RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 GTF2IRD2BQ6EKJ0 949 aa5.9□□□□□ -1.46
SKP1-205ENST00000519054 POMZP3Q6PJE2 187 aa5.9□□□□□ -1.46
SKP1-205ENST00000519054 ZNF605Q86T29 641 aa5.9□□□□□ -1.46
SKP1-205ENST00000519054 GTF2IRD2Q86UP8 949 aa5.9□□□□□ -1.46
SKP1-205ENST00000519054 IRF2BP1Q8IU81 584 aa5.9□□□□□ -1.46
SKP1-205ENST00000519054 KSR1Q8IVT5 923 aa5.9□□□□□ -1.46
SKP1-205ENST00000519054 TRIM59Q8IWR1 403 aa5.9□□□□□ -1.46
SKP1-205ENST00000519054 TRIM55Q9BYV6 548 aa5.9□□□□□ -1.46
SKP1-205ENST00000519054 TBX1O43435 398 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 ITGAVP06756 1048 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 PNLIPP16233 465 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 GTF2F1P35269 517 aaKnown RBP eCLIP5.89□□□□□ -1.47
SKP1-205ENST00000519054 CYP4F8P98187 520 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 LAPTM5Q13571 262 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 EEPD1Q7L9B9 569 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 ZNF227Q86WZ6 799 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 CKAP2LQ8IYA6 745 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 FBXO15Q8NCQ5 510 aaPredicted RBP5.89□□□□□ -1.47
SKP1-205ENST00000519054 BTN2A2Q8WVV5 523 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 FAM84AQ96KN4 292 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 MRGPRX3Q96LB0 322 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 SLC38A3Q99624 504 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 CRTAC1Q9NQ79 661 aa5.89□□□□□ -1.47
SKP1-205ENST00000519054 OR14I1A6ND48 311 aa5.88□□□□□ -1.47
SKP1-205ENST00000519054 C8AP07357 584 aa5.88□□□□□ -1.47
SKP1-205ENST00000519054 MSL3P1P0C860 447 aa5.88□□□□□ -1.47
SKP1-205ENST00000519054 ARL4AP40617 200 aa5.88□□□□□ -1.47
SKP1-205ENST00000519054 SCRN1Q12765 414 aa5.88□□□□□ -1.47
SKP1-205ENST00000519054 RAB33AQ14088 237 aa5.88□□□□□ -1.47
SKP1-205ENST00000519054 ZNF124Q15973 351 aa5.88□□□□□ -1.47
SKP1-205ENST00000519054 SYDE1Q6ZW31 735 aaPredicted RBP5.88□□□□□ -1.47
SKP1-205ENST00000519054 KRTAP9-2Q9BYQ4 174 aa5.88□□□□□ -1.47
SKP1-205ENST00000519054 GPRC5CQ9NQ84 441 aa5.88□□□□□ -1.47
SKP1-205ENST00000519054 ACSL6Q9UKU0 697 aa5.88□□□□□ -1.47
SKP1-205ENST00000519054 L1CAMP32004 1257 aa5.87□□□□□ -1.47
SKP1-205ENST00000519054 MVKQ03426 396 aa5.87□□□□□ -1.47
SKP1-205ENST00000519054 SLC10A6Q3KNW5 377 aa5.87□□□□□ -1.47
SKP1-205ENST00000519054 CPNE8Q86YQ8 564 aa5.87□□□□□ -1.47
SKP1-205ENST00000519054 NKX2-4Q9H2Z4 354 aa5.87□□□□□ -1.47
SKP1-205ENST00000519054 ZNF552Q9H707 407 aaPredicted RBP5.87□□□□□ -1.47
SKP1-205ENST00000519054 GOLGA2P5Q9HBQ8 144 aa5.87□□□□□ -1.47
SKP1-205ENST00000519054 CLEC1BQ9P126 229 aa5.87□□□□□ -1.47
SKP1-205ENST00000519054 NPHP3-ACAD11A0A0J9YXS1 232 aa5.86□□□□□ -1.47
SKP1-205ENST00000519054 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
SKP1-205ENST00000519054 THBDP07204 575 aa5.86□□□□□ -1.47
SKP1-205ENST00000519054 PLS3P13797 630 aa5.86□□□□□ -1.47
SKP1-205ENST00000519054 PAMP19021 973 aa5.86□□□□□ -1.47
SKP1-205ENST00000519054 TACR1P25103 407 aa5.86□□□□□ -1.47
SKP1-205ENST00000519054 PKN1Q16512 942 aa5.86□□□□□ -1.47
SKP1-205ENST00000519054 NPM2Q86SE8 214 aaKnown RBP5.86□□□□□ -1.47
SKP1-205ENST00000519054 COPS5Q92905 334 aa5.86□□□□□ -1.47
SKP1-205ENST00000519054 MCOLN1Q9GZU1 580 aa5.86□□□□□ -1.47
SKP1-205ENST00000519054 EPN3Q9H201 632 aa5.86□□□□□ -1.47
SKP1-205ENST00000519054 CYP26B1Q9NR63 512 aa5.86□□□□□ -1.47
SKP1-205ENST00000519054 MYOCOSA0A1B0GUC4 107 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 A0A1W2PQJ5 194 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 NUDT19A8MXV4 375 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 AGRPO00253 132 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 U2SURPO15042 1029 aaKnown RBP5.85□□□□□ -1.47
SKP1-205ENST00000519054 MPOP05164 745 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 SNRPB2P08579 225 aaKnown RBP5.85□□□□□ -1.47
SKP1-205ENST00000519054 ECI1P42126 302 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 KCNJ6P48051 423 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 ERVFRD-1P60508 538 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 CYP4F3Q08477 520 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 RAB3GAP1Q15042 981 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 SF1Q15637 639 aaKnown RBP5.85□□□□□ -1.47
SKP1-205ENST00000519054 TMEM132EQ6IEE7 984 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 KCNN1Q92952 543 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 SLC26A8Q96RN1 970 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 TNFRSF12AQ9NP84 129 aa5.85□□□□□ -1.47
SKP1-205ENST00000519054 TRBV23OR9-2A0A075B6M9 112 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 CCDC85CA6NKD9 419 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 GRIA2P42262 883 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 MBLAC2Q68D91 279 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 BICRALQ6AI39 1079 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 KRTAP19-1Q8IUB9 90 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 FRS2Q8WU20 508 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 PPP1R16BQ96T49 567 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 KRTAP4-12Q9BQ66 201 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 PDLIM7Q9NR12 457 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 GULP1Q9UBP9 304 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 RWDD3Q9Y3V2 267 aa5.84□□□□□ -1.47
SKP1-205ENST00000519054 A0A1W2PQU0 124 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 C7orf72A4D263 438 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 ETV2O00321 342 aaPredicted RBP5.83□□□□□ -1.48
SKP1-205ENST00000519054 NFIBO00712 420 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 PEX10O60683 326 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 TMEM253P0C7T8 217 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 HOXC12P31275 282 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 VIPR1P32241 457 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 CORO7P57737 925 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 PPP2R2AP63151 447 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 SRSF3P84103 164 aaKnown RBP5.83□□□□□ -1.48
SKP1-205ENST00000519054 PRSS53Q2L4Q9 553 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 NLGN2Q8NFZ4 835 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 NPLOC4Q8TAT6 608 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 HIRIP3Q9BW71 556 aaPredicted RBP5.83□□□□□ -1.48
SKP1-205ENST00000519054 SGPP1Q9BX95 441 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms