RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 MAMDC4Q6UXC1 1216 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 POLNQ7Z5Q5 900 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 BMP8AQ7Z5Y6 402 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 MRGPREQ86SM8 312 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 TAX1BP1Q86VP1 789 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZNF808Q8N4W9 903 aaPredicted RBP0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 LINC00482Q8N8I6 264 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 FAM98AQ8NCA5 519 aaKnown RBP0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 BEND2Q8NDZ0 799 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 FBXO18Q8NFZ0 1043 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZNF384Q8TF68 577 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZCCHC14Q8WYQ9 949 aaKnown RBP0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 HAS1Q92839 578 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 MBD6Q96DN6 1003 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 COX4I2Q96KJ9 171 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 OSMRQ99650 979 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 TRMOQ9BU70 441 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 PICK1Q9NRD5 415 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 SALL4Q9UJQ4 1053 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 SMAD5-AS1Q9Y6J3 95 aa0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP0.13□□□□□ -2.39
SNORA40.16-201ENST00000517238 ATAD2Q6PL18 1390 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 GRID2O43424 1007 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZNF862O60290 1169 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 LRIG2O94898 1065 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 THBS3P49746 956 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZNF134P52741 427 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 PRR5P85299 388 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 PTPAQ15257 358 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 EZH2Q15910 746 aaKnown RBP0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZNF423Q2M1K9 1284 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 ERCC6LQ2NKX8 1250 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 MST1LQ2TV78 715 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 C11orf91Q3C1V1 193 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 PRAMEF18Q5VWM3 479 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 CDC37L1Q7L3B6 337 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 WAPLQ7Z5K2 1190 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 TMPRSS6Q8IU80 811 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 SH2D3CQ8N5H7 860 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 NUP43Q8NFH3 380 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZNF524Q96C55 264 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 HHIPL1Q96JK4 782 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 MARK4Q96L34 752 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZKSCAN3Q9BRR0 538 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 HERPUD2Q9BSE4 406 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 HIRIP3Q9BW71 556 aaPredicted RBP0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 TMEM168Q9H0V1 697 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 CLEC4MQ9H2X3 399 aaPredicted RBP0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 ANTXR1Q9H6X2 564 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 SEC61A2Q9H9S3 476 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 DBR1Q9UK59 544 aaKnown RBP0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 KMT2DO14686 5537 aa0.12□□□□□ -2.39
SNORA40.16-201ENST00000517238 H0Y858 1186 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 LINC01565O15544 149 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 ATP9BO43861 1147 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 RAD17O75943 681 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 CNOT4O95628 575 aaKnown RBP0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 LMNB1P20700 586 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 PMLP29590 882 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 ERVK-24P63145 666 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 RHDQ02161 417 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 NHLH1Q02575 133 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 FAAP100Q0VG06 881 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 AP3B2Q13367 1082 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 SRSF7Q16629 238 aaKnown RBP eCLIP0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 KRTAP24-1Q3LI83 254 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 HSF5Q4G112 596 aaPredicted RBP0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 C9orf50Q5SZB4 431 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 C11orf87Q6NUJ2 197 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 PAQR3Q6TCH7 311 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 BNC2Q6ZN30 1099 aaPredicted RBP0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 LRP10Q7Z4F1 713 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZNF329Q86UD4 541 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 WIPF2Q8TF74 440 aaPredicted RBP0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 SCG3Q8WXD2 468 aaKnown RBP0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 TLR9Q9NR96 1032 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 ZDHHC9Q9Y397 364 aa0.11□□□□□ -2.39
SNORA40.16-201ENST00000517238 COL2A1P02458 1487 aaPredicted RBP0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 WTIPA6NIX2 430 aaPredicted RBP0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 PPP1R15AO75807 674 aaPredicted RBP0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 DDNO94850 711 aaPredicted RBP0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 CYBBP04839 570 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 SERPINB2P05120 415 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 CYP2C8P10632 490 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 BMP6P22004 513 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 CES1P23141 567 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 HNRNPKP61978 463 aaKnown RBP eCLIP0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 SLC25A3Q00325 362 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 CRHR2Q13324 411 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 AMHR2Q16671 573 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 LY6G5CQ5SRR4 150 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 NBPF6Q5VWK0 638 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 LETMD1Q6P1Q0 360 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 RHBDF2Q6PJF5 856 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 RFX6Q8HWS3 928 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 DCP1BQ8IZD4 617 aaKnown RBP0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 KYQ8NBH2 561 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 RIN3Q8TB24 985 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 PROKR1Q8TCW9 393 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 FRS2Q8WU20 508 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms