RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 NEK8Q86SG6 692 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 RTKN2Q8IZC4 609 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 REXO1Q8N1G1 1221 aaKnown RBP11.25□□□□□ -0.61
SPARC-202ENST00000520687 PDILTQ8N807 584 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 DCAF4Q8WV16 495 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 C7orf43Q8WVR3 580 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 GPKOWQ92917 476 aaPredicted RBP eCLIP11.25□□□□□ -0.61
SPARC-202ENST00000520687 CCDC47Q96A33 483 aaKnown RBP11.25□□□□□ -0.61
SPARC-202ENST00000520687 PAXBP1Q9Y5B6 917 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 PSME4Q14997 1843 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 USP17L5A8MUK1 530 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 ECE2O60344 883 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 AKR1B1P15121 316 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 CDK11BP21127 795 aaKnown RBP11.24□□□□□ -0.61
SPARC-202ENST00000520687 BMP6P22004 513 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 MMP14P50281 582 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 ADCY7P51828 1080 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 MRPL12P52815 198 aaKnown RBP11.24□□□□□ -0.61
SPARC-202ENST00000520687 SPAG1Q07617 926 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 KCNB1Q14721 858 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 CFAP100Q494V2 611 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 PDXDC2PQ6P474 469 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 PPP4R3CPQ6ZMV5 832 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 FILIP1Q7Z7B0 1213 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 VSTM4Q8IW00 320 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 MYRIPQ8NFW9 859 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 TRIM34Q9BYJ4 488 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 RAB34Q9BZG1 259 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 HSD3B7Q9H2F3 369 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 DDX4Q9NQI0 724 aaKnown RBP11.24□□□□□ -0.61
SPARC-202ENST00000520687 FANCLQ9NW38 375 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 HACL1Q9UJ83 578 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 ZNF646O15015 1829 aaPredicted RBP11.24□□□□□ -0.61
SPARC-202ENST00000520687 PITPNM2Q9BZ72 1349 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 LTBP3Q9NS15 1303 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 A0A087WWV3 80 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.24□□□□□ -0.61
SPARC-202ENST00000520687 F8W031 263 aaPredicted RBP11.24□□□□□ -0.61
SPARC-202ENST00000520687 OR52Z1P0C646 297 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 GTF2F1P35269 517 aaKnown RBP eCLIP11.24□□□□□ -0.61
SPARC-202ENST00000520687 STAT6P42226 847 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 AMPD3Q01432 767 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 FILIP1LQ4L180 1135 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 RRAGBQ5VZM2 374 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 MAP1SQ66K74 1059 aaPredicted RBP11.24□□□□□ -0.61
SPARC-202ENST00000520687 ISM2Q6H9L7 571 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 TYW1BQ6NUM6 668 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 TMC6Q7Z403 805 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 MTERF4Q7Z6M4 381 aaKnown RBP11.24□□□□□ -0.61
SPARC-202ENST00000520687 FCHSD1Q86WN1 690 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 ANKRD20A12PQ8NF67 263 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 MTMR8Q96EF0 704 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 PIGSQ96S52 555 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 LRRC27Q9C0I9 530 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 RIC8AQ9NPQ8 531 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 DISC1Q9NRI5 854 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 NFE2L3Q9Y4A8 694 aa11.24□□□□□ -0.61
SPARC-202ENST00000520687 MYH1P12882 1939 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 A0A087X0B3 334 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 UQCRHLA0A096LP55 91 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 UQCRHP07919 91 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 GOLGA8HP0CJ92 632 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 GCFC2P16383 781 aaKnown RBP11.23□□□□□ -0.61
SPARC-202ENST00000520687 EPHX2P34913 555 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 AFMP43652 599 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 SCNN1DP51172 638 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 CCZ1BP86790 482 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 CCZ1P86791 482 aaPredicted RBP11.23□□□□□ -0.61
SPARC-202ENST00000520687 LRMPQ12912 555 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 CUL4BQ13620 913 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 PDIA5Q14554 519 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 IL17AQ16552 155 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 INF2Q27J81 1249 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 NOM1Q5C9Z4 860 aaKnown RBP11.23□□□□□ -0.61
SPARC-202ENST00000520687 ZNF658Q5TYW1 1059 aaPredicted RBP11.23□□□□□ -0.61
SPARC-202ENST00000520687 TATDN1Q6P1N9 297 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 TMEM179Q6ZVK1 233 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 PSMD1Q99460 953 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 RWDD2AQ9UIY3 292 aa11.23□□□□□ -0.61
SPARC-202ENST00000520687 ATRNL1Q5VV63 1379 aa11.22□□□□□ -0.61
SPARC-202ENST00000520687 WNT7AO00755 349 aa11.22□□□□□ -0.61
SPARC-202ENST00000520687 ZBTB5O15062 677 aa11.22□□□□□ -0.61
SPARC-202ENST00000520687 AOC2O75106 756 aa11.22□□□□□ -0.61
SPARC-202ENST00000520687 STIM1Q13586 685 aa11.22□□□□□ -0.61
SPARC-202ENST00000520687 TPD52L1Q16890 204 aaPredicted RBP11.22□□□□□ -0.61
SPARC-202ENST00000520687 TMEM266Q2M3C6 531 aa11.22□□□□□ -0.61
SPARC-202ENST00000520687 CERKLQ49MI3 558 aaPredicted RBP11.22□□□□□ -0.61
SPARC-202ENST00000520687 PPP4R3AQ6IN85 833 aa11.22□□□□□ -0.61
SPARC-202ENST00000520687 NOC3LQ8WTT2 800 aaKnown RBP11.22□□□□□ -0.61
SPARC-202ENST00000520687 DBNDD1Q9H9R9 158 aa11.22□□□□□ -0.61
SPARC-202ENST00000520687 TMOD2Q9NZR1 351 aa11.22□□□□□ -0.61
SPARC-202ENST00000520687 TLL2Q9Y6L7 1015 aa11.22□□□□□ -0.61
SPARC-202ENST00000520687 MYH8P13535 1937 aa11.22□□□□□ -0.61
SPARC-202ENST00000520687 LRRC10BA6NIK2 292 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 PPP1R3GB7ZBB8 358 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 RPN1P04843 607 aaKnown RBP11.21□□□□□ -0.61
SPARC-202ENST00000520687 ATP1A3P13637 1013 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 FXR2P51116 673 aaKnown RBP eCLIP11.21□□□□□ -0.61
SPARC-202ENST00000520687 CCDC93Q567U6 631 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms