RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 CDC37Q16543 378 aaPredicted RBP18.95■□□□□ 0.62
TNPO1-212ENST00000520850 CTCFLQ8NI51 663 aaPredicted RBP18.95■□□□□ 0.62
TNPO1-212ENST00000520850 CLEC4DQ8WXI8 215 aa18.95■□□□□ 0.62
TNPO1-212ENST00000520850 AGXT2Q9BYV1 514 aa18.95■□□□□ 0.62
TNPO1-212ENST00000520850 MAP3K20Q9NYL2 800 aaKnown RBP18.95■□□□□ 0.62
TNPO1-212ENST00000520850 ZBTB5O15062 677 aa18.94■□□□□ 0.62
TNPO1-212ENST00000520850 CYBAP13498 195 aa18.94■□□□□ 0.62
TNPO1-212ENST00000520850 EN2P19622 333 aaPredicted RBP18.94■□□□□ 0.62
TNPO1-212ENST00000520850 ANAPC15P60006 121 aa18.94■□□□□ 0.62
TNPO1-212ENST00000520850 SNAP25P60880 206 aa18.94■□□□□ 0.62
TNPO1-212ENST00000520850 BLOC1S2Q6QNY1 142 aa18.94■□□□□ 0.62
TNPO1-212ENST00000520850 SYNE3Q6ZMZ3 975 aa18.94■□□□□ 0.62
TNPO1-212ENST00000520850 NFXL1Q6ZNB6 911 aa18.94■□□□□ 0.62
TNPO1-212ENST00000520850 ANKLE1Q8NAG6 615 aa18.94■□□□□ 0.62
TNPO1-212ENST00000520850 IL17RAQ96F46 866 aa18.94■□□□□ 0.62
TNPO1-212ENST00000520850 SPZ1Q9BXG8 430 aa18.94■□□□□ 0.62
TNPO1-212ENST00000520850 GPHNQ9NQX3 736 aaPredicted RBP18.94■□□□□ 0.62
TNPO1-212ENST00000520850 CYP39A1Q9NYL5 469 aa18.94■□□□□ 0.62
TNPO1-212ENST00000520850 ABCB11O95342 1321 aa18.94■□□□□ 0.62
TNPO1-212ENST00000520850 POTEB2H3BUK9 544 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 CYP2C19P33261 490 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 SLC4A3P48751 1232 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 GHRHRQ02643 423 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 QRICH1Q2TAL8 776 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 MUM1L1Q5H9M0 696 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 FBXO11Q86XK2 927 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 FANCBQ8NB91 859 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 JAKMIP1Q96N16 626 aaKnown RBP18.93■□□□□ 0.62
TNPO1-212ENST00000520850 DEFB118Q96PH6 123 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 AMNQ9BXJ7 453 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 CPVLQ9H3G5 476 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 ZSWIM6Q9HCJ5 1215 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 HOMER2Q9NSB8 354 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 OGDHLQ9ULD0 1010 aa18.93■□□□□ 0.62
TNPO1-212ENST00000520850 MRPL11Q9Y3B7 192 aaKnown RBP18.93■□□□□ 0.62
TNPO1-212ENST00000520850 PLXNA1Q9UIW2 1896 aa18.92■□□□□ 0.62
TNPO1-212ENST00000520850 SMCHD1A6NHR9 2005 aa18.92■□□□□ 0.62
TNPO1-212ENST00000520850 PNMA6FA0A0J9YX94 578 aa18.92■□□□□ 0.62
TNPO1-212ENST00000520850 SEPT4O43236 478 aa18.92■□□□□ 0.62
TNPO1-212ENST00000520850 CYTH3O43739 400 aa18.92■□□□□ 0.62
TNPO1-212ENST00000520850 RPS6KB1P23443 525 aa18.92■□□□□ 0.62
TNPO1-212ENST00000520850 EVCP57679 992 aa18.92■□□□□ 0.62
TNPO1-212ENST00000520850 MLLT1Q03111 559 aaPredicted RBP18.92■□□□□ 0.62
TNPO1-212ENST00000520850 LHX8Q68G74 356 aa18.92■□□□□ 0.62
TNPO1-212ENST00000520850 MCF2L2Q86YR7 1114 aa18.92■□□□□ 0.62
TNPO1-212ENST00000520850 MORC4Q8TE76 937 aa18.92■□□□□ 0.62
TNPO1-212ENST00000520850 NUP133Q8WUM0 1156 aa18.92■□□□□ 0.62
TNPO1-212ENST00000520850 FGD4Q96M96 766 aa18.92■□□□□ 0.62
TNPO1-212ENST00000520850 ADD3Q9UEY8 706 aaKnown RBP18.92■□□□□ 0.62
TNPO1-212ENST00000520850 ASB14A6NK59 587 aa18.91■□□□□ 0.62
TNPO1-212ENST00000520850 MYCP01106 439 aaPredicted RBP18.91■□□□□ 0.62
TNPO1-212ENST00000520850 SLC35G1Q2M3R5 365 aa18.91■□□□□ 0.62
TNPO1-212ENST00000520850 APOA5Q6Q788 366 aa18.91■□□□□ 0.62
TNPO1-212ENST00000520850 RUFY3Q7L099 469 aa18.91■□□□□ 0.62
TNPO1-212ENST00000520850 UBE2Q1Q7Z7E8 422 aa18.91■□□□□ 0.62
TNPO1-212ENST00000520850 DNERQ8NFT8 737 aa18.91■□□□□ 0.62
TNPO1-212ENST00000520850 SHISA4Q96DD7 197 aa18.91■□□□□ 0.62
TNPO1-212ENST00000520850 ABHD16BQ9H3Z7 469 aa18.91■□□□□ 0.62
TNPO1-212ENST00000520850 VAT1LQ9HCJ6 419 aa18.91■□□□□ 0.62
TNPO1-212ENST00000520850 RBM28Q9NW13 759 aaKnown RBP18.91■□□□□ 0.62
TNPO1-212ENST00000520850 NFIBO00712 420 aa18.9■□□□□ 0.62
TNPO1-212ENST00000520850 DHX16O60231 1041 aaKnown RBP18.9■□□□□ 0.62
TNPO1-212ENST00000520850 SNAI1O95863 264 aaPredicted RBP18.9■□□□□ 0.62
TNPO1-212ENST00000520850 TFRCP02786 760 aaKnown RBP18.9■□□□□ 0.62
TNPO1-212ENST00000520850 CCND3P30281 292 aaPredicted RBP18.9■□□□□ 0.62
TNPO1-212ENST00000520850 RNF207Q6ZRF8 634 aa18.9■□□□□ 0.62
TNPO1-212ENST00000520850 TRPV1Q8NER1 839 aa18.9■□□□□ 0.62
TNPO1-212ENST00000520850 LRRC2Q9BYS8 371 aa18.9■□□□□ 0.62
TNPO1-212ENST00000520850 DDX20Q9UHI6 824 aaKnown RBP18.9■□□□□ 0.62
TNPO1-212ENST00000520850 SOWAHBA6NEL2 793 aa18.89■□□□□ 0.61
TNPO1-212ENST00000520850 ZNF865P0CJ78 1059 aaPredicted RBP18.89■□□□□ 0.61
TNPO1-212ENST00000520850 BAATQ14032 418 aaPredicted RBP18.89■□□□□ 0.61
TNPO1-212ENST00000520850 NSMFQ6X4W1 530 aa18.89■□□□□ 0.61
TNPO1-212ENST00000520850 TEX2Q8IWB9 1127 aa18.89■□□□□ 0.61
TNPO1-212ENST00000520850 ALDH8A1Q9H2A2 487 aaPredicted RBP18.89■□□□□ 0.61
TNPO1-212ENST00000520850 CNPY2Q9Y2B0 182 aa18.89■□□□□ 0.61
TNPO1-212ENST00000520850 CYP46A1Q9Y6A2 500 aa18.89■□□□□ 0.61
TNPO1-212ENST00000520850 CCDC196A0A1B0GTZ2 297 aa18.88■□□□□ 0.61
TNPO1-212ENST00000520850 B4DLN1 442 aa18.88■□□□□ 0.61
TNPO1-212ENST00000520850 ZBTB43O43298 467 aa18.88■□□□□ 0.61
TNPO1-212ENST00000520850 CASTP20810 708 aaKnown RBP18.88■□□□□ 0.61
TNPO1-212ENST00000520850 MRPL12P52815 198 aaKnown RBP18.88■□□□□ 0.61
TNPO1-212ENST00000520850 RPS6P62753 249 aaKnown RBP18.88■□□□□ 0.61
TNPO1-212ENST00000520850 CNTN2Q02246 1040 aa18.88■□□□□ 0.61
TNPO1-212ENST00000520850 Q6ZUG5 572 aa18.88■□□□□ 0.61
TNPO1-212ENST00000520850 SRBD1Q8N5C6 995 aaKnown RBP18.88■□□□□ 0.61
TNPO1-212ENST00000520850 RRP36Q96EU6 259 aaKnown RBP18.88■□□□□ 0.61
TNPO1-212ENST00000520850 PIGSQ96S52 555 aa18.88■□□□□ 0.61
TNPO1-212ENST00000520850 MYL10Q9BUA6 226 aa18.88■□□□□ 0.61
TNPO1-212ENST00000520850 BRPF3Q9ULD4 1205 aa18.88■□□□□ 0.61
TNPO1-212ENST00000520850 PCDHA1Q9Y5I3 950 aa18.88■□□□□ 0.61
TNPO1-212ENST00000520850 MKI67P46013 3256 aaKnown RBP18.88■□□□□ 0.61
TNPO1-212ENST00000520850 PPP1R11O60927 126 aaPredicted RBP18.87■□□□□ 0.61
TNPO1-212ENST00000520850 FGD1P98174 961 aa18.87■□□□□ 0.61
TNPO1-212ENST00000520850 NID2Q14112 1375 aa18.87■□□□□ 0.61
TNPO1-212ENST00000520850 USH1GQ495M9 461 aa18.87■□□□□ 0.61
TNPO1-212ENST00000520850 TMTC3Q6ZXV5 915 aa18.87■□□□□ 0.61
TNPO1-212ENST00000520850 ARMCX2Q7L311 632 aa18.87■□□□□ 0.61
TNPO1-212ENST00000520850 CCDC144CPQ8IYA2 1237 aa18.87■□□□□ 0.61
TNPO1-212ENST00000520850 MPHOSPH6Q99547 160 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms