RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 SEZ6LQ9BYH1 1024 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 KATNBL1Q9H079 304 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 UPF3AQ9H1J1 476 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 ABHD16BQ9H3Z7 469 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 CNPY2Q9Y2B0 182 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 COL6A3P12111 3177 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 ZNF536O15090 1300 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 ELP1O95163 1332 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 TMEM265A0A087WTH1 108 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 LOC102724159A0A0B4J2E5 919 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 A0A1W2PQ45 241 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 A0A1W2PQY0 241 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 RIOK3O14730 519 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 ORC4O43929 436 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 APPP05067 770 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 CLTBP09497 229 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 MX1P20591 662 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 TDO2P48775 406 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 GJA9P57773 515 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 TFAP4Q01664 338 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 PPARAQ07869 468 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 HDAC1Q13547 482 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 ACVR2BQ13705 512 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 PWP2Q15269 919 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 SHHQ15465 462 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 ANO1Q5XXA6 986 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 TSHZ3Q63HK5 1081 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 SLFN13Q68D06 897 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 BTNL9Q6UXG8 535 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 Q7L0L9 218 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 SH3RF1Q7Z6J0 888 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 FAM133AQ8N9E0 248 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 IL27Q8NEV9 243 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 NUP133Q8WUM0 1156 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 BADQ92934 168 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 EVI5LQ96CN4 794 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 SEC62Q99442 399 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 IL17RBQ9NRM6 502 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 HELLSQ9NRZ9 838 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 TCP11L1Q9NUJ3 509 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 ATP11BQ9Y2G3 1177 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 Q9Y3F1 56 aa6.71□□□□□ -1.34
CTNNA1-219ENST00000520158 DLL1O00548 723 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 CLGNO14967 610 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 CTAGE5O15320 804 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 PRDM1O75626 825 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 PGK1P00558 417 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 TSPY3P0CV98 308 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 TSPY8P0CW00 308 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 PYGBP11216 843 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 ITGB8P26012 769 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 NT5C2P49902 561 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 STAT2P52630 851 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 ANAPC15P60006 121 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 FAM193AP78312 1265 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 FAAP100Q0VG06 881 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 KCNA10Q16322 511 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 CCDC144BQ3MJ40 725 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 ANKRD35Q8N283 1001 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 SLC43A3Q8NBI5 491 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 PCSK9Q8NBP7 692 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 SPRYD3Q8NCJ5 442 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 OTUD7AQ8TE49 926 aaPredicted RBP6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 MORC4Q8TE76 937 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 FERMT2Q96AC1 680 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 GUCD1Q96NT3 240 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 FSD1Q9BTV5 496 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 MAF1Q9H063 256 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 NAPBQ9H115 298 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 SEMA6BQ9H3T3 888 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 ACAD9Q9H845 621 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 RAVER2Q9HCJ3 691 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 TBX21Q9UL17 535 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 ZMYM6O95789 1325 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 MROH7Q68CQ1 1323 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 SYNRGQ9UMZ2 1314 aa6.7□□□□□ -1.34
CTNNA1-219ENST00000520158 MCM3APO60318 1980 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 SOWAHBA6NEL2 793 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 ASB14A6NK59 587 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 DCDC2CA8MYV0 355 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 TMEM232C9JQI7 657 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 ADCY6O43306 1168 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 RRP9O43818 475 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 TIMP1P01033 207 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 CD4P01730 458 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 PCP11498 1178 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 SLC1A4P43007 532 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 PDE1AP54750 535 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 C9orf50Q5SZB4 431 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 RASIP1Q5U651 963 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 IQSEC1Q6DN90 963 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 ARMCX2Q7L311 632 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 CCDC144CPQ8IYA2 1237 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 CPXCR1Q8N123 301 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 DCAF4Q8WV16 495 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 KIFC2Q96AC6 838 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 GLT1D1Q96MS3 346 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 TTC14Q96N46 770 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms