RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 SEMA6BQ9H3T3 888 aa13.35□□□□□ -0.27
CSMD1-210ENST00000521646 EPB41L4AQ9HCS5 686 aaPredicted RBP13.35□□□□□ -0.27
CSMD1-210ENST00000521646 PHF24Q9UPV7 400 aa13.35□□□□□ -0.27
CSMD1-210ENST00000521646 DDX49Q9Y6V7 483 aaKnown RBP13.35□□□□□ -0.27
CSMD1-210ENST00000521646 WDR46O15213 610 aaKnown RBP13.34□□□□□ -0.27
CSMD1-210ENST00000521646 SNAI1O95863 264 aaPredicted RBP13.34□□□□□ -0.27
CSMD1-210ENST00000521646 ADH1BP00325 375 aa13.34□□□□□ -0.27
CSMD1-210ENST00000521646 RASA1P20936 1047 aa13.34□□□□□ -0.27
CSMD1-210ENST00000521646 C1orf53Q5VUE5 145 aa13.34□□□□□ -0.27
CSMD1-210ENST00000521646 CCSAPQ6IQ19 270 aaPredicted RBP13.34□□□□□ -0.27
CSMD1-210ENST00000521646 RIOX2Q8IUF8 465 aa13.34□□□□□ -0.27
CSMD1-210ENST00000521646 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
CSMD1-210ENST00000521646 MB21D1Q8N884 522 aa13.34□□□□□ -0.27
CSMD1-210ENST00000521646 MYLIPQ8WY64 445 aa13.34□□□□□ -0.27
CSMD1-210ENST00000521646 LBHD1Q9BQE6 289 aaPredicted RBP13.34□□□□□ -0.27
CSMD1-210ENST00000521646 MROH8Q9H579 483 aa13.34□□□□□ -0.27
CSMD1-210ENST00000521646 SWAP70Q9UH65 585 aa13.34□□□□□ -0.27
CSMD1-210ENST00000521646 PPP1R9AQ9ULJ8 1098 aa13.34□□□□□ -0.27
CSMD1-210ENST00000521646 ROBO3Q96MS0 1386 aa13.33□□□□□ -0.27
CSMD1-210ENST00000521646 A0A1W2PQ45 241 aaPredicted RBP13.33□□□□□ -0.28
CSMD1-210ENST00000521646 A0A1W2PQY0 241 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 GSG1L2A8MUP6 293 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 S1PR4O95977 384 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 IFIT2P09913 472 aaKnown RBP13.33□□□□□ -0.28
CSMD1-210ENST00000521646 CD46P15529 392 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 CLCN1P35523 988 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 USP38Q8NB14 1042 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 ARRDC4Q8NCT1 418 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 OSBP2Q969R2 916 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 MMP19Q99542 508 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 SPSB2Q99619 263 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 TINF2Q9BSI4 451 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 GPCPD1Q9NPB8 672 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 XPNPEP3Q9NQH7 507 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 ATP8A2Q9NTI2 1148 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 SLC4A4Q9Y6R1 1079 aa13.33□□□□□ -0.28
CSMD1-210ENST00000521646 DNAJC25-GNG10A0A024R161 153 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 IGKV6D-41A0A0C4DH26 115 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 KBTBD13C9JR72 458 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 RNF223E7ERA6 249 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 CTAGE5O15320 804 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 FCER1AP12319 257 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 FAAP100Q0VG06 881 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 UBE3CQ15386 1083 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 C16orf59Q7L2K0 433 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 RASGRP2Q7LDG7 609 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 RPAP2Q8IXW5 612 aaPredicted RBP13.32□□□□□ -0.28
CSMD1-210ENST00000521646 STRBPQ96SI9 672 aaKnown RBP13.32□□□□□ -0.28
CSMD1-210ENST00000521646 SLC6A16Q9GZN6 736 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 ARHGEF10LQ9HCE6 1279 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 SYNRGQ9UMZ2 1314 aa13.32□□□□□ -0.28
CSMD1-210ENST00000521646 LCTP09848 1927 aa13.31□□□□□ -0.28
CSMD1-210ENST00000521646 NDUFB10O96000 172 aa13.31□□□□□ -0.28
CSMD1-210ENST00000521646 STAT3P40763 770 aa13.31□□□□□ -0.28
CSMD1-210ENST00000521646 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
CSMD1-210ENST00000521646 ZNF697Q5TEC3 545 aa13.31□□□□□ -0.28
CSMD1-210ENST00000521646 KLHDC9Q8NEP7 349 aa13.31□□□□□ -0.28
CSMD1-210ENST00000521646 KATNBL1Q9H079 304 aa13.31□□□□□ -0.28
CSMD1-210ENST00000521646 SLC27A5Q9Y2P5 690 aa13.31□□□□□ -0.28
CSMD1-210ENST00000521646 TACC3Q9Y6A5 838 aa13.31□□□□□ -0.28
CSMD1-210ENST00000521646 V9GY48 417 aaPredicted RBP13.31□□□□□ -0.28
CSMD1-210ENST00000521646 ASTN1O14525 1302 aa13.31□□□□□ -0.28
CSMD1-210ENST00000521646 MYH4Q9Y623 1939 aa13.31□□□□□ -0.28
CSMD1-210ENST00000521646 LRRC37A2A6NM11 1700 aa13.3□□□□□ -0.28
CSMD1-210ENST00000521646 M0R2C6 588 aa13.3□□□□□ -0.28
CSMD1-210ENST00000521646 KIAA0355O15063 1070 aa13.3□□□□□ -0.28
CSMD1-210ENST00000521646 PQBP1O60828 265 aaKnown RBP13.3□□□□□ -0.28
CSMD1-210ENST00000521646 TMEM63BQ5T3F8 832 aa13.3□□□□□ -0.28
CSMD1-210ENST00000521646 CCDC17Q96LX7 622 aa13.3□□□□□ -0.28
CSMD1-210ENST00000521646 KANSL2Q9H9L4 492 aa13.3□□□□□ -0.28
CSMD1-210ENST00000521646 PRDM6Q9NQX0 595 aa13.3□□□□□ -0.28
CSMD1-210ENST00000521646 GRXCR1A8MXD5 290 aa13.29□□□□□ -0.28
CSMD1-210ENST00000521646 FOXP2O15409 715 aa13.29□□□□□ -0.28
CSMD1-210ENST00000521646 RAB11FIP3O75154 756 aa13.29□□□□□ -0.28
CSMD1-210ENST00000521646 PRDM1O75626 825 aa13.29□□□□□ -0.28
CSMD1-210ENST00000521646 SLC25A27O95847 323 aa13.29□□□□□ -0.28
CSMD1-210ENST00000521646 CLTBP09497 229 aa13.29□□□□□ -0.28
CSMD1-210ENST00000521646 RARBP10826 455 aa13.29□□□□□ -0.28
CSMD1-210ENST00000521646 SMAD3P84022 425 aaKnown RBP13.29□□□□□ -0.28
CSMD1-210ENST00000521646 GRIN2CQ14957 1233 aa13.29□□□□□ -0.28
CSMD1-210ENST00000521646 MAFAQ8NHW3 353 aaPredicted RBP13.29□□□□□ -0.28
CSMD1-210ENST00000521646 SEC62Q99442 399 aaKnown RBP13.29□□□□□ -0.28
CSMD1-210ENST00000521646 TBX21Q9UL17 535 aa13.29□□□□□ -0.28
CSMD1-210ENST00000521646 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.28□□□□□ -0.28
CSMD1-210ENST00000521646 F5H6K3 240 aa13.28□□□□□ -0.28
CSMD1-210ENST00000521646 RAD21O60216 631 aa13.28□□□□□ -0.28
CSMD1-210ENST00000521646 KDM4AO75164 1064 aa13.28□□□□□ -0.28
CSMD1-210ENST00000521646 ACLYP53396 1101 aa13.28□□□□□ -0.28
CSMD1-210ENST00000521646 KLRC3Q07444 240 aa13.28□□□□□ -0.28
CSMD1-210ENST00000521646 KCNA10Q16322 511 aa13.28□□□□□ -0.28
CSMD1-210ENST00000521646 SBK1Q52WX2 424 aa13.28□□□□□ -0.28
CSMD1-210ENST00000521646 SNRNP48Q6IEG0 339 aaKnown RBP13.28□□□□□ -0.28
CSMD1-210ENST00000521646 ANKRD33Q7Z3H0 272 aa13.28□□□□□ -0.28
CSMD1-210ENST00000521646 OTUD7AQ8TE49 926 aaPredicted RBP13.28□□□□□ -0.28
CSMD1-210ENST00000521646 VWCEQ96DN2 955 aa13.28□□□□□ -0.28
CSMD1-210ENST00000521646 RAVER2Q9HCJ3 691 aaKnown RBP13.28□□□□□ -0.28
CSMD1-210ENST00000521646 INCENPQ9NQS7 918 aa13.28□□□□□ -0.28
CSMD1-210ENST00000521646 PRKAG2Q9UGJ0 569 aa13.28□□□□□ -0.28
CSMD1-210ENST00000521646 DIS3Q9Y2L1 958 aaKnown RBP13.28□□□□□ -0.28
CSMD1-210ENST00000521646 AKR1A1P14550 325 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms