RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 DDX50Q9BQ39 737 aaKnown RBP9.74□□□□□ -0.85
VCAN-208ENST00000512590 OSBPL10Q9BXB5 764 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 PLEKHH1Q9ULM0 1364 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 GTPBP10A4D1E9 387 aaKnown RBP9.74□□□□□ -0.85
VCAN-208ENST00000512590 ARIH2O95376 493 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 SKOR1P84550 965 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 RBM10P98175 930 aaKnown RBP9.74□□□□□ -0.85
VCAN-208ENST00000512590 KRT17Q04695 432 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 NSUN2Q08J23 767 aaKnown RBP eCLIP9.74□□□□□ -0.85
VCAN-208ENST00000512590 MAP7D3Q8IWC1 876 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 LRRC2Q9BYS8 371 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 METTL14Q9HCE5 456 aaKnown RBP9.74□□□□□ -0.85
VCAN-208ENST00000512590 LSM7Q9UK45 103 aaKnown RBP9.74□□□□□ -0.85
VCAN-208ENST00000512590 IPPQ9Y573 584 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 EMILIN1Q9Y6C2 1016 aa9.74□□□□□ -0.85
VCAN-208ENST00000512590 H7C0C1 242 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 ATP5OP48047 213 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 YWHAHQ04917 246 aaPredicted RBP9.73□□□□□ -0.85
VCAN-208ENST00000512590 ICA1Q05084 483 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 RAD51AP2Q09MP3 1159 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 POLA2Q14181 598 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 ABCB5Q2M3G0 1257 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 RWDD4Q6NW29 188 aaKnown RBP9.73□□□□□ -0.85
VCAN-208ENST00000512590 CATSPER4Q7RTX7 472 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 FAM71BQ8TC56 605 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 FAM83GA6ND36 823 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 TEX28O15482 410 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 KDM1AO60341 852 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 RAD17O75943 681 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 KARSQ15046 597 aaKnown RBP9.73□□□□□ -0.85
VCAN-208ENST00000512590 C10orf67Q8IYJ2 551 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 DDX17Q92841 729 aaKnown RBP9.73□□□□□ -0.85
VCAN-208ENST00000512590 LZTS2Q9BRK4 669 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 STX18Q9P2W9 335 aaKnown RBP9.73□□□□□ -0.85
VCAN-208ENST00000512590 NCOA2Q15596 1464 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 FRMD3A2A2Y4 597 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 CTAGE9A4FU28 777 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 DLATP10515 647 aaKnown RBP9.73□□□□□ -0.85
VCAN-208ENST00000512590 ACADMP11310 421 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 ITGA6P23229 1130 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 ARHGAP25P42331 645 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 SLC7A3Q8WY07 619 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 ARHGEF2Q92974 986 aaKnown RBP9.73□□□□□ -0.85
VCAN-208ENST00000512590 IFT43Q96FT9 208 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 VWA3AA6NCI4 1184 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 NEMFO60524 1076 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 ZNF853P0CG23 659 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 SRGAP2CP0DJJ0 459 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 MCTP2Q6DN12 878 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 TWF2Q6IBS0 349 aaKnown RBP9.73□□□□□ -0.85
VCAN-208ENST00000512590 OTUB1Q96FW1 271 aaPredicted RBP9.73□□□□□ -0.85
VCAN-208ENST00000512590 RMDN2Q96LZ7 410 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 MAD1L1Q9Y6D9 718 aa9.73□□□□□ -0.85
VCAN-208ENST00000512590 ESPNB1AK53 854 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 IKBKBO14920 756 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 SETSIPP0DME0 302 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 CYP2J2P51589 502 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 IQUBQ8NA54 791 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 APPL2Q8NEU8 664 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 PHKBQ93100 1093 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 NUDCD1Q96RS6 583 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 DONSONQ9NYP3 566 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 CFAP69A5D8W1 941 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 SART1O43290 800 aaKnown RBP9.72□□□□□ -0.85
VCAN-208ENST00000512590 ARL4AP40617 200 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 HADHAP40939 763 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 TAF1CQ15572 869 aaPredicted RBP9.72□□□□□ -0.85
VCAN-208ENST00000512590 ANO4Q32M45 955 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 ARSJQ5FYB0 599 aaPredicted RBP9.72□□□□□ -0.85
VCAN-208ENST00000512590 KRT25Q7Z3Z0 450 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 FBXO11Q86XK2 927 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 PCDHB8Q9UN66 801 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 BFSP1Q12934 665 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 SNW1Q13573 536 aaKnown RBP9.72□□□□□ -0.85
VCAN-208ENST00000512590 HIF1AQ16665 826 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 RFX6Q8HWS3 928 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 TTLL6Q8N841 843 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 P3H4Q92791 437 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 DRC3Q9H069 523 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 EFCC1Q9HA90 598 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 KLHL3Q9UH77 587 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 EXD1Q8NHP7 514 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 LZTFL1Q9NQ48 299 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 LRWD1Q9UFC0 647 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 ARHGAP10A1A4S6 786 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 ENC1O14682 589 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 CAND2O75155 1236 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 PYGBP11216 843 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 TRAPPC10P48553 1259 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 SLC10A5Q5PT55 438 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 TAGAPQ8N103 731 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 PPHLN1Q8NEY8 458 aaKnown RBP9.72□□□□□ -0.85
VCAN-208ENST00000512590 CXorf38Q8TB03 319 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 NUP58Q9BVL2 599 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 TRIM55Q9BYV6 548 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 ARMT1Q9H993 441 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 ENTPD7Q9NQZ7 604 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 STRIP2Q9ULQ0 834 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 RIPOR2Q9Y4F9 1068 aa9.72□□□□□ -0.85
VCAN-208ENST00000512590 NSD3Q9BZ95 1437 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms