RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ADAMTS6Q9UKP5 1117 aa5.56□□□□□ -1.52
VPS13B-207ENST00000518569 GPR55Q9Y2T6 319 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-207ENST00000518569 CCDC163A0A0D9SF12 145 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 STXBP3O00186 592 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 TBC1D8O95759 1140 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 SEPHS1P49903 392 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 GFRA1P56159 465 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 SCRN1Q12765 414 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 MAP4K2Q12851 820 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 NR0B2Q15466 257 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 TESK1Q15569 626 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 C2orf27AQ580R0 203 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 HLA-DQA1Q5Y7H0 255 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 CBLL1Q75N03 491 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 KSR1Q8IVT5 923 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 LILRB2Q8N423 598 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 OXR1Q8N573 874 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 KCTD13Q8WZ19 329 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 PTCHD1Q96NR3 888 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 SLC26A8Q96RN1 970 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 LGR4Q9BXB1 951 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 CTNND2Q9UQB3 1225 aa5.55□□□□□ -1.52
VPS13B-207ENST00000518569 A0A1W2PQ45 241 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-207ENST00000518569 A0A1W2PQY0 241 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 FITM1A5D6W6 292 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 FADS2P1A8MWK0 482 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 HPXP02790 462 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 SNRPB2P08579 225 aaKnown RBP5.54□□□□□ -1.52
VPS13B-207ENST00000518569 FAM153BP0C7A2 387 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 PABPC1P11940 636 aaKnown RBP5.54□□□□□ -1.52
VPS13B-207ENST00000518569 CYP4F3Q08477 520 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 ACBD5Q5T8D3 534 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-207ENST00000518569 E4F1Q66K89 784 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-207ENST00000518569 IQCEQ6IPM2 695 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 NSMFQ6X4W1 530 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 ZPBP2Q6X784 338 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 SCUBE1Q8IWY4 988 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 NAT16Q8N8M0 369 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 TMEM52Q8NDY8 209 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 ZSWIM2Q8NEG5 633 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 FLAD1Q8NFF5 587 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 MMP19Q99542 508 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 RC3H2Q9HBD1 1191 aaKnown RBP5.54□□□□□ -1.52
VPS13B-207ENST00000518569 C19orf73Q9NVV2 129 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 EBF1Q9UH73 591 aa5.54□□□□□ -1.52
VPS13B-207ENST00000518569 THBDP07204 575 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 PAMP19021 973 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 GRIA2P42262 883 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 AFMP43652 599 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 CEBPAP49715 358 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-207ENST00000518569 SNX17Q15036 470 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 TMEM67Q5HYA8 995 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 SLC35F1Q5T1Q4 408 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 ATG4DQ86TL0 474 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-207ENST00000518569 LILRA2Q8N149 483 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 KREMEN2Q8NCW0 462 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 NPLOC4Q8TAT6 608 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 FRS2Q8WU20 508 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 OSBP2Q969R2 916 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 ASIC4Q96FT7 647 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 C1orf159Q96HA4 380 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 HHIPL1Q96JK4 782 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 IPO9Q96P70 1041 aaKnown RBP5.53□□□□□ -1.52
VPS13B-207ENST00000518569 IER2Q9BTL4 223 aa5.53□□□□□ -1.52
VPS13B-207ENST00000518569 TLDC2A0PJX2 215 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 PRODHO43272 600 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 NRDCO43847 1150 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 DLX3O60479 287 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 RAC2P15153 192 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 ECI1P42126 302 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 KCNJ6P48051 423 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 HK2P52789 917 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 SF1Q15637 639 aaKnown RBP5.52□□□□□ -1.53
VPS13B-207ENST00000518569 TMEM145Q8NBT3 493 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 NLGN2Q8NFZ4 835 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 SH3TC2Q8TF17 1288 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 KISS1RQ969F8 398 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-207ENST00000518569 RNPC3Q96LT9 517 aaKnown RBP5.52□□□□□ -1.53
VPS13B-207ENST00000518569 CDC6Q99741 560 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 DHRS4Q9BTZ2 278 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 SP110Q9HB58 689 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 TMEM260Q9NX78 707 aa5.52□□□□□ -1.53
VPS13B-207ENST00000518569 TRBV23-1A0A0A0MS06 115 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 NPHP3-ACAD11A0A0J9YXS1 232 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 WTIPA6NIX2 430 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-207ENST00000518569 PLS3P13797 630 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 CORO7P57737 925 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 RTP1P59025 263 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 SUMO1P63165 101 aaKnown RBP5.51□□□□□ -1.53
VPS13B-207ENST00000518569 KCNAB2Q13303 367 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 SLC14A2Q15849 920 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 YOD1Q5VVQ6 348 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-207ENST00000518569 OGFOD2Q6N063 350 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 GALNT18Q6P9A2 607 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 RSPO2Q6UXX9 243 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-207ENST00000518569 SLCO6A1Q86UG4 719 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 GPRC5CQ9NQ84 441 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 TBX22Q9Y458 520 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 NPFFR2Q9Y5X5 522 aa5.51□□□□□ -1.53
VPS13B-207ENST00000518569 PTCH2Q9Y6C5 1203 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms