RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 TACC3Q9Y6A5 838 aa11.61□□□□□ -0.55
CCL28-203ENST00000513525 CCDC171Q6TFL3 1326 aa11.61□□□□□ -0.55
CCL28-203ENST00000513525 SYNGAP1Q96PV0 1343 aa11.61□□□□□ -0.55
CCL28-203ENST00000513525 TRIM6-TRIM34B2RNG4 842 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 KBTBD13C9JR72 458 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 FGAP02671 866 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 HSPD1P10809 573 aaKnown RBP11.6□□□□□ -0.55
CCL28-203ENST00000513525 NMIQ13287 307 aaPredicted RBP11.6□□□□□ -0.55
CCL28-203ENST00000513525 PRAMEF19Q5SWL8 479 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 DMRTA1Q5VZB9 504 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 MAMDC4Q6UXC1 1216 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 ZNF589Q86UQ0 364 aaPredicted RBP11.6□□□□□ -0.55
CCL28-203ENST00000513525 FAM160B2Q86V87 743 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 CPXCR1Q8N123 301 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 CHST13Q8NET6 341 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 CHURC1Q8WUH1 139 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 RAVER2Q9HCJ3 691 aaKnown RBP11.6□□□□□ -0.55
CCL28-203ENST00000513525 STX8Q9UNK0 236 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 CTDP1Q9Y5B0 961 aaPredicted RBP11.6□□□□□ -0.55
CCL28-203ENST00000513525 TMEM232C9JQI7 657 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 RANBP6O60518 1105 aaKnown RBP11.6□□□□□ -0.55
CCL28-203ENST00000513525 PCP11498 1178 aaKnown RBP11.6□□□□□ -0.55
CCL28-203ENST00000513525 SYN1P17600 705 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 SLC1A4P43007 532 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 MAGEA10P43363 369 aaPredicted RBP11.6□□□□□ -0.55
CCL28-203ENST00000513525 RBM25P49756 843 aaKnown RBP11.6□□□□□ -0.55
CCL28-203ENST00000513525 PSEN2P49810 448 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 MFAP1P55081 439 aaKnown RBP11.6□□□□□ -0.55
CCL28-203ENST00000513525 GJC2Q5T442 439 aaPredicted RBP11.6□□□□□ -0.55
CCL28-203ENST00000513525 ANO1Q5XXA6 986 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 PTCD2Q8WV60 388 aaKnown RBP11.6□□□□□ -0.55
CCL28-203ENST00000513525 STAG1Q8WVM7 1258 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 DDX11Q96FC9 970 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 INCENPQ9NQS7 918 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 TCP11L1Q9NUJ3 509 aa11.6□□□□□ -0.55
CCL28-203ENST00000513525 NMT2O60551 498 aa11.59□□□□□ -0.55
CCL28-203ENST00000513525 ZNF865P0CJ78 1059 aaPredicted RBP11.59□□□□□ -0.55
CCL28-203ENST00000513525 RARBP10826 455 aa11.59□□□□□ -0.55
CCL28-203ENST00000513525 AKR1A1P14550 325 aa11.59□□□□□ -0.55
CCL28-203ENST00000513525 GSPT1P15170 499 aaKnown RBP11.59□□□□□ -0.55
CCL28-203ENST00000513525 SNX17Q15036 470 aa11.59□□□□□ -0.55
CCL28-203ENST00000513525 LRRC41Q15345 812 aa11.59□□□□□ -0.55
CCL28-203ENST00000513525 RCSD1Q6JBY9 416 aa11.59□□□□□ -0.55
CCL28-203ENST00000513525 RILPL2Q969X0 211 aa11.59□□□□□ -0.55
CCL28-203ENST00000513525 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
CCL28-203ENST00000513525 ZNF536O15090 1300 aa11.59□□□□□ -0.55
CCL28-203ENST00000513525 TAL1P17542 331 aaPredicted RBP11.58□□□□□ -0.56
CCL28-203ENST00000513525 SDSP20132 328 aa11.58□□□□□ -0.56
CCL28-203ENST00000513525 MCCP23508 829 aa11.58□□□□□ -0.56
CCL28-203ENST00000513525 TKFCQ3LXA3 575 aa11.58□□□□□ -0.56
CCL28-203ENST00000513525 C1orf53Q5VUE5 145 aa11.58□□□□□ -0.56
CCL28-203ENST00000513525 CASC1Q6TDU7 716 aa11.58□□□□□ -0.56
CCL28-203ENST00000513525 SLC39A5Q6ZMH5 540 aa11.58□□□□□ -0.56
CCL28-203ENST00000513525 ANKRD35Q8N283 1001 aa11.58□□□□□ -0.56
CCL28-203ENST00000513525 DCAF4Q8WV16 495 aa11.58□□□□□ -0.56
CCL28-203ENST00000513525 XPNPEP3Q9NQH7 507 aa11.58□□□□□ -0.56
CCL28-203ENST00000513525 PHF24Q9UPV7 400 aa11.58□□□□□ -0.56
CCL28-203ENST00000513525 KIAA1217Q5T5P2 1943 aa11.58□□□□□ -0.56
CCL28-203ENST00000513525 LAMA2P24043 3122 aaKnown RBP11.57□□□□□ -0.56
CCL28-203ENST00000513525 SNAI1O95863 264 aaPredicted RBP11.57□□□□□ -0.56
CCL28-203ENST00000513525 NT5C2P49902 561 aa11.57□□□□□ -0.56
CCL28-203ENST00000513525 RTP1P59025 263 aa11.57□□□□□ -0.56
CCL28-203ENST00000513525 IKQ13123 557 aaPredicted RBP11.57□□□□□ -0.56
CCL28-203ENST00000513525 KCTD1Q719H9 257 aa11.57□□□□□ -0.56
CCL28-203ENST00000513525 RNF180Q86T96 592 aa11.57□□□□□ -0.56
CCL28-203ENST00000513525 TDHQ8IZJ6 230 aa11.57□□□□□ -0.56
CCL28-203ENST00000513525 FGD4Q96M96 766 aa11.57□□□□□ -0.56
CCL28-203ENST00000513525 ACAD9Q9H845 621 aa11.57□□□□□ -0.56
CCL28-203ENST00000513525 TOMM22Q9NS69 142 aa11.57□□□□□ -0.56
CCL28-203ENST00000513525 HIP1O00291 1037 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 SOX1O00570 391 aaPredicted RBP11.56□□□□□ -0.56
CCL28-203ENST00000513525 ADAMTS4O75173 837 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 TOP1P11387 765 aaKnown RBP11.56□□□□□ -0.56
CCL28-203ENST00000513525 ADCYAP1R1P41586 468 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 SLC4A3P48751 1232 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 LRIT3Q3SXY7 679 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 AKNAD1Q5T1N1 836 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 BTNL9Q6UXG8 535 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 RASGRP2Q7LDG7 609 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 FAM133AQ8N9E0 248 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 TTC14Q96N46 770 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 ABHD16BQ9H3Z7 469 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 RNF41Q9H4P4 317 aaPredicted RBP11.56□□□□□ -0.56
CCL28-203ENST00000513525 RNF146Q9NTX7 359 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 FAM184BQ9ULE4 1060 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 PRR12Q9ULL5 1215 aa11.56□□□□□ -0.56
CCL28-203ENST00000513525 ISY1Q9ULR0 285 aaKnown RBP11.56□□□□□ -0.56
CCL28-203ENST00000513525 HAND2P61296 217 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 RRP12Q5JTH9 1297 aaKnown RBP11.55□□□□□ -0.56
CCL28-203ENST00000513525 MFSD6Q6ZSS7 791 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 TBC1D10CQ8IV04 446 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 AGBL1Q96MI9 1066 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 TMEM47Q9BQJ4 181 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 TSEN34Q9BSV6 310 aaKnown RBP11.55□□□□□ -0.56
CCL28-203ENST00000513525 UBE2OQ9C0C9 1292 aaKnown RBP11.55□□□□□ -0.56
CCL28-203ENST00000513525 RANBP17Q9H2T7 1088 aaKnown RBP11.55□□□□□ -0.56
CCL28-203ENST00000513525 A1CFQ9NQ94 594 aaKnown RBP11.55□□□□□ -0.56
CCL28-203ENST00000513525 HOMER2Q9NSB8 354 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.55□□□□□ -0.56
CCL28-203ENST00000513525 ATP11BQ9Y2G3 1177 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms