RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 HIPK3Q9H422 1215 aa18.65■□□□□ 0.58
CSGALNACT1-208ENST00000520003 MSRAQ9UJ68 235 aa18.65■□□□□ 0.58
CSGALNACT1-208ENST00000520003 YBX2Q9Y2T7 364 aaKnown RBP18.65■□□□□ 0.58
CSGALNACT1-208ENST00000520003 SALL3Q9BXA9 1300 aa18.65■□□□□ 0.58
CSGALNACT1-208ENST00000520003 LRRC37A2A6NM11 1700 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 ASB14A6NK59 587 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 TMEM232C9JQI7 657 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 PLA2G6O60733 806 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 FGBP02675 491 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 APPP05067 770 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 ITGA7Q13683 1181 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 FSCN1Q16658 493 aaKnown RBP18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 LRRFIP1Q32MZ4 808 aaKnown RBP18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 TKFCQ3LXA3 575 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 ZMYM1Q5SVZ6 1142 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 TLK2Q86UE8 772 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 FAM160B2Q86V87 743 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 PPM1EQ8WY54 764 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 AGBL1Q96MI9 1066 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 NOC4LQ9BVI4 516 aaKnown RBP18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 RNF146Q9NTX7 359 aa18.64■□□□□ 0.57
CSGALNACT1-208ENST00000520003 ERC2O15083 957 aa18.63■□□□□ 0.57
CSGALNACT1-208ENST00000520003 FOXP2O15409 715 aa18.63■□□□□ 0.57
CSGALNACT1-208ENST00000520003 SMPD1P17405 629 aa18.63■□□□□ 0.57
CSGALNACT1-208ENST00000520003 COL9A1P20849 921 aa18.63■□□□□ 0.57
CSGALNACT1-208ENST00000520003 PTGS1P23219 599 aa18.63■□□□□ 0.57
CSGALNACT1-208ENST00000520003 TAPT1Q6NXT6 567 aa18.63■□□□□ 0.57
CSGALNACT1-208ENST00000520003 CHURC1Q8WUH1 139 aa18.63■□□□□ 0.57
CSGALNACT1-208ENST00000520003 STAG1Q8WVM7 1258 aa18.63■□□□□ 0.57
CSGALNACT1-208ENST00000520003 WNT8AQ9H1J5 351 aa18.63■□□□□ 0.57
CSGALNACT1-208ENST00000520003 MTIF3Q9H2K0 278 aaKnown RBP18.63■□□□□ 0.57
CSGALNACT1-208ENST00000520003 NKX2-4Q9H2Z4 354 aa18.63■□□□□ 0.57
CSGALNACT1-208ENST00000520003 Q9Y3F1 56 aa18.63■□□□□ 0.57
CSGALNACT1-208ENST00000520003 B4GALT4O60513 344 aa18.62■□□□□ 0.57
CSGALNACT1-208ENST00000520003 TSPY3P0CV98 308 aa18.62■□□□□ 0.57
CSGALNACT1-208ENST00000520003 TSPY8P0CW00 308 aa18.62■□□□□ 0.57
CSGALNACT1-208ENST00000520003 MRPS5P82675 430 aaKnown RBP18.62■□□□□ 0.57
CSGALNACT1-208ENST00000520003 PPARAQ07869 468 aa18.62■□□□□ 0.57
CSGALNACT1-208ENST00000520003 IQSEC1Q6DN90 963 aa18.62■□□□□ 0.57
CSGALNACT1-208ENST00000520003 ADAMTS19Q8TE59 1207 aa18.62■□□□□ 0.57
CSGALNACT1-208ENST00000520003 MORC4Q8TE76 937 aa18.62■□□□□ 0.57
CSGALNACT1-208ENST00000520003 FSD1Q9BTV5 496 aa18.62■□□□□ 0.57
CSGALNACT1-208ENST00000520003 TRPV6Q9H1D0 765 aa18.62■□□□□ 0.57
CSGALNACT1-208ENST00000520003 DDX49Q9Y6V7 483 aaKnown RBP18.62■□□□□ 0.57
CSGALNACT1-208ENST00000520003 TFAP4Q01664 338 aa18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 PDE4BQ07343 736 aa18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 TMEM63BQ5T3F8 832 aa18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 NOL8Q76FK4 1167 aaKnown RBP18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 OTOP2Q7RTS6 562 aa18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 TRERF1Q96PN7 1200 aa18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 NACAP1Q9BZK3 213 aa18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 AP5M1Q9H0R1 490 aa18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 NAPBQ9H115 298 aa18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 SLC28A3Q9HAS3 691 aa18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 PDGFCQ9NRA1 345 aa18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 CYP39A1Q9NYL5 469 aa18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.61■□□□□ 0.57
CSGALNACT1-208ENST00000520003 DYNC1LI2O43237 492 aaPredicted RBP18.6■□□□□ 0.57
CSGALNACT1-208ENST00000520003 MX1P20591 662 aa18.6■□□□□ 0.57
CSGALNACT1-208ENST00000520003 SLC1A4P43007 532 aa18.6■□□□□ 0.57
CSGALNACT1-208ENST00000520003 CCL23P55773 120 aa18.6■□□□□ 0.57
CSGALNACT1-208ENST00000520003 MUM1L1Q5H9M0 696 aa18.6■□□□□ 0.57
CSGALNACT1-208ENST00000520003 MYO9BQ13459 2157 aa18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 XIRP2A4UGR9 3374 aa18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 LCTP09848 1927 aa18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 ZEB2O60315 1214 aa18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 ALAS1P13196 640 aa18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 IGFBP4P22692 258 aa18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 MCCP23508 829 aa18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 NOVP48745 357 aa18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 PSMC6P62333 389 aa18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 CCDC85BQ15834 202 aaPredicted RBP18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 RCSD1Q6JBY9 416 aa18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 FBXO16Q8IX29 292 aaPredicted RBP18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 VTA1Q9NP79 307 aa18.59■□□□□ 0.57
CSGALNACT1-208ENST00000520003 REV3LO60673 3130 aa18.58■□□□□ 0.56
CSGALNACT1-208ENST00000520003 RABGGTBP53611 331 aa18.58■□□□□ 0.56
CSGALNACT1-208ENST00000520003 KCTD1Q719H9 257 aa18.58■□□□□ 0.56
CSGALNACT1-208ENST00000520003 RPUSD2Q8IZ73 545 aaKnown RBP18.58■□□□□ 0.56
CSGALNACT1-208ENST00000520003 UHRF1Q96T88 793 aaPredicted RBP18.58■□□□□ 0.56
CSGALNACT1-208ENST00000520003 ALDH8A1Q9H2A2 487 aaPredicted RBP18.58■□□□□ 0.56
CSGALNACT1-208ENST00000520003 IL17RBQ9NRM6 502 aa18.58■□□□□ 0.56
CSGALNACT1-208ENST00000520003 PRR12Q9ULL5 1215 aa18.58■□□□□ 0.56
CSGALNACT1-208ENST00000520003 PCDHA11Q9Y5I1 949 aa18.58■□□□□ 0.56
CSGALNACT1-208ENST00000520003 SLC4A7Q9Y6M7 1214 aa18.58■□□□□ 0.56
CSGALNACT1-208ENST00000520003 GBF1Q92538 1859 aa18.58■□□□□ 0.56
CSGALNACT1-208ENST00000520003 NCOR1O75376 2440 aa18.57■□□□□ 0.56
CSGALNACT1-208ENST00000520003 SLC3A2P08195 630 aaKnown RBP18.57■□□□□ 0.56
CSGALNACT1-208ENST00000520003 IKQ13123 557 aaPredicted RBP18.57■□□□□ 0.56
CSGALNACT1-208ENST00000520003 PPP4R3BQ5MIZ7 849 aa18.57■□□□□ 0.56
CSGALNACT1-208ENST00000520003 EEPD1Q7L9B9 569 aa18.57■□□□□ 0.56
CSGALNACT1-208ENST00000520003 RASGRP2Q7LDG7 609 aa18.57■□□□□ 0.56
CSGALNACT1-208ENST00000520003 PURBQ96QR8 312 aaKnown RBP18.57■□□□□ 0.56
CSGALNACT1-208ENST00000520003 PFKMP08237 780 aa18.56■□□□□ 0.56
CSGALNACT1-208ENST00000520003 MYOGP15173 224 aa18.56■□□□□ 0.56
CSGALNACT1-208ENST00000520003 POU3F3P20264 500 aaPredicted RBP18.56■□□□□ 0.56
CSGALNACT1-208ENST00000520003 RRP1P56182 461 aaKnown RBP18.56■□□□□ 0.56
CSGALNACT1-208ENST00000520003 SNAP25P60880 206 aa18.56■□□□□ 0.56
CSGALNACT1-208ENST00000520003 CTDSPL2Q05D32 466 aa18.56■□□□□ 0.56
CSGALNACT1-208ENST00000520003 DUSP28Q4G0W2 176 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms