RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 LCHNA4D1U4 455 aa13.47□□□□□ -0.25
RNF4-218ENST00000513284 TTF1Q15361 905 aaPredicted RBP13.47□□□□□ -0.25
RNF4-218ENST00000513284 CTR9Q6PD62 1173 aa13.47□□□□□ -0.25
RNF4-218ENST00000513284 NOL8Q76FK4 1167 aaKnown RBP13.47□□□□□ -0.25
RNF4-218ENST00000513284 AACSQ86V21 672 aa13.47□□□□□ -0.25
RNF4-218ENST00000513284 CHST13Q8NET6 341 aa13.47□□□□□ -0.25
RNF4-218ENST00000513284 FBXL18Q96ME1 805 aa13.47□□□□□ -0.25
RNF4-218ENST00000513284 SEZ6LQ9BYH1 1024 aa13.47□□□□□ -0.25
RNF4-218ENST00000513284 TET1Q8NFU7 2136 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 POTEB3A0JP26 581 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 GOLIM4O00461 696 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.25
RNF4-218ENST00000513284 ZBED4O75132 1171 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 MBD4O95243 580 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 PFKMP08237 780 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 GPNMBQ14956 572 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 IQSEC1Q6DN90 963 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 POTEBQ6S5H4 581 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 TMCO2Q7Z6W1 182 aaPredicted RBP13.46□□□□□ -0.25
RNF4-218ENST00000513284 PPP1R13LQ8WUF5 828 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 FRAT1Q92837 279 aaPredicted RBP13.46□□□□□ -0.25
RNF4-218ENST00000513284 KIFC2Q96AC6 838 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 SLC9A7Q96T83 725 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 AP5M1Q9H0R1 490 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 NYAP2Q9P242 653 aa13.46□□□□□ -0.25
RNF4-218ENST00000513284 ZBED9Q6R2W3 1325 aa13.45□□□□□ -0.26
RNF4-218ENST00000513284 IQCF3P0C7M6 154 aa13.45□□□□□ -0.26
RNF4-218ENST00000513284 IL9P15248 144 aa13.45□□□□□ -0.26
RNF4-218ENST00000513284 ADD2P35612 726 aa13.45□□□□□ -0.26
RNF4-218ENST00000513284 PURBQ96QR8 312 aaKnown RBP13.45□□□□□ -0.26
RNF4-218ENST00000513284 UBE2ZQ9H832 354 aaPredicted RBP13.45□□□□□ -0.26
RNF4-218ENST00000513284 SUGCTQ9HAC7 445 aa13.45□□□□□ -0.26
RNF4-218ENST00000513284 IL1RAPL2Q9NP60 686 aa13.45□□□□□ -0.26
RNF4-218ENST00000513284 A1CFQ9NQ94 594 aaKnown RBP13.45□□□□□ -0.26
RNF4-218ENST00000513284 LMCD1Q9NZU5 365 aa13.45□□□□□ -0.26
RNF4-218ENST00000513284 EXOC6BQ9Y2D4 811 aa13.45□□□□□ -0.26
RNF4-218ENST00000513284 Q9Y3F1 56 aa13.45□□□□□ -0.26
RNF4-218ENST00000513284 PTPRSQ13332 1948 aa13.45□□□□□ -0.26
RNF4-218ENST00000513284 GREB1LQ9C091 1923 aaPredicted RBP13.45□□□□□ -0.26
RNF4-218ENST00000513284 USP34Q70CQ2 3546 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 ZNF536O15090 1300 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 TNKSO95271 1327 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 IGKV6D-41A0A0C4DH26 115 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 RASA1P20936 1047 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 LEXMQ3ZCV2 418 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 EEPD1Q7L9B9 569 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 MKL1Q969V6 931 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 UIMC1Q96RL1 719 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 PHOX2BQ99453 314 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 HOMER2Q9NSB8 354 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 CLIP2Q9UDT6 1046 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 FBXO40Q9UH90 709 aa13.44□□□□□ -0.26
RNF4-218ENST00000513284 ZEB2O60315 1214 aa13.43□□□□□ -0.26
RNF4-218ENST00000513284 SUPT20HL2P0C7V6 817 aa13.43□□□□□ -0.26
RNF4-218ENST00000513284 OAZ1P54368 228 aa13.43□□□□□ -0.26
RNF4-218ENST00000513284 PURAQ00577 322 aaKnown RBP13.43□□□□□ -0.26
RNF4-218ENST00000513284 TCTN1Q2MV58 587 aa13.43□□□□□ -0.26
RNF4-218ENST00000513284 FBXO16Q8IX29 292 aaPredicted RBP13.43□□□□□ -0.26
RNF4-218ENST00000513284 GDPD5Q8WTR4 605 aa13.43□□□□□ -0.26
RNF4-218ENST00000513284 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.43□□□□□ -0.26
RNF4-218ENST00000513284 DNAJC2Q99543 621 aaKnown RBP13.43□□□□□ -0.26
RNF4-218ENST00000513284 C5orf42Q9H799 3197 aa13.42□□□□□ -0.26
RNF4-218ENST00000513284 GRXCR2A6NFK2 248 aa13.42□□□□□ -0.26
RNF4-218ENST00000513284 ASB14A6NK59 587 aa13.42□□□□□ -0.26
RNF4-218ENST00000513284 KIF28PB7ZC32 967 aa13.42□□□□□ -0.26
RNF4-218ENST00000513284 ACTN1P12814 892 aa13.42□□□□□ -0.26
RNF4-218ENST00000513284 RFC2P35250 354 aa13.42□□□□□ -0.26
RNF4-218ENST00000513284 STK11IPQ8N1F8 1099 aa13.42□□□□□ -0.26
RNF4-218ENST00000513284 MORC4Q8TE76 937 aa13.42□□□□□ -0.26
RNF4-218ENST00000513284 FEM1BQ9UK73 627 aa13.42□□□□□ -0.26
RNF4-218ENST00000513284 COL4A4P53420 1690 aaPredicted RBP13.42□□□□□ -0.26
RNF4-218ENST00000513284 CCER2I3L3R5 266 aa13.41□□□□□ -0.26
RNF4-218ENST00000513284 ALADP13716 330 aa13.41□□□□□ -0.26
RNF4-218ENST00000513284 KCNA5P22460 613 aa13.41□□□□□ -0.26
RNF4-218ENST00000513284 ERVK-21P61565 698 aa13.41□□□□□ -0.26
RNF4-218ENST00000513284 NBPF20Q3BBV1 942 aa13.41□□□□□ -0.26
RNF4-218ENST00000513284 DUSP28Q4G0W2 176 aa13.41□□□□□ -0.26
RNF4-218ENST00000513284 CEP85Q6P2H3 762 aa13.41□□□□□ -0.26
RNF4-218ENST00000513284 KIAA1211Q6ZU35 1233 aa13.41□□□□□ -0.26
RNF4-218ENST00000513284 CTAGE1Q96RT6 745 aa13.41□□□□□ -0.26
RNF4-218ENST00000513284 FTOQ9C0B1 505 aaKnown RBP eCLIP13.41□□□□□ -0.26
RNF4-218ENST00000513284 PUS7LQ9H0K6 701 aaKnown RBP13.41□□□□□ -0.26
RNF4-218ENST00000513284 ACAD9Q9H845 621 aa13.41□□□□□ -0.26
RNF4-218ENST00000513284 SLC4A4Q9Y6R1 1079 aa13.41□□□□□ -0.26
RNF4-218ENST00000513284 CFAP54Q96N23 3096 aa13.41□□□□□ -0.26
RNF4-218ENST00000513284 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
RNF4-218ENST00000513284 RLBP1P12271 317 aa13.4□□□□□ -0.26
RNF4-218ENST00000513284 SSTR3P32745 418 aaPredicted RBP13.4□□□□□ -0.26
RNF4-218ENST00000513284 WDR5P61964 334 aaKnown RBP13.4□□□□□ -0.26
RNF4-218ENST00000513284 DEFB103AP81534 67 aa13.4□□□□□ -0.26
RNF4-218ENST00000513284 MUM1L1Q5H9M0 696 aa13.4□□□□□ -0.26
RNF4-218ENST00000513284 PTCRAQ6ISU1 281 aaPredicted RBP13.4□□□□□ -0.26
RNF4-218ENST00000513284 RHPN1Q8TCX5 695 aa13.4□□□□□ -0.26
RNF4-218ENST00000513284 TRERF1Q96PN7 1200 aa13.4□□□□□ -0.26
RNF4-218ENST00000513284 KCNH6Q9H252 994 aa13.4□□□□□ -0.26
RNF4-218ENST00000513284 RNF146Q9NTX7 359 aa13.4□□□□□ -0.26
RNF4-218ENST00000513284 CYP39A1Q9NYL5 469 aa13.4□□□□□ -0.26
RNF4-218ENST00000513284 COG6Q9Y2V7 657 aa13.4□□□□□ -0.26
RNF4-218ENST00000513284 CTDP1Q9Y5B0 961 aaPredicted RBP13.4□□□□□ -0.26
RNF4-218ENST00000513284 LINC01553A4QN01 128 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms