RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 ALAS1P13196 640 aa20.51■□□□□ 0.87
SDC2-205ENST00000520233 NAPAP54920 295 aa20.51■□□□□ 0.87
SDC2-205ENST00000520233 CCNA1P78396 465 aa20.51■□□□□ 0.87
SDC2-205ENST00000520233 CCDC148Q8NFR7 591 aa20.51■□□□□ 0.87
SDC2-205ENST00000520233 CCDC12Q8WUD4 166 aaPredicted RBP20.51■□□□□ 0.87
SDC2-205ENST00000520233 CWC22Q9HCG8 908 aaKnown RBP20.51■□□□□ 0.87
SDC2-205ENST00000520233 SAGE1Q9NXZ1 904 aa20.51■□□□□ 0.87
SDC2-205ENST00000520233 RIPK3Q9Y572 518 aa20.51■□□□□ 0.87
SDC2-205ENST00000520233 TRPA1O75762 1119 aa20.5■□□□□ 0.87
SDC2-205ENST00000520233 TYW1BQ6NUM6 668 aa20.5■□□□□ 0.87
SDC2-205ENST00000520233 SHCBP1Q8NEM2 672 aa20.5■□□□□ 0.87
SDC2-205ENST00000520233 CHST13Q8NET6 341 aa20.5■□□□□ 0.87
SDC2-205ENST00000520233 TRERF1Q96PN7 1200 aa20.5■□□□□ 0.87
SDC2-205ENST00000520233 VPS54Q9P1Q0 977 aa20.5■□□□□ 0.87
SDC2-205ENST00000520233 ESYT2A0FGR8 921 aa20.49■□□□□ 0.87
SDC2-205ENST00000520233 TBC1D8O95759 1140 aa20.49■□□□□ 0.87
SDC2-205ENST00000520233 TAL1P17542 331 aaPredicted RBP20.49■□□□□ 0.87
SDC2-205ENST00000520233 PDCP20941 246 aa20.49■□□□□ 0.87
SDC2-205ENST00000520233 RGS22Q8NE09 1264 aa20.49■□□□□ 0.87
SDC2-205ENST00000520233 SHISA4Q96DD7 197 aa20.49■□□□□ 0.87
SDC2-205ENST00000520233 C8orf76Q96K31 380 aa20.49■□□□□ 0.87
SDC2-205ENST00000520233 IPO9Q96P70 1041 aaKnown RBP20.49■□□□□ 0.87
SDC2-205ENST00000520233 R3HDMLQ9H3Y0 253 aa20.49■□□□□ 0.87
SDC2-205ENST00000520233 RNF146Q9NTX7 359 aa20.49■□□□□ 0.87
SDC2-205ENST00000520233 FBXO40Q9UH90 709 aa20.49■□□□□ 0.87
SDC2-205ENST00000520233 MYH6P13533 1939 aa20.49■□□□□ 0.87
SDC2-205ENST00000520233 ERCC3P19447 782 aa20.48■□□□□ 0.87
SDC2-205ENST00000520233 TRIM29Q14134 588 aa20.48■□□□□ 0.87
SDC2-205ENST00000520233 MUM1L1Q5H9M0 696 aa20.48■□□□□ 0.87
SDC2-205ENST00000520233 LARP1BQ659C4 914 aaKnown RBP20.48■□□□□ 0.87
SDC2-205ENST00000520233 NCAPG2Q86XI2 1143 aa20.48■□□□□ 0.87
SDC2-205ENST00000520233 CLEC4DQ8WXI8 215 aa20.48■□□□□ 0.87
SDC2-205ENST00000520233 MAF1Q9H063 256 aa20.48■□□□□ 0.87
SDC2-205ENST00000520233 ZMYND12Q9H0C1 365 aa20.48■□□□□ 0.87
SDC2-205ENST00000520233 MROH8Q9H579 483 aa20.48■□□□□ 0.87
SDC2-205ENST00000520233 ACAD9Q9H845 621 aa20.48■□□□□ 0.87
SDC2-205ENST00000520233 HOMER2Q9NSB8 354 aa20.48■□□□□ 0.87
SDC2-205ENST00000520233 SMCO2A6NFE2 343 aa20.47■□□□□ 0.87
SDC2-205ENST00000520233 NLRP5P59047 1200 aa20.47■□□□□ 0.87
SDC2-205ENST00000520233 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.47■□□□□ 0.87
SDC2-205ENST00000520233 MCF2L2Q86YR7 1114 aa20.47■□□□□ 0.87
SDC2-205ENST00000520233 TEX2Q8IWB9 1127 aa20.47■□□□□ 0.87
SDC2-205ENST00000520233 FBXO18Q8NFZ0 1043 aa20.47■□□□□ 0.87
SDC2-205ENST00000520233 BEGAINQ9BUH8 593 aa20.47■□□□□ 0.87
SDC2-205ENST00000520233 PHF20Q9BVI0 1012 aa20.47■□□□□ 0.87
SDC2-205ENST00000520233 GLT8D2Q9H1C3 349 aa20.47■□□□□ 0.87
SDC2-205ENST00000520233 PORCNQ9H237 461 aa20.47■□□□□ 0.87
SDC2-205ENST00000520233 C6orf50Q9HD87 102 aa20.47■□□□□ 0.87
SDC2-205ENST00000520233 GJB4Q9NTQ9 266 aa20.47■□□□□ 0.87
SDC2-205ENST00000520233 NFIBO00712 420 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 OPLAHO14841 1288 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 CALML3P27482 149 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 GNA11P29992 359 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 MAPK4P31152 587 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 FOSBP53539 338 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 KRT40Q6A162 431 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 GALNT17Q6IS24 598 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 SAMD3Q8N6K7 520 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 PSTPIP2Q9H939 334 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 EFCC1Q9HA90 598 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 RIC8AQ9NPQ8 531 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 WBP1LQ9NX94 342 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 KCNJ14Q9UNX9 436 aa20.46■□□□□ 0.87
SDC2-205ENST00000520233 PDIA4P13667 645 aaKnown RBP20.45■□□□□ 0.86
SDC2-205ENST00000520233 SYT1P21579 422 aa20.45■□□□□ 0.86
SDC2-205ENST00000520233 ADCY7P51828 1080 aa20.45■□□□□ 0.86
SDC2-205ENST00000520233 MRPL12P52815 198 aaKnown RBP20.45■□□□□ 0.86
SDC2-205ENST00000520233 GHRHRQ02643 423 aa20.45■□□□□ 0.86
SDC2-205ENST00000520233 CCAR1Q8IX12 1150 aaKnown RBP20.45■□□□□ 0.86
SDC2-205ENST00000520233 DAGLBQ8NCG7 672 aa20.45■□□□□ 0.86
SDC2-205ENST00000520233 CUL5Q93034 780 aa20.45■□□□□ 0.86
SDC2-205ENST00000520233 MAP3K20Q9NYL2 800 aaKnown RBP20.45■□□□□ 0.86
SDC2-205ENST00000520233 MMP1P03956 469 aa20.44■□□□□ 0.86
SDC2-205ENST00000520233 GUCY1B3Q02153 619 aa20.44■□□□□ 0.86
SDC2-205ENST00000520233 NOM1Q5C9Z4 860 aaKnown RBP20.44■□□□□ 0.86
SDC2-205ENST00000520233 BICD2Q8TD16 824 aa20.44■□□□□ 0.86
SDC2-205ENST00000520233 PCDHA4Q9UN74 947 aa20.44■□□□□ 0.86
SDC2-205ENST00000520233 H3BQV1 296 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 GCOM1H8Y6P7 765 aaPredicted RBP20.43■□□□□ 0.86
SDC2-205ENST00000520233 PIK3CDO00329 1044 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 MEIS2O14770 477 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 CFBP00751 764 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 POLR2MP0CAP2 368 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 HSD17B4P51659 736 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 SP3Q02447 781 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 NPY5RQ15761 445 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 IFFO2Q5TF58 517 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 WDR78Q5VTH9 848 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 NSMFQ6X4W1 530 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 BLIDQ8IZY5 108 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 JMYQ8N9B5 988 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 TBC1D5Q92609 795 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 BRMS1Q9HCU9 246 aa20.43■□□□□ 0.86
SDC2-205ENST00000520233 GPR25O00155 361 aa20.42■□□□□ 0.86
SDC2-205ENST00000520233 STRNO43815 780 aa20.42■□□□□ 0.86
SDC2-205ENST00000520233 FCER1AP12319 257 aa20.42■□□□□ 0.86
SDC2-205ENST00000520233 KCTD2Q14681 263 aa20.42■□□□□ 0.86
SDC2-205ENST00000520233 SAFBQ15424 915 aaKnown RBP eCLIP20.42■□□□□ 0.86
SDC2-205ENST00000520233 RNF207Q6ZRF8 634 aa20.42■□□□□ 0.86
SDC2-205ENST00000520233 GPR142Q7Z601 462 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms