RNA–Protein interactions for RNA: ENST00000515298.5

PAPD4-216, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-216ENST00000515298 SEPHS1P49903 392 aa6.91□□□□□ -1.3
PAPD4-216ENST00000515298 ZNF227Q86WZ6 799 aa6.91□□□□□ -1.3
PAPD4-216ENST00000515298 JAMLQ86YT9 394 aa6.91□□□□□ -1.3
PAPD4-216ENST00000515298 COPS5Q92905 334 aa6.91□□□□□ -1.3
PAPD4-216ENST00000515298 FAM84AQ96KN4 292 aa6.91□□□□□ -1.3
PAPD4-216ENST00000515298 EPN3Q9H201 632 aa6.91□□□□□ -1.3
PAPD4-216ENST00000515298 EPB41L4BQ9H329 900 aa6.91□□□□□ -1.3
PAPD4-216ENST00000515298 DCP1AQ9NPI6 582 aaPredicted RBP6.91□□□□□ -1.3
PAPD4-216ENST00000515298 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.9□□□□□ -1.3
PAPD4-216ENST00000515298 PDE6BP35913 854 aa6.9□□□□□ -1.3
PAPD4-216ENST00000515298 ERVFRD-1P60508 538 aa6.9□□□□□ -1.3
PAPD4-216ENST00000515298 MVKQ03426 396 aa6.9□□□□□ -1.3
PAPD4-216ENST00000515298 CYP4F3Q08477 520 aa6.9□□□□□ -1.3
PAPD4-216ENST00000515298 LAPTM5Q13571 262 aa6.9□□□□□ -1.3
PAPD4-216ENST00000515298 SLC10A6Q3KNW5 377 aa6.9□□□□□ -1.3
PAPD4-216ENST00000515298 KSR1Q8IVT5 923 aa6.9□□□□□ -1.3
PAPD4-216ENST00000515298 CKAP2LQ8IYA6 745 aa6.9□□□□□ -1.3
PAPD4-216ENST00000515298 FBXO15Q8NCQ5 510 aaPredicted RBP6.9□□□□□ -1.3
PAPD4-216ENST00000515298 NUP43Q8NFH3 380 aa6.9□□□□□ -1.3
PAPD4-216ENST00000515298 KRTAP4-12Q9BQ66 201 aa6.9□□□□□ -1.3
PAPD4-216ENST00000515298 NKX2-4Q9H2Z4 354 aa6.9□□□□□ -1.3
PAPD4-216ENST00000515298 ZNF552Q9H707 407 aaPredicted RBP6.9□□□□□ -1.3
PAPD4-216ENST00000515298 CYP26B1Q9NR63 512 aa6.9□□□□□ -1.3
PAPD4-216ENST00000515298 OR14I1A6ND48 311 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 CAPNS1P04632 268 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 C8AP07357 584 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 MSL3P1P0C860 447 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 L1CAMP32004 1257 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 CYP4F8P98187 520 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 SCRN1Q12765 414 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 ADGRF1Q5T601 910 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 NLGN2Q8NFZ4 835 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 BTN2A2Q8WVV5 523 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 ARMC5Q96C12 935 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 TRIM55Q9BYV6 548 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 GOLGA2P5Q9HBQ8 144 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 LRP2BPQ9P2M1 347 aa6.89□□□□□ -1.31
PAPD4-216ENST00000515298 KRTAP9-6A0A140TA67 174 aa6.88□□□□□ -1.31
PAPD4-216ENST00000515298 PAMP19021 973 aa6.88□□□□□ -1.31
PAPD4-216ENST00000515298 SDHBP21912 280 aa6.88□□□□□ -1.31
PAPD4-216ENST00000515298 GTF2F1P35269 517 aaKnown RBP eCLIP6.88□□□□□ -1.31
PAPD4-216ENST00000515298 ARL4AP40617 200 aa6.88□□□□□ -1.31
PAPD4-216ENST00000515298 CORO7P57737 925 aa6.88□□□□□ -1.31
PAPD4-216ENST00000515298 ZNF605Q86T29 641 aa6.88□□□□□ -1.31
PAPD4-216ENST00000515298 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
PAPD4-216ENST00000515298 BHLHE22Q8NFJ8 381 aaPredicted RBP6.88□□□□□ -1.31
PAPD4-216ENST00000515298 TNFRSF12AQ9NP84 129 aa6.88□□□□□ -1.31
PAPD4-216ENST00000515298 GPRC5CQ9NQ84 441 aa6.88□□□□□ -1.31
PAPD4-216ENST00000515298 MSRB2Q9Y3D2 182 aa6.88□□□□□ -1.31
PAPD4-216ENST00000515298 TRBV23OR9-2A0A075B6M9 112 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 NPHP3-ACAD11A0A0J9YXS1 232 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 MYOCOSA0A1B0GUC4 107 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 A0A1W2PQ27 194 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 A0A1W2PQ64 194 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 A0A1W2PQC6 194 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 A0A1W2PQD8 194 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 PEX10O60683 326 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 THBDP07204 575 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 PLS3P13797 630 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 HOXC12P31275 282 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 RBL2Q08999 1139 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 NBPF6Q5VWK0 638 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 SYDE1Q6ZW31 735 aaPredicted RBP6.87□□□□□ -1.31
PAPD4-216ENST00000515298 NPM2Q86SE8 214 aaKnown RBP6.87□□□□□ -1.31
PAPD4-216ENST00000515298 CPNE8Q86YQ8 564 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 NBPF4Q96M43 638 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 SLC26A8Q96RN1 970 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 SLC38A3Q99624 504 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 MCOLN1Q9GZU1 580 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 PDLIM7Q9NR12 457 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 CLEC1BQ9P126 229 aa6.87□□□□□ -1.31
PAPD4-216ENST00000515298 PPP1R1BQ9UD71 204 aaPredicted RBP6.87□□□□□ -1.31
PAPD4-216ENST00000515298 A0A1W2PQU0 124 aa6.86□□□□□ -1.31
PAPD4-216ENST00000515298 HRKO00198 91 aa6.86□□□□□ -1.31
PAPD4-216ENST00000515298 KRT1P04264 644 aa6.86□□□□□ -1.31
PAPD4-216ENST00000515298 SCG5P05408 212 aa6.86□□□□□ -1.31
PAPD4-216ENST00000515298 YBX1P67809 324 aaKnown RBP6.86□□□□□ -1.31
PAPD4-216ENST00000515298 SF1Q15637 639 aaKnown RBP6.86□□□□□ -1.31
PAPD4-216ENST00000515298 ST13P5Q8NFI4 369 aaPredicted RBP6.86□□□□□ -1.31
PAPD4-216ENST00000515298 NPLOC4Q8TAT6 608 aa6.86□□□□□ -1.31
PAPD4-216ENST00000515298 FRS2Q8WU20 508 aa6.86□□□□□ -1.31
PAPD4-216ENST00000515298 MMP19Q99542 508 aa6.86□□□□□ -1.31
PAPD4-216ENST00000515298 HIRIP3Q9BW71 556 aaPredicted RBP6.86□□□□□ -1.31
PAPD4-216ENST00000515298 AGRPO00253 132 aa6.85□□□□□ -1.31
PAPD4-216ENST00000515298 U2SURPO15042 1029 aaKnown RBP6.85□□□□□ -1.31
PAPD4-216ENST00000515298 PPP1R11O60927 126 aaPredicted RBP6.85□□□□□ -1.31
PAPD4-216ENST00000515298 MPOP05164 745 aa6.85□□□□□ -1.31
PAPD4-216ENST00000515298 PPP2R2AP63151 447 aa6.85□□□□□ -1.31
PAPD4-216ENST00000515298 SF3A1Q15459 793 aaKnown RBP6.85□□□□□ -1.31
PAPD4-216ENST00000515298 ZNF124Q15973 351 aa6.85□□□□□ -1.31
PAPD4-216ENST00000515298 MBLAC2Q68D91 279 aa6.85□□□□□ -1.31
PAPD4-216ENST00000515298 CCDC140Q96MF4 163 aa6.85□□□□□ -1.31
PAPD4-216ENST00000515298 PPP1R16BQ96T49 567 aa6.85□□□□□ -1.31
PAPD4-216ENST00000515298 KLHL14Q9P2G3 628 aa6.85□□□□□ -1.31
PAPD4-216ENST00000515298 TEX51A0A1B0GUA7 166 aa6.84□□□□□ -1.31
PAPD4-216ENST00000515298 C7orf72A4D263 438 aa6.84□□□□□ -1.31
PAPD4-216ENST00000515298 ARNTLO00327 626 aa6.84□□□□□ -1.31
PAPD4-216ENST00000515298 TSPAN15O95858 294 aa6.84□□□□□ -1.31
PAPD4-216ENST00000515298 SNRPB2P08579 225 aaKnown RBP6.84□□□□□ -1.31
PAPD4-216ENST00000515298 GRIA2P42262 883 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms