RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CCDC12Q8WUD4 166 aaPredicted RBP24.19■■□□□ 1.46
LSM6-207ENST00000515311 MRPL11Q9Y3B7 192 aaKnown RBP24.19■■□□□ 1.46
LSM6-207ENST00000515311 ALAS1P13196 640 aa24.18■■□□□ 1.46
LSM6-207ENST00000515311 XBP1P17861 261 aa24.18■■□□□ 1.46
LSM6-207ENST00000515311 Q3C1V9 767 aa24.18■■□□□ 1.46
LSM6-207ENST00000515311 CHST13Q8NET6 341 aa24.18■■□□□ 1.46
LSM6-207ENST00000515311 COA7Q96BR5 231 aa24.18■■□□□ 1.46
LSM6-207ENST00000515311 AIFM3Q96NN9 605 aa24.18■■□□□ 1.46
LSM6-207ENST00000515311 MROH8Q9H579 483 aa24.18■■□□□ 1.46
LSM6-207ENST00000515311 RIPK3Q9Y572 518 aa24.18■■□□□ 1.46
LSM6-207ENST00000515311 NAPAP54920 295 aa24.17■■□□□ 1.46
LSM6-207ENST00000515311 TEX2Q8IWB9 1127 aa24.17■■□□□ 1.46
LSM6-207ENST00000515311 RGS22Q8NE09 1264 aa24.17■■□□□ 1.46
LSM6-207ENST00000515311 CCDC148Q8NFR7 591 aa24.17■■□□□ 1.46
LSM6-207ENST00000515311 TRERF1Q96PN7 1200 aa24.17■■□□□ 1.46
LSM6-207ENST00000515311 BEGAINQ9BUH8 593 aa24.17■■□□□ 1.46
LSM6-207ENST00000515311 MAF1Q9H063 256 aa24.17■■□□□ 1.46
LSM6-207ENST00000515311 R3HDMLQ9H3Y0 253 aa24.17■■□□□ 1.46
LSM6-207ENST00000515311 RNF146Q9NTX7 359 aa24.17■■□□□ 1.46
LSM6-207ENST00000515311 FBXO40Q9UH90 709 aa24.17■■□□□ 1.46
LSM6-207ENST00000515311 ESYT2A0FGR8 921 aa24.16■■□□□ 1.46
LSM6-207ENST00000515311 TBC1D8O95759 1140 aa24.16■■□□□ 1.46
LSM6-207ENST00000515311 NOM1Q5C9Z4 860 aaKnown RBP24.16■■□□□ 1.46
LSM6-207ENST00000515311 TYW1BQ6NUM6 668 aa24.16■■□□□ 1.46
LSM6-207ENST00000515311 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.16■■□□□ 1.46
LSM6-207ENST00000515311 CLEC4DQ8WXI8 215 aa24.16■■□□□ 1.46
LSM6-207ENST00000515311 FOXD4L1Q9NU39 408 aa24.16■■□□□ 1.46
LSM6-207ENST00000515311 WBP1LQ9NX94 342 aa24.16■■□□□ 1.46
LSM6-207ENST00000515311 VPS54Q9P1Q0 977 aa24.16■■□□□ 1.46
LSM6-207ENST00000515311 DAXXQ9UER7 740 aaPredicted RBP24.16■■□□□ 1.46
LSM6-207ENST00000515311 MGAMO43451 1857 aa24.15■■□□□ 1.46
LSM6-207ENST00000515311 PCNTO95613 3336 aa24.15■■□□□ 1.46
LSM6-207ENST00000515311 TAL1P17542 331 aaPredicted RBP24.15■■□□□ 1.46
LSM6-207ENST00000515311 ERCC3P19447 782 aa24.15■■□□□ 1.46
LSM6-207ENST00000515311 PDCP20941 246 aa24.15■■□□□ 1.46
LSM6-207ENST00000515311 SLC4A3P48751 1232 aa24.15■■□□□ 1.46
LSM6-207ENST00000515311 NCAPG2Q86XI2 1143 aa24.15■■□□□ 1.46
LSM6-207ENST00000515311 JMYQ8N9B5 988 aa24.15■■□□□ 1.46
LSM6-207ENST00000515311 ACAD9Q9H845 621 aa24.15■■□□□ 1.46
LSM6-207ENST00000515311 HOMER2Q9NSB8 354 aa24.15■■□□□ 1.46
LSM6-207ENST00000515311 PLXNB2O15031 1838 aa24.14■■□□□ 1.46
LSM6-207ENST00000515311 OPLAHO14841 1288 aa24.14■■□□□ 1.45
LSM6-207ENST00000515311 MAPK4P31152 587 aa24.14■■□□□ 1.45
LSM6-207ENST00000515311 TRIM29Q14134 588 aa24.14■■□□□ 1.45
LSM6-207ENST00000515311 MUM1L1Q5H9M0 696 aa24.14■■□□□ 1.45
LSM6-207ENST00000515311 MCF2L2Q86YR7 1114 aa24.14■■□□□ 1.45
LSM6-207ENST00000515311 SHISA4Q96DD7 197 aa24.14■■□□□ 1.45
LSM6-207ENST00000515311 C8orf76Q96K31 380 aa24.14■■□□□ 1.45
LSM6-207ENST00000515311 ZMYND12Q9H0C1 365 aa24.14■■□□□ 1.45
LSM6-207ENST00000515311 GLT8D2Q9H1C3 349 aa24.14■■□□□ 1.45
LSM6-207ENST00000515311 PORCNQ9H237 461 aa24.14■■□□□ 1.45
LSM6-207ENST00000515311 CWC22Q9HCG8 908 aaKnown RBP24.14■■□□□ 1.45
LSM6-207ENST00000515311 ZNF236Q9UL36 1845 aa24.14■■□□□ 1.45
LSM6-207ENST00000515311 CALML3P27482 149 aa24.13■■□□□ 1.45
LSM6-207ENST00000515311 GHRHRQ02643 423 aa24.13■■□□□ 1.45
LSM6-207ENST00000515311 GALNT17Q6IS24 598 aa24.13■■□□□ 1.45
LSM6-207ENST00000515311 CCAR1Q8IX12 1150 aaKnown RBP24.13■■□□□ 1.45
LSM6-207ENST00000515311 SAMD3Q8N6K7 520 aa24.13■■□□□ 1.45
LSM6-207ENST00000515311 FBXO18Q8NFZ0 1043 aa24.13■■□□□ 1.45
LSM6-207ENST00000515311 PHF20Q9BVI0 1012 aa24.13■■□□□ 1.45
LSM6-207ENST00000515311 PSTPIP2Q9H939 334 aa24.13■■□□□ 1.45
LSM6-207ENST00000515311 RIC8AQ9NPQ8 531 aa24.13■■□□□ 1.45
LSM6-207ENST00000515311 SMCO2A6NFE2 343 aa24.12■■□□□ 1.45
LSM6-207ENST00000515311 NFIBO00712 420 aa24.12■■□□□ 1.45
LSM6-207ENST00000515311 GNA11P29992 359 aa24.12■■□□□ 1.45
LSM6-207ENST00000515311 ADCY7P51828 1080 aa24.12■■□□□ 1.45
LSM6-207ENST00000515311 SPRYD3Q8NCJ5 442 aa24.12■■□□□ 1.45
LSM6-207ENST00000515311 CUL5Q93034 780 aa24.12■■□□□ 1.45
LSM6-207ENST00000515311 EFCC1Q9HA90 598 aa24.12■■□□□ 1.45
LSM6-207ENST00000515311 C6orf50Q9HD87 102 aa24.12■■□□□ 1.45
LSM6-207ENST00000515311 MAP3K20Q9NYL2 800 aaKnown RBP24.12■■□□□ 1.45
LSM6-207ENST00000515311 PIK3CDO00329 1044 aa24.11■■□□□ 1.45
LSM6-207ENST00000515311 PDIA4P13667 645 aaKnown RBP24.11■■□□□ 1.45
LSM6-207ENST00000515311 MRPL12P52815 198 aaKnown RBP24.11■■□□□ 1.45
LSM6-207ENST00000515311 NLRP5P59047 1200 aa24.11■■□□□ 1.45
LSM6-207ENST00000515311 SP3Q02447 781 aa24.11■■□□□ 1.45
LSM6-207ENST00000515311 LARP1BQ659C4 914 aaKnown RBP24.11■■□□□ 1.45
LSM6-207ENST00000515311 ABRAQ8N0Z2 381 aa24.11■■□□□ 1.45
LSM6-207ENST00000515311 DAGLBQ8NCG7 672 aa24.11■■□□□ 1.45
LSM6-207ENST00000515311 BICD2Q8TD16 824 aa24.11■■□□□ 1.45
LSM6-207ENST00000515311 IPO9Q96P70 1041 aaKnown RBP24.11■■□□□ 1.45
LSM6-207ENST00000515311 GJB4Q9NTQ9 266 aa24.11■■□□□ 1.45
LSM6-207ENST00000515311 PFASO15067 1338 aa24.1■■□□□ 1.45
LSM6-207ENST00000515311 GPR25O00155 361 aa24.1■■□□□ 1.45
LSM6-207ENST00000515311 STRNO43815 780 aa24.1■■□□□ 1.45
LSM6-207ENST00000515311 MMP1P03956 469 aa24.1■■□□□ 1.45
LSM6-207ENST00000515311 HSD17B4P51659 736 aa24.1■■□□□ 1.45
LSM6-207ENST00000515311 LACTBP83111 547 aaPredicted RBP24.1■■□□□ 1.45
LSM6-207ENST00000515311 KRT40Q6A162 431 aa24.1■■□□□ 1.45
LSM6-207ENST00000515311 KCNJ14Q9UNX9 436 aa24.1■■□□□ 1.45
LSM6-207ENST00000515311 ZNFX1Q9P2E3 1918 aaKnown RBP24.1■■□□□ 1.45
LSM6-207ENST00000515311 FCER1AP12319 257 aa24.09■■□□□ 1.45
LSM6-207ENST00000515311 NPY5RQ15761 445 aa24.09■■□□□ 1.45
LSM6-207ENST00000515311 GPR142Q7Z601 462 aa24.09■■□□□ 1.45
LSM6-207ENST00000515311 PLEKHH3Q7Z736 793 aa24.09■■□□□ 1.45
LSM6-207ENST00000515311 A1CFQ9NQ94 594 aaKnown RBP24.09■■□□□ 1.45
LSM6-207ENST00000515311 PCDHA4Q9UN74 947 aa24.09■■□□□ 1.45
LSM6-207ENST00000515311 IVNS1ABPQ9Y6Y0 642 aa24.09■■□□□ 1.45
LSM6-207ENST00000515311 GCOM1H8Y6P7 765 aaPredicted RBP24.08■■□□□ 1.45
LSM6-207ENST00000515311 MEIS2O14770 477 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms