RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 TMTC2Q8N394 836 aa24.61■■□□□ 1.53
MTCL1-204ENST00000517554 JAKMIP1Q96N16 626 aaKnown RBP24.61■■□□□ 1.53
MTCL1-204ENST00000517554 PURBQ96QR8 312 aaKnown RBP24.61■■□□□ 1.53
MTCL1-204ENST00000517554 MAP3K14Q99558 947 aa24.61■■□□□ 1.53
MTCL1-204ENST00000517554 RIOX1Q9H6W3 641 aa24.61■■□□□ 1.53
MTCL1-204ENST00000517554 CYP39A1Q9NYL5 469 aa24.61■■□□□ 1.53
MTCL1-204ENST00000517554 PPP1R11O60927 126 aaPredicted RBP24.6■■□□□ 1.53
MTCL1-204ENST00000517554 DDAH1O94760 285 aa24.6■■□□□ 1.53
MTCL1-204ENST00000517554 USH1GQ495M9 461 aa24.6■■□□□ 1.53
MTCL1-204ENST00000517554 NFXL1Q6ZNB6 911 aa24.6■■□□□ 1.53
MTCL1-204ENST00000517554 BRPF3Q9ULD4 1205 aa24.6■■□□□ 1.53
MTCL1-204ENST00000517554 TNRC18O15417 2968 aaPredicted RBP24.6■■□□□ 1.53
MTCL1-204ENST00000517554 SOWAHBA6NEL2 793 aa24.59■■□□□ 1.53
MTCL1-204ENST00000517554 CCDC69A6NI79 296 aa24.59■■□□□ 1.53
MTCL1-204ENST00000517554 MAMDC4Q6UXC1 1216 aa24.59■■□□□ 1.53
MTCL1-204ENST00000517554 NSMFQ6X4W1 530 aa24.59■■□□□ 1.53
MTCL1-204ENST00000517554 DHX16O60231 1041 aaKnown RBP24.59■■□□□ 1.53
MTCL1-204ENST00000517554 MLLT1Q03111 559 aaPredicted RBP24.59■■□□□ 1.53
MTCL1-204ENST00000517554 UBE2Q1Q7Z7E8 422 aa24.59■■□□□ 1.53
MTCL1-204ENST00000517554 DDX49Q9Y6V7 483 aaKnown RBP24.59■■□□□ 1.53
MTCL1-204ENST00000517554 POTEB2H3BUK9 544 aa24.58■■□□□ 1.52
MTCL1-204ENST00000517554 SEC24BO95487 1268 aa24.58■■□□□ 1.52
MTCL1-204ENST00000517554 SNAI1O95863 264 aaPredicted RBP24.58■■□□□ 1.52
MTCL1-204ENST00000517554 BAATQ14032 418 aaPredicted RBP24.58■■□□□ 1.52
MTCL1-204ENST00000517554 ZNF467Q7Z7K2 595 aaPredicted RBP24.58■■□□□ 1.52
MTCL1-204ENST00000517554 CCDC144CPQ8IYA2 1237 aa24.58■■□□□ 1.52
MTCL1-204ENST00000517554 PIGSQ96S52 555 aa24.58■■□□□ 1.52
MTCL1-204ENST00000517554 PLEKHA8P1O95397 391 aa24.57■■□□□ 1.52
MTCL1-204ENST00000517554 HMGB1P09429 215 aaKnown RBP24.57■■□□□ 1.52
MTCL1-204ENST00000517554 APOA5Q6Q788 366 aa24.57■■□□□ 1.52
MTCL1-204ENST00000517554 TBC1D5Q92609 795 aa24.57■■□□□ 1.52
MTCL1-204ENST00000517554 SLC12A7Q9Y666 1083 aa24.57■■□□□ 1.52
MTCL1-204ENST00000517554 PFASO15067 1338 aa24.57■■□□□ 1.52
MTCL1-204ENST00000517554 LCTP09848 1927 aa24.57■■□□□ 1.52
MTCL1-204ENST00000517554 ZBTB5O15062 677 aa24.56■■□□□ 1.52
MTCL1-204ENST00000517554 TFRCP02786 760 aaKnown RBP24.56■■□□□ 1.52
MTCL1-204ENST00000517554 ZNF865P0CJ78 1059 aaPredicted RBP24.56■■□□□ 1.52
MTCL1-204ENST00000517554 RPS6KB1P23443 525 aa24.56■■□□□ 1.52
MTCL1-204ENST00000517554 MNX1P50219 401 aaPredicted RBP24.56■■□□□ 1.52
MTCL1-204ENST00000517554 SLC30A10Q6XR72 485 aa24.56■■□□□ 1.52
MTCL1-204ENST00000517554 FBXO11Q86XK2 927 aa24.56■■□□□ 1.52
MTCL1-204ENST00000517554 CMTR1Q8N1G2 835 aaKnown RBP24.56■■□□□ 1.52
MTCL1-204ENST00000517554 CTCFLQ8NI51 663 aaPredicted RBP24.56■■□□□ 1.52
MTCL1-204ENST00000517554 PNMA2Q9UL42 364 aa24.56■■□□□ 1.52
MTCL1-204ENST00000517554 OGDHLQ9ULD0 1010 aa24.56■■□□□ 1.52
MTCL1-204ENST00000517554 SYNGAP1Q96PV0 1343 aa24.55■■□□□ 1.52
MTCL1-204ENST00000517554 OPLAHO14841 1288 aa24.55■■□□□ 1.52
MTCL1-204ENST00000517554 CNGA1P29973 690 aa24.55■■□□□ 1.52
MTCL1-204ENST00000517554 BLOC1S2Q6QNY1 142 aa24.55■■□□□ 1.52
MTCL1-204ENST00000517554 HOMER1Q86YM7 354 aa24.55■■□□□ 1.52
MTCL1-204ENST00000517554 SRBD1Q8N5C6 995 aaKnown RBP24.55■■□□□ 1.52
MTCL1-204ENST00000517554 MSL3Q8N5Y2 521 aaKnown RBP24.55■■□□□ 1.52
MTCL1-204ENST00000517554 CASTP20810 708 aaKnown RBP24.54■■□□□ 1.52
MTCL1-204ENST00000517554 Q6ZUG5 572 aa24.54■■□□□ 1.52
MTCL1-204ENST00000517554 MICU3Q86XE3 530 aa24.54■■□□□ 1.52
MTCL1-204ENST00000517554 FANCBQ8NB91 859 aa24.54■■□□□ 1.52
MTCL1-204ENST00000517554 DDX20Q9UHI6 824 aaKnown RBP24.54■■□□□ 1.52
MTCL1-204ENST00000517554 ABCB11O95342 1321 aa24.54■■□□□ 1.52
MTCL1-204ENST00000517554 KIF5BP33176 963 aa24.54■■□□□ 1.52
MTCL1-204ENST00000517554 RPS6P62753 249 aaKnown RBP24.54■■□□□ 1.52
MTCL1-204ENST00000517554 ANO1Q5XXA6 986 aa24.54■■□□□ 1.52
MTCL1-204ENST00000517554 ARMCX2Q7L311 632 aa24.54■■□□□ 1.52
MTCL1-204ENST00000517554 SPZ1Q9BXG8 430 aa24.54■■□□□ 1.52
MTCL1-204ENST00000517554 AMNQ9BXJ7 453 aa24.54■■□□□ 1.52
MTCL1-204ENST00000517554 AGXT2Q9BYV1 514 aa24.54■■□□□ 1.52
MTCL1-204ENST00000517554 KATNBL1Q9H079 304 aa24.54■■□□□ 1.52
MTCL1-204ENST00000517554 ZSWIM6Q9HCJ5 1215 aa24.54■■□□□ 1.52
MTCL1-204ENST00000517554 PTPDC1A2A3K4 754 aa24.53■■□□□ 1.52
MTCL1-204ENST00000517554 SEPT4O43236 478 aa24.53■■□□□ 1.52
MTCL1-204ENST00000517554 CALM1P0DP23 149 aa24.53■■□□□ 1.52
MTCL1-204ENST00000517554 CALM2P0DP24 149 aa24.53■■□□□ 1.52
MTCL1-204ENST00000517554 CALM3P0DP25 149 aa24.53■■□□□ 1.52
MTCL1-204ENST00000517554 RNF207Q6ZRF8 634 aa24.53■■□□□ 1.52
MTCL1-204ENST00000517554 DIS3LQ8TF46 1054 aaKnown RBP24.53■■□□□ 1.52
MTCL1-204ENST00000517554 PIBF1Q8WXW3 757 aa24.53■■□□□ 1.52
MTCL1-204ENST00000517554 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.53■■□□□ 1.52
MTCL1-204ENST00000517554 NRBP1Q9UHY1 535 aa24.53■■□□□ 1.52
MTCL1-204ENST00000517554 BAZ2BQ9UIF8 2168 aaKnown RBP24.52■■□□□ 1.52
MTCL1-204ENST00000517554 KLF18A0A0U1RQI7 1052 aa24.52■■□□□ 1.52
MTCL1-204ENST00000517554 APOBRQ0VD83 1088 aa24.52■■□□□ 1.52
MTCL1-204ENST00000517554 FBXL16Q8N461 479 aa24.52■■□□□ 1.52
MTCL1-204ENST00000517554 RGS22Q8NE09 1264 aa24.52■■□□□ 1.52
MTCL1-204ENST00000517554 BRF1Q92994 677 aa24.52■■□□□ 1.52
MTCL1-204ENST00000517554 FAM217BQ9NTX9 383 aaPredicted RBP24.52■■□□□ 1.52
MTCL1-204ENST00000517554 PNMA6FA0A0J9YX94 578 aa24.51■■□□□ 1.51
MTCL1-204ENST00000517554 CALML3P27482 149 aa24.51■■□□□ 1.51
MTCL1-204ENST00000517554 PSMA5P28066 241 aa24.51■■□□□ 1.51
MTCL1-204ENST00000517554 SMARCA1P28370 1054 aa24.51■■□□□ 1.51
MTCL1-204ENST00000517554 C8orf34Q49A92 452 aa24.51■■□□□ 1.51
MTCL1-204ENST00000517554 TMTC3Q6ZXV5 915 aa24.51■■□□□ 1.51
MTCL1-204ENST00000517554 RUFY3Q7L099 469 aa24.51■■□□□ 1.51
MTCL1-204ENST00000517554 COL20A1Q9P218 1284 aa24.51■■□□□ 1.51
MTCL1-204ENST00000517554 PCDHA1Q9Y5I3 950 aa24.51■■□□□ 1.51
MTCL1-204ENST00000517554 FARP2O94887 1054 aaPredicted RBP24.5■■□□□ 1.51
MTCL1-204ENST00000517554 TM6SF1Q9BZW5 370 aa24.5■■□□□ 1.51
MTCL1-204ENST00000517554 MRPL11Q9Y3B7 192 aaKnown RBP24.5■■□□□ 1.51
MTCL1-204ENST00000517554 ZBTB43O43298 467 aa24.5■■□□□ 1.51
MTCL1-204ENST00000517554 ADCY6O43306 1168 aa24.5■■□□□ 1.51
MTCL1-204ENST00000517554 GNAQP50148 359 aa24.5■■□□□ 1.51
MTCL1-204ENST00000517554 ACVR2BQ13705 512 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms