.95□□□□□ -0.02
CPNE3-205ENST00000522240 SAMD3Q8N6K7 520 aa14.95□□□□□ -0.02
CPNE3-205ENST00000522240 BRI3BPQ8WY22 251 aa14.95□□□□□ -0.02
CPNE3-205ENST00000522240 PSTPIP2Q9H939 334 aa14.95□□□□□ -0.02
CPNE3-205ENST00000522240 ZCCHC17Q9NP64 241 aaKnown RBP14.95□□□□□ -0.02
CPNE3-205ENST00000522240 ZNF214Q9UL59 606 aaPredicted RBP14.95□□□□□ -0.02
CPNE3-205ENST00000522240 GOLGA6L22H0YM25 854 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 PIK3CDO00329 1044 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 OPLAHO14841 1288 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 TRAPPC10P48553 1259 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 LBX1P52954 281 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 HERVK_113P62684 666 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms