RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 TTF2Q9UNY4 1162 aaKnown RBP8.58□□□□□ -1.04
RFC1-215ENST00000512881 EYA2O00167 538 aa8.57□□□□□ -1.04
RFC1-215ENST00000512881 MMP20O60882 483 aa8.57□□□□□ -1.04
RFC1-215ENST00000512881 FRAT2O75474 233 aaPredicted RBP8.57□□□□□ -1.04
RFC1-215ENST00000512881 TM4SF4P48230 202 aa8.57□□□□□ -1.04
RFC1-215ENST00000512881 RFX5P48382 616 aaPredicted RBP8.57□□□□□ -1.04
RFC1-215ENST00000512881 RAC1P63000 192 aa8.57□□□□□ -1.04
RFC1-215ENST00000512881 CHAF1AQ13111 956 aaPredicted RBP8.57□□□□□ -1.04
RFC1-215ENST00000512881 RASA3Q14644 834 aa8.57□□□□□ -1.04
RFC1-215ENST00000512881 ELMSAN1Q6PJG2 1045 aa8.57□□□□□ -1.04
RFC1-215ENST00000512881 DMRTC2Q8IXT2 367 aaPredicted RBP8.57□□□□□ -1.04
RFC1-215ENST00000512881 DZIP1LQ8IYY4 767 aaKnown RBP8.57□□□□□ -1.04
RFC1-215ENST00000512881 API5Q9BZZ5 524 aaKnown RBP8.57□□□□□ -1.04
RFC1-215ENST00000512881 ZNF70Q9UC06 446 aaPredicted RBP8.57□□□□□ -1.04
RFC1-215ENST00000512881 FZD1Q9UP38 647 aa8.57□□□□□ -1.04
RFC1-215ENST00000512881 PPP2R3BQ9Y5P8 575 aa8.57□□□□□ -1.04
RFC1-215ENST00000512881 TBC1D8O95759 1140 aa8.56□□□□□ -1.04
RFC1-215ENST00000512881 IFIT1P09914 478 aaKnown RBP8.56□□□□□ -1.04
RFC1-215ENST00000512881 UBTFL1P0CB47 393 aaPredicted RBP8.56□□□□□ -1.04
RFC1-215ENST00000512881 EIF2AK2P19525 551 aaKnown RBP8.56□□□□□ -1.04
RFC1-215ENST00000512881 FGFR2P21802 821 aa8.56□□□□□ -1.04
RFC1-215ENST00000512881 SOX18P35713 384 aa8.56□□□□□ -1.04
RFC1-215ENST00000512881 CRKP46108 304 aa8.56□□□□□ -1.04
RFC1-215ENST00000512881 RARSP54136 660 aaKnown RBP8.56□□□□□ -1.04
RFC1-215ENST00000512881 ADGRE1Q14246 886 aa8.56□□□□□ -1.04
RFC1-215ENST00000512881 MBTPS1Q14703 1052 aa8.56□□□□□ -1.04
RFC1-215ENST00000512881 PUM3Q15397 648 aaKnown RBP8.56□□□□□ -1.04
RFC1-215ENST00000512881 MAP3K11Q16584 847 aa8.56□□□□□ -1.04
RFC1-215ENST00000512881 RSPO4Q2I0M5 234 aaPredicted RBP8.56□□□□□ -1.04
RFC1-215ENST00000512881 NBPF12Q5TAG4 269 aaPredicted RBP8.56□□□□□ -1.04
RFC1-215ENST00000512881 SHISA2Q6UWI4 295 aa8.56□□□□□ -1.04
RFC1-215ENST00000512881 HFE2Q6ZVN8 426 aa8.56□□□□□ -1.04
RFC1-215ENST00000512881 CCDC82Q8N4S0 544 aa8.56□□□□□ -1.04
RFC1-215ENST00000512881 TBC1D22AQ8WUA7 517 aa8.56□□□□□ -1.04
RFC1-215ENST00000512881 TTC9Q92623 222 aa8.56□□□□□ -1.04
RFC1-215ENST00000512881 SMG9Q9H0W8 520 aaKnown RBP8.56□□□□□ -1.04
RFC1-215ENST00000512881 TDRD3Q9H7E2 651 aaKnown RBP8.56□□□□□ -1.04
RFC1-215ENST00000512881 POLR2AP24928 1970 aaKnown RBP8.55□□□□□ -1.04
RFC1-215ENST00000512881 MYH3P11055 1940 aa8.55□□□□□ -1.04
RFC1-215ENST00000512881 UNCXA6NJT0 531 aa8.55□□□□□ -1.04
RFC1-215ENST00000512881 USP2O75604 605 aaPredicted RBP8.55□□□□□ -1.04
RFC1-215ENST00000512881 ARID4AP29374 1257 aaPredicted RBP8.55□□□□□ -1.04
RFC1-215ENST00000512881 ZAP70P43403 619 aa8.55□□□□□ -1.04
RFC1-215ENST00000512881 HDLBPQ00341 1268 aaKnown RBP8.55□□□□□ -1.04
RFC1-215ENST00000512881 SREBF2Q12772 1141 aa8.55□□□□□ -1.04
RFC1-215ENST00000512881 NKAPLQ5M9Q1 402 aa8.55□□□□□ -1.04
RFC1-215ENST00000512881 ATG9AQ7Z3C6 839 aa8.55□□□□□ -1.04
RFC1-215ENST00000512881 LPIN2Q92539 896 aa8.55□□□□□ -1.04
RFC1-215ENST00000512881 CLMNQ96JQ2 1002 aa8.55□□□□□ -1.04
RFC1-215ENST00000512881 NSUN5Q96P11 429 aaKnown RBP8.55□□□□□ -1.04
RFC1-215ENST00000512881 MRIQ9BWK5 157 aa8.55□□□□□ -1.04
RFC1-215ENST00000512881 C1orf115Q9H7X2 142 aa8.55□□□□□ -1.04
RFC1-215ENST00000512881 HDAC5Q9UQL6 1122 aa8.55□□□□□ -1.04
RFC1-215ENST00000512881 CACNA1FO60840 1977 aa8.55□□□□□ -1.04
RFC1-215ENST00000512881 KIF16BQ96L93 1317 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 PAPPA2Q9BXP8 1791 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 COL1A1P02452 1464 aaPredicted RBP8.54□□□□□ -1.04
RFC1-215ENST00000512881 TCP10L2B9ZVM9 353 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 C9orf172C9J069 976 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 SLC5A1P13866 664 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 IREB2P48200 963 aaKnown RBP8.54□□□□□ -1.04
RFC1-215ENST00000512881 INHBEP58166 350 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 TNFAIP1Q13829 316 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 CTU1Q7Z7A3 348 aaKnown RBP8.54□□□□□ -1.04
RFC1-215ENST00000512881 ARHGAP45Q92619 1136 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 TEKT1Q969V4 418 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 LENG1Q96BZ8 264 aaPredicted RBP8.54□□□□□ -1.04
RFC1-215ENST00000512881 WNK4Q96J92 1243 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 TEPSINQ96N21 525 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 SIL1Q9H173 461 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 R3HDMLQ9H3Y0 253 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 SEPT3Q9UH03 358 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 SUGT1Q9Y2Z0 365 aa8.54□□□□□ -1.04
RFC1-215ENST00000512881 LRRFIP2Q9Y608 721 aaKnown RBP8.54□□□□□ -1.04
RFC1-215ENST00000512881 SPEF2Q9C093 1822 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 MANSC4A6NHS7 340 aaPredicted RBP8.53□□□□□ -1.04
RFC1-215ENST00000512881 J3QW42 95 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 ZBTB39O15060 712 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 CIAO1O76071 339 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 PSAPP07602 524 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 ZBTB48P10074 688 aaPredicted RBP8.53□□□□□ -1.04
RFC1-215ENST00000512881 IL15P40933 162 aaPredicted RBP8.53□□□□□ -1.04
RFC1-215ENST00000512881 TNNI2P48788 182 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 RGS19P49795 217 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 INTS3Q68E01 1043 aaKnown RBP8.53□□□□□ -1.04
RFC1-215ENST00000512881 APOBEC3HQ6NTF7 200 aaKnown RBP8.53□□□□□ -1.04
RFC1-215ENST00000512881 WFDC8Q8IUA0 241 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 ANKRD13AQ8IZ07 590 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 DTWD1Q8N5C7 304 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 WDR66Q8TBY9 1149 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 ZNF296Q8WUU4 475 aaPredicted RBP8.53□□□□□ -1.04
RFC1-215ENST00000512881 PLD4Q96BZ4 506 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 ZDHHC15Q96MV8 337 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 MEIS3Q99687 375 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 TMEM39BQ9GZU3 492 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 STIM2Q9P246 746 aa8.53□□□□□ -1.04
RFC1-215ENST00000512881 PSME4Q14997 1843 aa8.52□□□□□ -1.04
RFC1-215ENST00000512881 IPO8O15397 1037 aaKnown RBP8.52□□□□□ -1.05
RFC1-215ENST00000512881 GNAI3P08754 354 aa8.52□□□□□ -1.05
RFC1-215ENST00000512881 CACNB3P54284 484 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms