RNA–Protein interactions for RNA: ENST00000514561.5

SEC24D-214, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 3,806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-214ENST00000514561 ZBTB21Q9ULJ3 1066 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 USP42Q9H9J4 1324 aaKnown RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 WTIPA6NIX2 430 aaPredicted RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 FAM196BA6NMK8 535 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 KLRF2D3W0D1 207 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 POLR3GO15318 223 aaPredicted RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 RTN2O75298 545 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 IVLP07476 585 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 IBSPP21815 317 aaPredicted RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 GUCY1A2P33402 732 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 SLC1A4P43007 532 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 NLRP12P59046 1061 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 TRIM28Q13263 835 aaKnown RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 PLS1Q14651 629 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 SPA17Q15506 151 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 KRT79Q5XKE5 535 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 USP17L2Q6R6M4 530 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 CCDC91Q7Z6B0 441 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 MB21D2Q8IYB1 491 aaPredicted RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 CACTIN-AS1Q8N1I8 211 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 FBXO22Q8NEZ5 403 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 RUFY1Q96T51 708 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 CSRNP2Q9H175 543 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 TAB2Q9NYJ8 693 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 CWC15Q9P013 229 aaKnown RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 IMPACTQ9P2X3 320 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 ARPP21Q9UBL0 812 aaPredicted RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 COL14A1Q05707 1796 aaKnown RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 GSG1L2A8MUP6 293 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 KIF28PB7ZC32 967 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 CREB3O43889 395 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 AKR1B10O60218 316 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 PRPF6O94906 941 aaKnown RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 ATP1A3P13637 1013 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 CMA1P23946 247 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 KLRK1P26718 216 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 FNTAP49354 379 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 AMPD3Q01432 767 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 DDR1Q08345 913 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 SLC39A14Q15043 492 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 BEND6Q5SZJ8 279 aaPredicted RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 EFCAB13Q8IY85 973 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 SPICE1Q8N0Z3 855 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 SMARCC2Q8TAQ2 1214 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 RNF217Q8TC41 542 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 EPSTI1Q96J88 318 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 TSG101Q99816 390 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 DESI2Q9BSY9 194 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 SRRTQ9BXP5 876 aaKnown RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 CENPHQ9H3R5 247 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 LAMB2P55268 1798 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 SMCO2A6NFE2 343 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 SPDYE3A6NKU9 549 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 SCG2P13521 617 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 SLC16A2P36021 539 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 USP8P40818 1118 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 PRKG1Q13976 671 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 TMCO3Q6UWJ1 677 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 GPR161Q8N6U8 529 aaKnown RBP5.28□□□□□ -1.56
SEC24D-214ENST00000514561 IGSF22Q8N9C0 903 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 SYMPKQ92797 1274 aaKnown RBP5.28□□□□□ -1.56
SEC24D-214ENST00000514561 FAM84BQ96KN1 310 aaPredicted RBP5.28□□□□□ -1.56
SEC24D-214ENST00000514561 BSDC1Q9NW68 430 aaPredicted RBP5.28□□□□□ -1.56
SEC24D-214ENST00000514561 MCM8Q9UJA3 840 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 GUCA1BQ9UMX6 200 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 MRFAP1Q9Y605 127 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 UTYO14607 1347 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 C5P01031 1676 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 PXDNLA1KZ92 1463 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 PPP1R12AO14974 1030 aaPredicted RBP5.28□□□□□ -1.56
SEC24D-214ENST00000514561 CAMTA2O94983 1202 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 IFNAR1P17181 557 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 TECP42680 631 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 ETF1P62495 437 aaKnown RBP5.28□□□□□ -1.56
SEC24D-214ENST00000514561 TADA2BQ86TJ2 420 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 LINC00116Q8NCU8 138 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 MSANTD4Q8NCY6 345 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 BAG1Q99933 345 aaPredicted RBP5.28□□□□□ -1.56
SEC24D-214ENST00000514561 BPIFA3Q9BQP9 254 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 JADE2Q9NQC1 790 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 RMND1Q9NWS8 449 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 PUF60Q9UHX1 559 aaKnown RBP5.28□□□□□ -1.56
SEC24D-214ENST00000514561 KLF15Q9UIH9 416 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 SYNRGQ9UMZ2 1314 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 CLRN2A0PK11 232 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 FAM205CA6NFA0 338 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 H0YIN7 160 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 RPS6KA4O75676 772 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 CSF1RP07333 972 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 AARSP49588 968 aaKnown RBP eCLIP5.28□□□□□ -1.562e-8■■■■■ 46.4
SEC24D-214ENST00000514561 ANTXR2P58335 489 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 MFSD10Q14728 455 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 NFIXQ14938 502 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 MAEAQ7L5Y9 396 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 CPXCR1Q8N123 301 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 REXO1Q8N1G1 1221 aaKnown RBP5.28□□□□□ -1.56
SEC24D-214ENST00000514561 PRPF38AQ8NAV1 312 aaKnown RBP5.28□□□□□ -1.56
SEC24D-214ENST00000514561 ENGASEQ8NFI3 743 aa5.28□□□□□ -1.56
SEC24D-214ENST00000514561 SH3RF3Q8TEJ3 882 aaPredicted RBP5.28□□□□□ -1.56
SEC24D-214ENST00000514561 SLC4A9Q96Q91 983 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms