RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 RIPK3Q9Y572 518 aa15.38■□□□□ 0.05
CLK4-210ENST00000522136 CNMDO75829 334 aa15.38■□□□□ 0.05
CLK4-210ENST00000522136 ALAS1P13196 640 aa15.38■□□□□ 0.05
CLK4-210ENST00000522136 PDIA4P13667 645 aaKnown RBP15.38■□□□□ 0.05
CLK4-210ENST00000522136 SAFBQ15424 915 aaKnown RBP eCLIP15.38■□□□□ 0.05
CLK4-210ENST00000522136 BLIDQ8IZY5 108 aa15.38■□□□□ 0.05
CLK4-210ENST00000522136 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
CLK4-210ENST00000522136 TBC1D5Q92609 795 aa15.38■□□□□ 0.05
CLK4-210ENST00000522136 RBPJLQ9UBG7 517 aa15.38■□□□□ 0.05
CLK4-210ENST00000522136 PCDHA4Q9UN74 947 aa15.38■□□□□ 0.05
CLK4-210ENST00000522136 SLC45A1Q9Y2W3 748 aa15.38■□□□□ 0.05
CLK4-210ENST00000522136 A0A0G2JMZ2 1700 aa15.37■□□□□ 0.05
CLK4-210ENST00000522136 CALML3P27482 149 aa15.37■□□□□ 0.05
CLK4-210ENST00000522136 KRT2P35908 639 aa15.37■□□□□ 0.05
CLK4-210ENST00000522136 ADCY7P51828 1080 aa15.37■□□□□ 0.05
CLK4-210ENST00000522136 GNL2Q13823 731 aaKnown RBP15.37■□□□□ 0.05
CLK4-210ENST00000522136 UBE2SQ16763 222 aa15.37■□□□□ 0.05
CLK4-210ENST00000522136 MUM1L1Q5H9M0 696 aa15.37■□□□□ 0.05
CLK4-210ENST00000522136 EARS2Q5JPH6 523 aaKnown RBP15.37■□□□□ 0.05
CLK4-210ENST00000522136 SNRNP48Q6IEG0 339 aaKnown RBP15.37■□□□□ 0.05
CLK4-210ENST00000522136 PPP1R18Q6NYC8 613 aa15.37■□□□□ 0.05
CLK4-210ENST00000522136 RGS22Q8NE09 1264 aa15.37■□□□□ 0.05
CLK4-210ENST00000522136 TNPO1Q92973 898 aaKnown RBP15.37■□□□□ 0.05
CLK4-210ENST00000522136 PSTPIP2Q9H939 334 aa15.37■□□□□ 0.05
CLK4-210ENST00000522136 C6orf50Q9HD87 102 aa15.37■□□□□ 0.05
CLK4-210ENST00000522136 TMEM260Q9NX78 707 aa15.37■□□□□ 0.05
CLK4-210ENST00000522136 PNMA3Q9UL41 463 aa15.37■□□□□ 0.05
CLK4-210ENST00000522136 ESYT2A0FGR8 921 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 FAM205CA6NFA0 338 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 U2AF2P26368 475 aaKnown RBP eCLIP15.36■□□□□ 0.051e-7■□□□□ 8
CLK4-210ENST00000522136 STAT3P40763 770 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 Q3C1V9 767 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 USP17L6PQ6QN14 398 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 IFNL1Q8IU54 200 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 SMCR8Q8TEV9 937 aaPredicted RBP15.36■□□□□ 0.05
CLK4-210ENST00000522136 CLEC4DQ8WXI8 215 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 RIC8AQ9NPQ8 531 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 BIN2Q9UBW5 565 aaPredicted RBP15.36■□□□□ 0.05
CLK4-210ENST00000522136 ABCB11O95342 1321 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 TCHHQ07283 1943 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 M0R2N6 131 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 NFIBO00712 420 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 ATP2A1O14983 1001 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 GNA11P29992 359 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 MB21D1Q8N884 522 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 DAGLBQ8NCG7 672 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 TNFRSF25Q93038 417 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 TRERF1Q96PN7 1200 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 TEX13BQ9BXU2 312 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 BRMS1Q9HCU9 246 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 PCDHA6Q9UN73 950 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 MRPL11Q9Y3B7 192 aaKnown RBP15.36■□□□□ 0.05
CLK4-210ENST00000522136 PCDHA8Q9Y5H6 950 aa15.36■□□□□ 0.05
CLK4-210ENST00000522136 OAZ1P54368 228 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 INHBEP58166 350 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 JAKMIP3Q5VZ66 844 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 FAM177A1Q8N128 213 aaPredicted RBP15.35■□□□□ 0.05
CLK4-210ENST00000522136 CUL5Q93034 780 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 FOXP1Q9H334 677 aaPredicted RBP15.35■□□□□ 0.05
CLK4-210ENST00000522136 R3HDMLQ9H3Y0 253 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 MEIS2O14770 477 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 CFBP00751 764 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 HOXA13P31271 388 aaPredicted RBP15.35■□□□□ 0.05
CLK4-210ENST00000522136 TM4SF4P48230 202 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 MRPL12P52815 198 aaKnown RBP15.35■□□□□ 0.05
CLK4-210ENST00000522136 SREBF2Q12772 1141 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 TRAF1Q13077 416 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 NOGQ13253 232 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 GALNT17Q6IS24 598 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 NOSTRINQ8IVI9 506 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 ANKRD13CQ8N6S4 541 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 PGBD1Q96JS3 809 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 SPATC1LQ9H0A9 340 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 ZSCAN16Q9H4T2 348 aaPredicted RBP15.35■□□□□ 0.05
CLK4-210ENST00000522136 RNF146Q9NTX7 359 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 RABGAP1Q9Y3P9 1069 aa15.35■□□□□ 0.05
CLK4-210ENST00000522136 TAF1CQ15572 869 aaPredicted RBP15.34■□□□□ 0.05
CLK4-210ENST00000522136 REXO1Q8N1G1 1221 aaKnown RBP15.34■□□□□ 0.05
CLK4-210ENST00000522136 PARK7Q99497 189 aaKnown RBP15.34■□□□□ 0.05
CLK4-210ENST00000522136 MOV10L1Q9BXT6 1211 aaKnown RBP15.34■□□□□ 0.05
CLK4-210ENST00000522136 MYH15Q9Y2K3 1946 aa15.33■□□□□ 0.05
CLK4-210ENST00000522136 CLK2P49760 499 aaKnown RBP15.33■□□□□ 0.05
CLK4-210ENST00000522136 VEGFBP49765 207 aa15.33■□□□□ 0.05
CLK4-210ENST00000522136 PIK3AP1Q6ZUJ8 805 aa15.33■□□□□ 0.05
CLK4-210ENST00000522136 BICD2Q8TD16 824 aa15.33■□□□□ 0.05
CLK4-210ENST00000522136 ERVK-9P63128 1117 aa15.33■□□□□ 0.04
CLK4-210ENST00000522136 ERVK-24P63145 666 aa15.33■□□□□ 0.04
CLK4-210ENST00000522136 DNM1Q05193 864 aaKnown RBP15.33■□□□□ 0.04
CLK4-210ENST00000522136 BRAPQ7Z569 592 aa15.33■□□□□ 0.04
CLK4-210ENST00000522136 RIOX2Q8IUF8 465 aa15.33■□□□□ 0.04
CLK4-210ENST00000522136 TFIP11Q9UBB9 837 aaKnown RBP15.33■□□□□ 0.04
CLK4-210ENST00000522136 PNMA2Q9UL42 364 aa15.33■□□□□ 0.04
CLK4-210ENST00000522136 GCOM1H8Y6P7 765 aaPredicted RBP15.32■□□□□ 0.04
CLK4-210ENST00000522136 POLR2MP0CAP2 368 aa15.32■□□□□ 0.04
CLK4-210ENST00000522136 ATP2B1P20020 1258 aa15.32■□□□□ 0.04
CLK4-210ENST00000522136 NBR1Q14596 966 aa15.32■□□□□ 0.04
CLK4-210ENST00000522136 MYSM1Q5VVJ2 828 aa15.32■□□□□ 0.04
CLK4-210ENST00000522136 NSMFQ6X4W1 530 aa15.32■□□□□ 0.04
CLK4-210ENST00000522136 FCHSD1Q86WN1 690 aa15.32■□□□□ 0.04
CLK4-210ENST00000522136 NCAPG2Q86XI2 1143 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms