RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 SEC23AQ15436 765 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CDC37Q16543 378 aaPredicted RBP7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 RASGRP2Q7LDG7 609 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 MCF2L2Q86YR7 1114 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CCDC144CPQ8IYA2 1237 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 TMTC2Q8N394 836 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 PCSK9Q8NBP7 692 aaKnown RBP7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 NUP133Q8WUM0 1156 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 AGBL1Q96MI9 1066 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 ESYT1Q9BSJ8 1104 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 KATNBL1Q9H079 304 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 UPF3AQ9H1J1 476 aaKnown RBP7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 HOMER2Q9NSB8 354 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 ZHX1Q9UKY1 873 aaPredicted RBP7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 PHF24Q9UPV7 400 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 Q9Y3F1 56 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 RBM8AQ9Y5S9 174 aaKnown RBP7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 MCM3APO60318 1980 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 ELP1O95163 1332 aa7□□□□□ -1.29
SCARNA18.1-201ENST00000516330 E7EWF7 191 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CDC45O75419 566 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CABYRO75952 493 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 SNAI1O95863 264 aaPredicted RBP6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CALM1P0DP23 149 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CALM2P0DP24 149 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CALM3P0DP25 149 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 SMARCA1P28370 1054 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 KIF5BP33176 963 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 ALDH5A1P51649 535 aaPredicted RBP6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 RCAN1P53805 252 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 GJA9P57773 515 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 KRT32Q14532 448 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 WTAPQ15007 396 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 HABP4Q5JVS0 413 aaKnown RBP6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CCDC174Q6PII3 467 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 NSMFQ6X4W1 530 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 MB21D2Q8IYB1 491 aaPredicted RBP6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 C7orf61Q8IZ16 206 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 MTMR8Q96EF0 704 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CCDC136Q96JN2 1154 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 GLT1D1Q96MS3 346 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 GDF15Q99988 308 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 ZKSCAN3Q9BRR0 538 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 LSG1Q9H089 658 aaKnown RBP6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 INCENPQ9NQS7 918 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 PRKAG2Q9UGJ0 569 aa6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 MRPL11Q9Y3B7 192 aaKnown RBP6.99□□□□□ -1.29
SCARNA18.1-201ENST00000516330 A0A1W2PQ45 241 aaPredicted RBP6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 A0A1W2PQY0 241 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 PTPDC1A2A3K4 754 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 NFIBO00712 420 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 IFIT3O14879 490 aaKnown RBP6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 ZBTB5O15062 677 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 ZEB2O60315 1214 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 HMGB1P09429 215 aaKnown RBP6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 MCM5P33992 734 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 SLC16A2P36021 539 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 LIFRP42702 1097 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 GNAQP50148 359 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 RPS6P62753 249 aaKnown RBP6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 PTH1RQ03431 593 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 TROAPQ12815 778 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 GRM4Q14833 912 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 LRRC26Q2I0M4 334 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CCDC144BQ3MJ40 725 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 MUM1L1Q5H9M0 696 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 TTBK2Q6IQ55 1244 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 GPR153Q6NV75 609 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CHRDL2Q6WN34 429 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 SLC30A10Q6XR72 485 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 RNF207Q6ZRF8 634 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 ANKRD33Q7Z3H0 272 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CATIPQ7Z7H3 387 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 TLK2Q86UE8 772 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 SGMS1Q86VZ5 419 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 FBXO11Q86XK2 927 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 ADGRF4Q8IZF3 695 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 KLHDC9Q8NEP7 349 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CTCFLQ8NI51 663 aaPredicted RBP6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 CLEC4DQ8WXI8 215 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 TOX2Q96NM4 488 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 LZTS2Q9BRK4 669 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 SPZ1Q9BXG8 430 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 AMNQ9BXJ7 453 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 SENP6Q9GZR1 1112 aaPredicted RBP6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 RIOX1Q9H6W3 641 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 GPCPD1Q9NPB8 672 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 ANO2Q9NQ90 1003 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 STARD7Q9NQZ5 370 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 MTMR7Q9Y216 660 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 TANC1Q9C0D5 1861 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 ASTN1O14525 1302 aa6.98□□□□□ -1.29
SCARNA18.1-201ENST00000516330 KIAA1217Q5T5P2 1943 aa6.97□□□□□ -1.29
SCARNA18.1-201ENST00000516330 RANBP2P49792 3224 aaKnown RBP6.97□□□□□ -1.29
SCARNA18.1-201ENST00000516330 NID2Q14112 1375 aa6.97□□□□□ -1.29
SCARNA18.1-201ENST00000516330 A0A0U1RQG5 324 aaPredicted RBP6.97□□□□□ -1.29
SCARNA18.1-201ENST00000516330 RBM47A0AV96 593 aaKnown RBP6.97□□□□□ -1.29
SCARNA18.1-201ENST00000516330 PALM3A6NDB9 673 aaPredicted RBP6.97□□□□□ -1.29
SCARNA18.1-201ENST00000516330 SOWAHBA6NEL2 793 aa6.97□□□□□ -1.29
SCARNA18.1-201ENST00000516330 KLRF2D3W0D1 207 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms