RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 ALAS1P13196 640 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 SMPD1P17405 629 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 OAZ1P54368 228 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 PSMC6P62333 389 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 NKX3-2P78367 333 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 TNFAIP2Q03169 654 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 PPARAQ07869 468 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 NOL8Q76FK4 1167 aaKnown RBP10.4□□□□□ -0.74
TRIM35-202ENST00000519219 TLK2Q86UE8 772 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 FBXO16Q8IX29 292 aaPredicted RBP10.4□□□□□ -0.74
TRIM35-202ENST00000519219 PCSK9Q8NBP7 692 aaKnown RBP10.4□□□□□ -0.74
TRIM35-202ENST00000519219 PPP1R13LQ8WUF5 828 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 TRPV6Q9H1D0 765 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 WNT8AQ9H1J5 351 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 NKX2-4Q9H2Z4 354 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 ACAD9Q9H845 621 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 IL17RBQ9NRM6 502 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 FBXO40Q9UH90 709 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.4□□□□□ -0.74
TRIM35-202ENST00000519219 YBX2Q9Y2T7 364 aaKnown RBP10.4□□□□□ -0.74
TRIM35-202ENST00000519219 PTPRSQ13332 1948 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 PRRC2BQ5JSZ5 2229 aaKnown RBP10.39□□□□□ -0.75
TRIM35-202ENST00000519219 SCN10AQ9Y5Y9 1956 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 MROH7Q68CQ1 1323 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 ZFYP08048 801 aaPredicted RBP10.39□□□□□ -0.75
TRIM35-202ENST00000519219 MYOGP15173 224 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 GNAT2P19087 354 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 STAT2P52630 851 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 CCL23P55773 120 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 IKQ13123 557 aaPredicted RBP10.39□□□□□ -0.75
TRIM35-202ENST00000519219 ZMYM1Q5SVZ6 1142 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 VPS53Q5VIR6 699 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 TTBK2Q6IQ55 1244 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 TAPT1Q6NXT6 567 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 SLC43A3Q8NBI5 491 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 STAG1Q8WVM7 1258 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 GMCL1Q96IK5 515 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 TRERF1Q96PN7 1200 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 PCDHB15Q9Y5E8 787 aa10.39□□□□□ -0.75
TRIM35-202ENST00000519219 DYNC1LI2O43237 492 aaPredicted RBP10.38□□□□□ -0.75
TRIM35-202ENST00000519219 B4GALT4O60513 344 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 SLC16A2P36021 539 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 SLC1A4P43007 532 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 RABGGTBP53611 331 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 ITGA7Q13683 1181 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 CCDC85BQ15834 202 aaPredicted RBP10.38□□□□□ -0.75
TRIM35-202ENST00000519219 FSCN1Q16658 493 aaKnown RBP10.38□□□□□ -0.75
TRIM35-202ENST00000519219 OTOP2Q7RTS6 562 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 TMEM199Q8N511 208 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 HERVK_113Q902F9 699 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 SCLYQ96I15 445 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 GPATCH3Q96I76 525 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 FSD1Q9BTV5 496 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 NOC4LQ9BVI4 516 aaKnown RBP10.38□□□□□ -0.75
TRIM35-202ENST00000519219 NAPBQ9H115 298 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 HIPK3Q9H422 1215 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 CHMP4BQ9H444 224 aaKnown RBP10.38□□□□□ -0.75
TRIM35-202ENST00000519219 SPC25Q9HBM1 224 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 IL23AQ9NPF7 189 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 CYP39A1Q9NYL5 469 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 RAPGEFL1Q9UHV5 662 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 PRR12Q9ULL5 1215 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 SYNPO2Q9UMS6 1093 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 TANC1Q9C0D5 1861 aa10.38□□□□□ -0.75
TRIM35-202ENST00000519219 MUC3AQ02505 3323 aa10.37□□□□□ -0.75
TRIM35-202ENST00000519219 NFIBO00712 420 aa10.37□□□□□ -0.75
TRIM35-202ENST00000519219 TLR3O15455 904 aaKnown RBP10.37□□□□□ -0.75
TRIM35-202ENST00000519219 PDE4BQ07343 736 aa10.37□□□□□ -0.75
TRIM35-202ENST00000519219 TJAP1Q5JTD0 557 aa10.37□□□□□ -0.75
TRIM35-202ENST00000519219 RCSD1Q6JBY9 416 aa10.37□□□□□ -0.75
TRIM35-202ENST00000519219 PSRC1Q6PGN9 363 aaPredicted RBP10.37□□□□□ -0.75
TRIM35-202ENST00000519219 NSMFQ6X4W1 530 aa10.37□□□□□ -0.75
TRIM35-202ENST00000519219 FAM160B2Q86V87 743 aa10.37□□□□□ -0.75
TRIM35-202ENST00000519219 CCPG1Q9ULG6 757 aa10.37□□□□□ -0.75
TRIM35-202ENST00000519219 STX8Q9UNK0 236 aa10.37□□□□□ -0.75
TRIM35-202ENST00000519219 MYH6P13533 1939 aa10.37□□□□□ -0.75
TRIM35-202ENST00000519219 FRMPD2Q68DX3 1309 aaPredicted RBP10.36□□□□□ -0.75
TRIM35-202ENST00000519219 TTC41PQ6P2S7 1318 aa10.36□□□□□ -0.75
TRIM35-202ENST00000519219 SALL3Q9BXA9 1300 aa10.36□□□□□ -0.75
TRIM35-202ENST00000519219 ASB14A6NK59 587 aa10.36□□□□□ -0.75
TRIM35-202ENST00000519219 TSPY2A6NKD2 308 aa10.36□□□□□ -0.75
TRIM35-202ENST00000519219 FGBP02675 491 aa10.36□□□□□ -0.75
TRIM35-202ENST00000519219 CYP2C9P11712 490 aa10.36□□□□□ -0.75
TRIM35-202ENST00000519219 TKFCQ3LXA3 575 aa10.36□□□□□ -0.75
TRIM35-202ENST00000519219 SLC30A10Q6XR72 485 aa10.36□□□□□ -0.75
TRIM35-202ENST00000519219 CHURC1Q8WUH1 139 aa10.36□□□□□ -0.75
TRIM35-202ENST00000519219 GAS2L1Q99501 681 aaPredicted RBP10.36□□□□□ -0.75
TRIM35-202ENST00000519219 NACAP1Q9BZK3 213 aa10.36□□□□□ -0.75
TRIM35-202ENST00000519219 AP5M1Q9H0R1 490 aa10.36□□□□□ -0.75
TRIM35-202ENST00000519219 ZNF287Q9HBT7 754 aa10.36□□□□□ -0.75
TRIM35-202ENST00000519219 TRMT13Q9NUP7 481 aaKnown RBP10.36□□□□□ -0.75
TRIM35-202ENST00000519219 COL4A4P53420 1690 aaPredicted RBP10.35□□□□□ -0.75
TRIM35-202ENST00000519219 RANBP6O60518 1105 aaKnown RBP10.35□□□□□ -0.75
TRIM35-202ENST00000519219 PLA2G6O60733 806 aa10.35□□□□□ -0.75
TRIM35-202ENST00000519219 ARHGEF15O94989 841 aa10.35□□□□□ -0.75
TRIM35-202ENST00000519219 FDX1P10109 184 aa10.35□□□□□ -0.75
TRIM35-202ENST00000519219 IGFBP4P22692 258 aa10.35□□□□□ -0.75
TRIM35-202ENST00000519219 NOVP48745 357 aa10.35□□□□□ -0.75
TRIM35-202ENST00000519219 BAATQ14032 418 aaPredicted RBP10.35□□□□□ -0.75
TRIM35-202ENST00000519219 TTLL4Q14679 1199 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms