RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 DDX11Q96FC9 970 aa13.76□□□□□ -0.21
HPS4-218ENST00000519774 PIGSQ96S52 555 aa13.76□□□□□ -0.21
HPS4-218ENST00000519774 UPF2Q9HAU5 1272 aaKnown RBP13.76□□□□□ -0.21
HPS4-218ENST00000519774 RBBP6Q7Z6E9 1792 aaKnown RBP13.76□□□□□ -0.21
HPS4-218ENST00000519774 ZBTB5O15062 677 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 CYTH3O43739 400 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 COBLO75128 1261 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 GNAQP50148 359 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 METAP2P50579 478 aaKnown RBP eCLIP13.75□□□□□ -0.21
HPS4-218ENST00000519774 TOB2Q14106 344 aaPredicted RBP13.75□□□□□ -0.21
HPS4-218ENST00000519774 TMTC3Q6ZXV5 915 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 FBXO11Q86XK2 927 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 CCDC82Q8N4S0 544 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 SRBD1Q8N5C6 995 aaKnown RBP13.75□□□□□ -0.21
HPS4-218ENST00000519774 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
HPS4-218ENST00000519774 PXYLP1Q8TE99 480 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 TRIB2Q92519 343 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 LZTS2Q9BRK4 669 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
HPS4-218ENST00000519774 SPZ1Q9BXG8 430 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 AGXT2Q9BYV1 514 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 C22orf23Q9BZE7 217 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 RIOX1Q9H6W3 641 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 RBM28Q9NW13 759 aaKnown RBP13.75□□□□□ -0.21
HPS4-218ENST00000519774 SLC5A4Q9NY91 659 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 PNMA2Q9UL42 364 aa13.75□□□□□ -0.21
HPS4-218ENST00000519774 CCDC85CA6NKD9 419 aa13.74□□□□□ -0.21
HPS4-218ENST00000519774 NFIBO00712 420 aa13.74□□□□□ -0.21
HPS4-218ENST00000519774 HMGCRP04035 888 aa13.74□□□□□ -0.21
HPS4-218ENST00000519774 INHAP05111 366 aa13.74□□□□□ -0.21
HPS4-218ENST00000519774 XRCC5P13010 732 aaKnown RBP13.74□□□□□ -0.21
HPS4-218ENST00000519774 UBXN2AP68543 259 aa13.74□□□□□ -0.21
HPS4-218ENST00000519774 TRIM32Q13049 653 aa13.74□□□□□ -0.21
HPS4-218ENST00000519774 NOL8Q76FK4 1167 aaKnown RBP13.74□□□□□ -0.21
HPS4-218ENST00000519774 FBXL16Q8N461 479 aa13.74□□□□□ -0.21
HPS4-218ENST00000519774 ARMC5Q96C12 935 aa13.74□□□□□ -0.21
HPS4-218ENST00000519774 MTMR8Q96EF0 704 aa13.74□□□□□ -0.21
HPS4-218ENST00000519774 RRP36Q96EU6 259 aaKnown RBP13.74□□□□□ -0.21
HPS4-218ENST00000519774 AMNQ9BXJ7 453 aa13.74□□□□□ -0.21
HPS4-218ENST00000519774 A1CFQ9NQ94 594 aaKnown RBP13.74□□□□□ -0.21
HPS4-218ENST00000519774 FLRT1Q9NZU1 646 aa13.74□□□□□ -0.21
HPS4-218ENST00000519774 PFASO15067 1338 aa13.73□□□□□ -0.21
HPS4-218ENST00000519774 ABCB11O95342 1321 aa13.73□□□□□ -0.21
HPS4-218ENST00000519774 PTPDC1A2A3K4 754 aa13.73□□□□□ -0.21
HPS4-218ENST00000519774 POTEB2H3BUK9 544 aa13.73□□□□□ -0.21
HPS4-218ENST00000519774 PPP1R11O60927 126 aaPredicted RBP13.73□□□□□ -0.21
HPS4-218ENST00000519774 HOXC6P09630 235 aa13.73□□□□□ -0.21
HPS4-218ENST00000519774 CDC27P30260 824 aa13.73□□□□□ -0.21
HPS4-218ENST00000519774 RCAN1P53805 252 aa13.73□□□□□ -0.21
HPS4-218ENST00000519774 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.73□□□□□ -0.21
HPS4-218ENST00000519774 TRMT44Q8IYL2 757 aaKnown RBP13.73□□□□□ -0.21
HPS4-218ENST00000519774 IL17RAQ96F46 866 aa13.73□□□□□ -0.21
HPS4-218ENST00000519774 ZNF333Q96JL9 665 aa13.73□□□□□ -0.21
HPS4-218ENST00000519774 SEC63Q9UGP8 760 aaKnown RBP13.73□□□□□ -0.21
HPS4-218ENST00000519774 CNTNAP5Q8WYK1 1306 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 PNMA6FA0A0J9YX94 578 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 hCG_1642624A0A1W2PR95 340 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 NEK4P51957 841 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 AK2P54819 239 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 CCT2P78371 535 aaKnown RBP13.72□□□□□ -0.21
HPS4-218ENST00000519774 CNTN2Q02246 1040 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 STK3Q13188 491 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 MTFR1Q15390 333 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 ZNF792Q3KQV3 632 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 MFSD14CQ5VZR4 134 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 SLC30A10Q6XR72 485 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 CLEC4DQ8WXI8 215 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 MAML3Q96JK9 1138 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 NCOA5Q9HCD5 579 aaKnown RBP13.72□□□□□ -0.21
HPS4-218ENST00000519774 MRPL11Q9Y3B7 192 aaKnown RBP13.72□□□□□ -0.21
HPS4-218ENST00000519774 PCDHA1Q9Y5I3 950 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 LCTP09848 1927 aa13.72□□□□□ -0.21
HPS4-218ENST00000519774 DNAJC25-GNG10A0A024R161 153 aa13.71□□□□□ -0.21
HPS4-218ENST00000519774 CCDC196A0A1B0GTZ2 297 aa13.71□□□□□ -0.21
HPS4-218ENST00000519774 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
HPS4-218ENST00000519774 CALML3P27482 149 aa13.71□□□□□ -0.21
HPS4-218ENST00000519774 SMARCA1P28370 1054 aa13.71□□□□□ -0.21
HPS4-218ENST00000519774 PDIA3P30101 505 aaKnown RBP13.71□□□□□ -0.21
HPS4-218ENST00000519774 CYP2C19P33261 490 aa13.71□□□□□ -0.21
HPS4-218ENST00000519774 ADD1P35611 737 aaKnown RBP13.71□□□□□ -0.21
HPS4-218ENST00000519774 RBM25P49756 843 aaKnown RBP13.71□□□□□ -0.21
HPS4-218ENST00000519774 BAATQ14032 418 aaPredicted RBP13.71□□□□□ -0.21
HPS4-218ENST00000519774 OLFML2BQ68BL8 750 aa13.71□□□□□ -0.21
HPS4-218ENST00000519774 RNF207Q6ZRF8 634 aa13.71□□□□□ -0.21
HPS4-218ENST00000519774 UNC93B1Q9H1C4 597 aa13.71□□□□□ -0.21
HPS4-218ENST00000519774 FAM217BQ9NTX9 383 aaPredicted RBP13.71□□□□□ -0.21
HPS4-218ENST00000519774 CYP39A1Q9NYL5 469 aa13.71□□□□□ -0.21
HPS4-218ENST00000519774 HTTP42858 3142 aa13.71□□□□□ -0.21
HPS4-218ENST00000519774 NID2Q14112 1375 aa13.71□□□□□ -0.22
HPS4-218ENST00000519774 CCL5P13501 91 aa13.7□□□□□ -0.22
HPS4-218ENST00000519774 SOX10P56693 466 aa13.7□□□□□ -0.22
HPS4-218ENST00000519774 EVCP57679 992 aa13.7□□□□□ -0.22
HPS4-218ENST00000519774 CACNB2Q08289 660 aaPredicted RBP13.7□□□□□ -0.22
HPS4-218ENST00000519774 TRAF1Q13077 416 aa13.7□□□□□ -0.22
HPS4-218ENST00000519774 PPP2R5BQ15173 497 aa13.7□□□□□ -0.22
HPS4-218ENST00000519774 ANKRD1Q15327 319 aa13.7□□□□□ -0.22
HPS4-218ENST00000519774 FAM133AQ8N9E0 248 aa13.7□□□□□ -0.22
HPS4-218ENST00000519774 GPKOWQ92917 476 aaPredicted RBP eCLIP13.7□□□□□ -0.22
HPS4-218ENST00000519774 FGD4Q96M96 766 aa13.7□□□□□ -0.22
HPS4-218ENST00000519774 PURBQ96QR8 312 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms