RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 TRIM6-TRIM34B2RNG4 842 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 PTGS1P23219 599 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 HAND2P61296 217 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 NKX3-2P78367 333 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 SMAD3P84022 425 aaKnown RBP14.42□□□□□ -0.1
SNHG4-208ENST00000514110 BEX3Q00994 111 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 TNFAIP2Q03169 654 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 FPGSQ05932 587 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 RNPC3Q96LT9 517 aaKnown RBP14.42□□□□□ -0.1
SNHG4-208ENST00000514110 PURBQ96QR8 312 aaKnown RBP14.42□□□□□ -0.1
SNHG4-208ENST00000514110 TMEM47Q9BQJ4 181 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 RANBP17Q9H2T7 1088 aaKnown RBP14.42□□□□□ -0.1
SNHG4-208ENST00000514110 SEMA6BQ9H3T3 888 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 CYP39A1Q9NYL5 469 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 TBX21Q9UL17 535 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 CCPG1Q9ULG6 757 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 LCTP09848 1927 aa14.42□□□□□ -0.1
SNHG4-208ENST00000514110 ZMYM6O95789 1325 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 A0A0U1RQG5 324 aaPredicted RBP14.41□□□□□ -0.1
SNHG4-208ENST00000514110 ARVCFO00192 962 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 TIMP1P01033 207 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 ICAM1P05362 532 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 TOP1P11387 765 aaKnown RBP14.41□□□□□ -0.1
SNHG4-208ENST00000514110 TMEM63BQ5T3F8 832 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 BTNL9Q6UXG8 535 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 NSMFQ6X4W1 530 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 NOL8Q76FK4 1167 aaKnown RBP14.41□□□□□ -0.1
SNHG4-208ENST00000514110 TICAM2Q86XR7 235 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 RILPL2Q969X0 211 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
SNHG4-208ENST00000514110 TTYH1Q9H313 450 aaPredicted RBP14.41□□□□□ -0.1
SNHG4-208ENST00000514110 PDGFCQ9NRA1 345 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 TCP11L1Q9NUJ3 509 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 GNEQ9Y223 722 aaKnown RBP14.41□□□□□ -0.1
SNHG4-208ENST00000514110 MROH7Q68CQ1 1323 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 FRMPD2Q68DX3 1309 aaPredicted RBP14.41□□□□□ -0.1
SNHG4-208ENST00000514110 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
SNHG4-208ENST00000514110 SMPD1P17405 629 aa14.4□□□□□ -0.1
SNHG4-208ENST00000514110 SYDE2Q5VT97 1194 aa14.4□□□□□ -0.1
SNHG4-208ENST00000514110 B4GALNT3Q6L9W6 998 aa14.4□□□□□ -0.1
SNHG4-208ENST00000514110 TAPT1Q6NXT6 567 aa14.4□□□□□ -0.1
SNHG4-208ENST00000514110 EEPD1Q7L9B9 569 aa14.4□□□□□ -0.1
SNHG4-208ENST00000514110 TLK2Q86UE8 772 aa14.4□□□□□ -0.1
SNHG4-208ENST00000514110 TBC1D10CQ8IV04 446 aa14.4□□□□□ -0.1
SNHG4-208ENST00000514110 SMC5Q8IY18 1101 aa14.4□□□□□ -0.1
SNHG4-208ENST00000514110 GPCPD1Q9NPB8 672 aa14.4□□□□□ -0.1
SNHG4-208ENST00000514110 NFIBO00712 420 aa14.39□□□□□ -0.11
SNHG4-208ENST00000514110 IGHDP01880 384 aa14.39□□□□□ -0.11
SNHG4-208ENST00000514110 FSCN1Q16658 493 aaKnown RBP14.39□□□□□ -0.11
SNHG4-208ENST00000514110 AKNAD1Q5T1N1 836 aa14.39□□□□□ -0.11
SNHG4-208ENST00000514110 MFSD5Q6N075 450 aa14.39□□□□□ -0.11
SNHG4-208ENST00000514110 CXCL17Q6UXB2 119 aa14.39□□□□□ -0.11
SNHG4-208ENST00000514110 C16orf59Q7L2K0 433 aa14.39□□□□□ -0.11
SNHG4-208ENST00000514110 FBXO16Q8IX29 292 aaPredicted RBP14.39□□□□□ -0.11
SNHG4-208ENST00000514110 FAM126BQ8IXS8 530 aa14.39□□□□□ -0.11
SNHG4-208ENST00000514110 MORC4Q8TE76 937 aa14.39□□□□□ -0.11
SNHG4-208ENST00000514110 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.39□□□□□ -0.11
SNHG4-208ENST00000514110 CDH23Q9H251 3354 aa14.39□□□□□ -0.11
SNHG4-208ENST00000514110 DYNC1LI2O43237 492 aaPredicted RBP14.38□□□□□ -0.11
SNHG4-208ENST00000514110 PDHBP11177 359 aa14.38□□□□□ -0.11
SNHG4-208ENST00000514110 SDSP20132 328 aa14.38□□□□□ -0.11
SNHG4-208ENST00000514110 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
SNHG4-208ENST00000514110 IQSEC1Q6DN90 963 aa14.38□□□□□ -0.11
SNHG4-208ENST00000514110 MFSD6Q6ZSS7 791 aa14.38□□□□□ -0.11
SNHG4-208ENST00000514110 PLEKHM2Q8IWE5 1019 aa14.38□□□□□ -0.11
SNHG4-208ENST00000514110 SLC43A3Q8NBI5 491 aa14.38□□□□□ -0.11
SNHG4-208ENST00000514110 MYLIPQ8WY64 445 aa14.38□□□□□ -0.11
SNHG4-208ENST00000514110 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
SNHG4-208ENST00000514110 PPP1R12CQ9BZL4 782 aa14.38□□□□□ -0.11
SNHG4-208ENST00000514110 RWDD1Q9H446 243 aaPredicted RBP14.38□□□□□ -0.11
SNHG4-208ENST00000514110 NEDD4P46934 1319 aa14.38□□□□□ -0.11
SNHG4-208ENST00000514110 CD4P01730 458 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 SNHG28P0DPA3 235 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 CSF2RAP15509 400 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 ALDH5A1P51649 535 aaPredicted RBP14.37□□□□□ -0.11
SNHG4-208ENST00000514110 NUCB1Q02818 461 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 ZNF543Q08ER8 600 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 AAMPQ13685 434 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 CHD1LQ86WJ1 897 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 CLEC4DQ8WXI8 215 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 TTC14Q96N46 770 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 ZKSCAN3Q9BRR0 538 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 AP5M1Q9H0R1 490 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 VTA1Q9NP79 307 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 GRIN2DO15399 1336 aa14.37□□□□□ -0.11
SNHG4-208ENST00000514110 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.36□□□□□ -0.11
SNHG4-208ENST00000514110 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.36□□□□□ -0.11
SNHG4-208ENST00000514110 PTPDC1A2A3K4 754 aa14.36□□□□□ -0.11
SNHG4-208ENST00000514110 TLR3O15455 904 aaKnown RBP14.36□□□□□ -0.11
SNHG4-208ENST00000514110 CABYRO75952 493 aa14.36□□□□□ -0.11
SNHG4-208ENST00000514110 ACRP10323 421 aa14.36□□□□□ -0.11
SNHG4-208ENST00000514110 PCP11498 1178 aaKnown RBP14.36□□□□□ -0.11
SNHG4-208ENST00000514110 PPIGQ13427 754 aaKnown RBP eCLIP14.36□□□□□ -0.119e-10■□□□□ 10.7
SNHG4-208ENST00000514110 ITGA7Q13683 1181 aa14.36□□□□□ -0.11
SNHG4-208ENST00000514110 TMEM240Q5SV17 173 aa14.36□□□□□ -0.11
SNHG4-208ENST00000514110 SLC30A10Q6XR72 485 aa14.36□□□□□ -0.11
SNHG4-208ENST00000514110 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.36□□□□□ -0.118e-76■■■■□ 24.7
SNHG4-208ENST00000514110 EXOC6Q8TAG9 804 aa14.36□□□□□ -0.11
SNHG4-208ENST00000514110 OSBPL3Q9H4L5 887 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms