RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 KRT31Q15323 416 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 KMT5BQ4FZB7 885 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 DACT2Q5SW24 774 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 GPATCH4Q5T3I0 446 aaKnown RBP9.23□□□□□ -0.93
CPNE4-211ENST00000514439 TTBK2Q6IQ55 1244 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 PPP1R18Q6NYC8 613 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 SYT10Q6XYQ8 523 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 CUEDC2Q9H467 287 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 MAPK8IP1Q9UQF2 711 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 DDTLA6NHG4 134 aaPredicted RBP9.23□□□□□ -0.93
CPNE4-211ENST00000514439 CHRNA5P30532 468 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 SLC16A2P36021 539 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 CCT6AP40227 531 aaKnown RBP9.23□□□□□ -0.93
CPNE4-211ENST00000514439 TECP42680 631 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 RBM5P52756 815 aaKnown RBP eCLIP9.23□□□□□ -0.93
CPNE4-211ENST00000514439 FKBP1AP62942 108 aaKnown RBP9.23□□□□□ -0.93
CPNE4-211ENST00000514439 NCBP1Q09161 790 aaKnown RBP9.23□□□□□ -0.93
CPNE4-211ENST00000514439 FILIP1LQ4L180 1135 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 KCTD1Q719H9 257 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 REXO1L1PQ8IX06 675 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 ADSSL1Q8N142 457 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 IGSF22Q8N9C0 903 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 CCDC17Q96LX7 622 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 MRIQ9BWK5 157 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 GREB1LQ9C091 1923 aaPredicted RBP9.23□□□□□ -0.93
CPNE4-211ENST00000514439 DHX36Q9H2U1 1008 aaKnown RBP9.23□□□□□ -0.93
CPNE4-211ENST00000514439 MAGEF1Q9HAY2 307 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 FAM198AQ9UFP1 575 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 AKR1B15C9JRZ8 316 aaPredicted RBP9.22□□□□□ -0.93
CPNE4-211ENST00000514439 SLC37A4O43826 429 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 EDIL3O43854 480 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 RHOBTB3O94955 611 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 TDP2O95551 362 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 HDLBPQ00341 1268 aaKnown RBP9.22□□□□□ -0.93
CPNE4-211ENST00000514439 SPAG1Q07617 926 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 SYCP1Q15431 976 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 UBE2SQ16763 222 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 SHROOM1Q2M3G4 852 aaPredicted RBP9.22□□□□□ -0.93
CPNE4-211ENST00000514439 ANKRD7Q92527 254 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 MTMR9Q96QG7 549 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 MMTAG2Q9BU76 263 aaKnown RBP9.22□□□□□ -0.93
CPNE4-211ENST00000514439 IDI2Q9BXS1 227 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 RIC8AQ9NPQ8 531 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 LIMA1Q9UHB6 759 aaKnown RBP9.22□□□□□ -0.93
CPNE4-211ENST00000514439 PPP2R2CQ9Y2T4 447 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 SCN9AQ15858 1988 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 SLX4Q8IY92 1834 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 TRIM49BA6NDI0 452 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 LRRC10BA6NIK2 292 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 KCNJ18B7U540 433 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 USP17L10C9JJH3 530 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 ZBTB5O15062 677 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 ZSCAN12O43309 604 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 TUBB4AP04350 444 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 TXKP42681 527 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 TNNI2P48788 182 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 ETF1P62495 437 aaKnown RBP9.22□□□□□ -0.93
CPNE4-211ENST00000514439 RBL2Q08999 1139 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 KCNJ12Q14500 433 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 CALCRLQ16602 461 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 AOC3Q16853 763 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 TCP11X2Q5H9J9 407 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 PPP4R3BQ5MIZ7 849 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 TOGARAM2Q6ZUX3 1019 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 SH3BP5LQ7L8J4 393 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 PPFIBP1Q86W92 1011 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 GIMAP8Q8ND71 665 aaPredicted RBP9.22□□□□□ -0.93
CPNE4-211ENST00000514439 MTMR8Q96EF0 704 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 PANX2Q96RD6 677 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 TRIM9Q9C026 710 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 TAB2Q9NYJ8 693 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 ZNF215Q9UL58 517 aaPredicted RBP9.22□□□□□ -0.93
CPNE4-211ENST00000514439 SIPA1L1O43166 1804 aa9.22□□□□□ -0.93
CPNE4-211ENST00000514439 N4BP3O15049 544 aa9.21□□□□□ -0.93
CPNE4-211ENST00000514439 CLK2P49760 499 aaKnown RBP9.21□□□□□ -0.93
CPNE4-211ENST00000514439 COPB1P53618 953 aaKnown RBP9.21□□□□□ -0.93
CPNE4-211ENST00000514439 PMS1P54277 932 aaKnown RBP9.21□□□□□ -0.93
CPNE4-211ENST00000514439 SEMA3FQ13275 785 aa9.21□□□□□ -0.93
CPNE4-211ENST00000514439 NAA30Q147X3 362 aaPredicted RBP9.21□□□□□ -0.93
CPNE4-211ENST00000514439 CERKLQ49MI3 558 aaPredicted RBP9.21□□□□□ -0.93
CPNE4-211ENST00000514439 TRIM65Q6PJ69 517 aa9.21□□□□□ -0.93
CPNE4-211ENST00000514439 ZSCAN29Q8IWY8 852 aaPredicted RBP9.21□□□□□ -0.93
CPNE4-211ENST00000514439 CNKSR1Q969H4 720 aa9.21□□□□□ -0.93
CPNE4-211ENST00000514439 VPS16Q9H269 839 aa9.21□□□□□ -0.93
CPNE4-211ENST00000514439 PI4KBQ9UBF8 816 aa9.21□□□□□ -0.93
CPNE4-211ENST00000514439 ITIH6Q6UXX5 1313 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 H7C1D1 291 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 MFAP3LO75121 409 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 GYPCP04921 128 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 EEF2P13639 858 aaKnown RBP9.21□□□□□ -0.94
CPNE4-211ENST00000514439 FXR2P51116 673 aaKnown RBP eCLIP9.21□□□□□ -0.94
CPNE4-211ENST00000514439 GRB10Q13322 594 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 STIM1Q13586 685 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 IRF2BP1Q8IU81 584 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 ANKRD20A12PQ8NF67 263 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 CPLX3Q8WVH0 158 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 C7orf43Q8WVR3 580 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 CUL5Q93034 780 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 CALML4Q96GE6 196 aa9.21□□□□□ -0.94
CPNE4-211ENST00000514439 C7orf25Q9BPX7 421 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms