RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 CERS5Q8N5B7 392 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 MIGA1Q8NAN2 632 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 TTC14Q96N46 770 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 PSMD1Q99460 953 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 RIOK1Q9BRS2 568 aaKnown RBP9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 KCNQ5Q9NR82 932 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 COL4A5P29400 1685 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 SBF1O95248 1867 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 M0R082 166 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 CPA1P15085 419 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 ZKSCAN1P17029 563 aaPredicted RBP9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 RFX1P22670 979 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 DYNLL1P63167 89 aaKnown RBP9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 AOC3Q16853 763 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 DALRD3Q5D0E6 543 aaKnown RBP9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 MFSD14BQ5SR56 506 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 STOX1Q6ZVD7 989 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 RAB44Q7Z6P3 723 aaPredicted RBP9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 IFNL3Q8IZI9 196 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 SUPT20HQ8NEM7 779 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 ZNF417Q8TAU3 575 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 TBC1D22AQ8WUA7 517 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 BHMTQ93088 406 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 VTI1AQ96AJ9 217 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 JAKMIP1Q96N16 626 aaKnown RBP9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 ZNF587Q96SQ5 575 aaPredicted RBP9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 UPF3BQ9BZI7 483 aaKnown RBP9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 DBNDD1Q9H9R9 158 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 EPB41L4AQ9HCS5 686 aaPredicted RBP9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 C11orf16Q9NQ32 467 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 DMGDHQ9UI17 866 aaKnown RBP9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 CTNNA3Q9UI47 895 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 DICER1Q9UPY3 1922 aaKnown RBP9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 LAMB1P07942 1786 aa9.32□□□□□ -0.92
CTHRC1-203ENST00000520337 ZMYM6O95789 1325 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 YDJCA8MPS7 323 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 C1QTNF9BB2RNN3 333 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 ECE2O60344 883 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 GNAT2P19087 354 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 CASTP20810 708 aaKnown RBP9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 DACT2Q5SW24 774 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 SOGA3Q5TF21 947 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 DZIP1Q86YF9 867 aaKnown RBP9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 MICALL1Q8N3F8 863 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 NLGN2Q8NFZ4 835 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 MYO19Q96H55 970 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 MXD3Q9BW11 206 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 KRTAP9-2Q9BYQ4 174 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 SPON1Q9HCB6 807 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 PPP1R1BQ9UD71 204 aaPredicted RBP9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 SUGT1Q9Y2Z0 365 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 STARD13Q9Y3M8 1113 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 SLC4A4Q9Y6R1 1079 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 NAV1Q8NEY1 1877 aa9.31□□□□□ -0.92
CTHRC1-203ENST00000520337 GPR75-ASB3A0A0A6YYF3 556 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 E7EWF7 191 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 K7ELQ4 463 aaPredicted RBP9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 PPIP5K2O43314 1243 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 APPP05067 770 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 LDHCP07864 332 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 PSMA5P28066 241 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 HAND2P61296 217 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 FKBP1AP62942 108 aaKnown RBP9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 GSTO1P78417 241 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 KRT32Q14532 448 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 SWI5Q1ZZU3 235 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 PRRT3Q5FWE3 981 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 STRIP1Q5VSL9 837 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 RUFY3Q7L099 469 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 CD163Q86VB7 1156 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 HSCBQ8IWL3 235 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 VPS33BQ9H267 617 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 ZNF277Q9NRM2 450 aaPredicted RBP9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 AATFQ9NY61 560 aaKnown RBP eCLIP9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 BCS1LQ9Y276 419 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 TIAM2Q8IVF5 1701 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 MROH7-TTC4A0A0A0MT08 1334 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 GAKO14976 1311 aa9.3□□□□□ -0.92
CTHRC1-203ENST00000520337 DDX60LQ5H9U9 1706 aaKnown RBP9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 LGR5O75473 907 aa9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 ALBP02768 609 aa9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 RPS6KB1P23443 525 aa9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 EXOSC10Q01780 885 aaKnown RBP9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 CCINQ13939 588 aa9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 ELOAQ14241 798 aaKnown RBP9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 IMMTQ16891 758 aaKnown RBP9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 CCDC82Q8N4S0 544 aa9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 SDR42E1Q8WUS8 393 aa9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 PNMA5Q96PV4 448 aa9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 NEK1Q96PY6 1258 aa9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 GSX2Q9BZM3 304 aa9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 UBE2OQ9C0C9 1292 aaKnown RBP9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 ALDH8A1Q9H2A2 487 aaPredicted RBP9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 NOVA2Q9UNW9 492 aaKnown RBP9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 CYP46A1Q9Y6A2 500 aa9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 TACC3Q9Y6A5 838 aa9.29□□□□□ -0.92
CTHRC1-203ENST00000520337 SMIM22K7EJ46 135 aa9.28□□□□□ -0.92
CTHRC1-203ENST00000520337 NFKBIEO00221 500 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms