RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 TTC37Q6PGP7 1564 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 BLACEA4D250 179 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 CD53P19397 219 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 ADH7P40394 386 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 NEK3P51956 506 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 SART3Q15020 963 aaKnown RBP8.49□□□□□ -1.05
NPHP3-211ENST00000515289 FAM117BQ6P1L5 589 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 HID1Q8IV36 788 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 TEX2Q8IWB9 1127 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 CDAN1Q8IWY9 1227 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 ARHGEF39Q8N4T4 335 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 GTPBP3Q969Y2 492 aaKnown RBP8.49□□□□□ -1.05
NPHP3-211ENST00000515289 CCDC140Q96MF4 163 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 STRBPQ96SI9 672 aaKnown RBP8.49□□□□□ -1.05
NPHP3-211ENST00000515289 PTPRHQ9HD43 1115 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 MBD5Q9P267 1494 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 SYNGAP1Q96PV0 1343 aa8.49□□□□□ -1.05
NPHP3-211ENST00000515289 ADARB2-AS1A8MUL3 147 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 ERC2O15083 957 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 AVPP01185 164 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 APPP05067 770 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 SLFN14P0C7P3 912 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 MYBL2P10244 700 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 CD247P20963 164 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 CCND1P24385 295 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 ADCYAP1R1P41586 468 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 GFRA1P56159 465 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 ERVK-21P61565 698 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 GTF2H3Q13889 308 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 SKOR2Q2VWA4 1001 aaPredicted RBP8.48□□□□□ -1.05
NPHP3-211ENST00000515289 RGL3Q3MIN7 710 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 CPA6Q8N4T0 437 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 CYB5D2Q8WUJ1 264 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 PPCSQ9HAB8 311 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 GIT1Q9Y2X7 761 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 ARHGEF5Q12774 1597 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 SAMD9LQ8IVG5 1584 aa8.48□□□□□ -1.05
NPHP3-211ENST00000515289 NCOA1Q15788 1441 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 FZD9O00144 591 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 AQP7O14520 342 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 TBX3O15119 743 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 CRTAMO95727 393 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 PF4V1P10720 104 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 CDC25BP30305 580 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 CYP2C19P33261 490 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 RECQLP46063 649 aaPredicted RBP8.47□□□□□ -1.05
NPHP3-211ENST00000515289 IL2P60568 153 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 KRT85P78386 507 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 DSG1Q02413 1049 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 PPM1JQ5JR12 505 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 FAM83BQ5T0W9 1011 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 ERAP2Q6P179 960 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 PODNQ7Z5L7 613 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 DDX53Q86TM3 631 aaKnown RBP8.47□□□□□ -1.05
NPHP3-211ENST00000515289 MORC1Q86VD1 984 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 CCDC155Q8N6L0 562 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 SMC1BQ8NDV3 1235 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 ZNF507Q8TCN5 953 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 CLIP3Q96DZ5 547 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.47□□□□□ -1.05
NPHP3-211ENST00000515289 PICK1Q9NRD5 415 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 SAMD15Q9P1V8 674 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 ANAPC4Q9UJX5 808 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 RCAN3Q9UKA8 241 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 DAAM1Q9Y4D1 1078 aa8.47□□□□□ -1.05
NPHP3-211ENST00000515289 ADGBQ8N7X0 1667 aa8.46□□□□□ -1.05
NPHP3-211ENST00000515289 A0A087WZG4 1122 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 A0A0G2JS52 829 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 ZNF891A8MT65 544 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-211ENST00000515289 CBX4O00257 560 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 NPHP1O15259 732 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 SHOXO15266 292 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 FKBP9O95302 570 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 ITGA4P13612 1032 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 NAT1P18440 290 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 HOXC12P31275 282 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 IARSP41252 1262 aaKnown RBP8.46□□□□□ -1.06
NPHP3-211ENST00000515289 LSSP48449 732 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 PCBP4P57723 403 aaKnown RBP8.46□□□□□ -1.06
NPHP3-211ENST00000515289 GTF2IRD2BQ6EKJ0 949 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 STYK1Q6J9G0 422 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 PSAPL1Q6NUJ1 521 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 FKBP9P1Q75LS8 142 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 EPM2AIP1Q7L775 607 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-211ENST00000515289 GTF2IRD2Q86UP8 949 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 C7orf61Q8IZ16 206 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 IL22RA1Q8N6P7 574 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 ENAHQ8N8S7 591 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-211ENST00000515289 BAHD1Q8TBE0 780 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-211ENST00000515289 TTC17Q96AE7 1141 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 AIFM3Q96NN9 605 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 MDFIQ99750 246 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 ELAC2Q9BQ52 826 aaKnown RBP8.46□□□□□ -1.06
NPHP3-211ENST00000515289 WDR18Q9BV38 432 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 MKRN2Q9H000 416 aaKnown RBP8.46□□□□□ -1.06
NPHP3-211ENST00000515289 ATG3Q9NT62 314 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 CGGBP1Q9UFW8 167 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-211ENST00000515289 LAS1LQ9Y4W2 734 aaKnown RBP8.46□□□□□ -1.06
NPHP3-211ENST00000515289 CDC42BPBQ9Y5S2 1711 aa8.46□□□□□ -1.06
NPHP3-211ENST00000515289 SOBPA7XYQ1 873 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms