RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 CSF2RAP15509 400 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 GJA9P57773 515 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 BEX3Q00994 111 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SKIV2LQ15477 1246 aaKnown RBP8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 FSCN1Q16658 493 aaKnown RBP8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CXCL17Q6UXB2 119 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 KCTD1Q719H9 257 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 TLK2Q86UE8 772 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 MICALL1Q8N3F8 863 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 NEDD1Q8NHV4 660 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 MKL1Q969V6 931 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SEZ6LQ9BYH1 1024 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 HIPK3Q9H422 1215 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 DCTPP1Q9H773 170 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 RAD50Q92878 1312 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SIPA1L1O43166 1804 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 TRIM6-TRIM34B2RNG4 842 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 DHX16O60231 1041 aaKnown RBP8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 IGHA2P01877 340 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SUPT20HL2P0C7V6 817 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ACTN1P12814 892 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ITGB8P26012 769 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CYP2C18P33260 490 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CPT1AP50416 773 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 EPHB4P54760 987 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CCL23P55773 120 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SNAP25P60880 206 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CNTN2Q02246 1040 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PDE4DQ08499 809 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ITGA7Q13683 1181 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 GRIN2CQ14957 1233 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CCDC85BQ15834 202 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ANKRD45Q5TZF3 282 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 IQSEC1Q6DN90 963 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 RCSD1Q6JBY9 416 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ZNF365Q70YC5 407 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 OTOP2Q7RTS6 562 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 RETREG2Q8NC44 543 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 KLHDC9Q8NEP7 349 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 REPS2Q8NFH8 660 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 GMCL1Q96IK5 515 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 AGBL1Q96MI9 1066 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 TTYH1Q9H313 450 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PNMA2Q9UL42 364 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SLC4A7Q9Y6M7 1214 aa8.69□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PLXNB2O15031 1838 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 NAV1Q8NEY1 1877 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 DNAJC25-GNG10A0A024R161 153 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 MYADML2A6NDP7 307 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 KIF28PB7ZC32 967 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 GTPBP6O43824 516 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 MYL3P08590 195 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 MX1P20591 662 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CALML3P27482 149 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CST5P28325 142 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CTDSPL2Q05D32 466 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 TJAP1Q5JTD0 557 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 C20orf194Q5TEA3 1177 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 FBXO16Q8IX29 292 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 DCAF4Q8WV16 495 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 DCBLD2Q96PD2 775 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SEC62Q99442 399 aaKnown RBP8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 FTOQ9C0B1 505 aaKnown RBP eCLIP8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PRDM12Q9H4Q4 367 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 EPB41L4AQ9HCS5 686 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 GPCPD1Q9NPB8 672 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 IL23AQ9NPF7 189 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 A1CFQ9NQ94 594 aaKnown RBP8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 POLR3EQ9NVU0 708 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 TBX21Q9UL17 535 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PRR12Q9ULL5 1215 aa8.68□□□□□ -1.02
TNFRSF11B-202ENST00000517352 LAMA2P24043 3122 aaKnown RBP8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SLC16A2P36021 539 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 TMEM240Q5SV17 173 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 FOCADQ5VW36 1801 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PPP2R2DQ66LE6 453 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 FAM126BQ8IXS8 530 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 OR6J1Q8NGC5 347 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 RILPL2Q969X0 211 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 EVI5LQ96CN4 794 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ROBO3Q96MS0 1386 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CRBNQ96SW2 442 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PBX4Q9BYU1 374 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 WDR11Q9BZH6 1224 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 VTA1Q9NP79 307 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 THEGQ9P2T0 379 aa8.67□□□□□ -1.02
TNFRSF11B-202ENST00000517352 UNC80Q8N2C7 3258 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 FRMPD2Q68DX3 1309 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 IGKV6D-41A0A0C4DH26 115 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 GRXCR1A8MXD5 290 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ICAM1P05362 532 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 TOP1P11387 765 aaKnown RBP8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SMPD1P17405 629 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PBX2P40425 430 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CDK7P50613 346 aa8.66□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PSMC6P62333 389 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms