RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 NOS2P35228 1153 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 RASA3Q14644 834 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 TEAD4Q15561 434 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 GIMAP6Q6P9H5 292 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 CDC37L1Q7L3B6 337 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 USP48Q86UV5 1035 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 TMEM151AQ8N4L1 468 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 TSEN2Q8NCE0 465 aaKnown RBP11.22□□□□□ -0.61
SNF8-211ENST00000512243 SMC1BQ8NDV3 1235 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 SCARF2Q96GP6 870 aaPredicted RBP11.22□□□□□ -0.61
SNF8-211ENST00000512243 GLIS2Q9BZE0 524 aaPredicted RBP11.22□□□□□ -0.61
SNF8-211ENST00000512243 TMEM39BQ9GZU3 492 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 NAPBQ9H115 298 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 OTOFQ9HC10 1997 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 DCP1AQ9NPI6 582 aaPredicted RBP11.22□□□□□ -0.61
SNF8-211ENST00000512243 SAP30BPQ9UHR5 308 aaKnown RBP11.22□□□□□ -0.61
SNF8-211ENST00000512243 HCN2Q9UL51 889 aa11.22□□□□□ -0.61
SNF8-211ENST00000512243 PAPPA2Q9BXP8 1791 aa11.21□□□□□ -0.61
SNF8-211ENST00000512243 ATRNL1Q5VV63 1379 aa11.21□□□□□ -0.61
SNF8-211ENST00000512243 ZMYM6O95789 1325 aa11.21□□□□□ -0.61
SNF8-211ENST00000512243 GSG1L2A8MUP6 293 aa11.21□□□□□ -0.61
SNF8-211ENST00000512243 PATL2C9JE40 543 aaKnown RBP11.21□□□□□ -0.61
SNF8-211ENST00000512243 KHNYNO15037 678 aaKnown RBP11.21□□□□□ -0.61
SNF8-211ENST00000512243 TOMM70O94826 608 aa11.21□□□□□ -0.61
SNF8-211ENST00000512243 POLR3DP05423 398 aaPredicted RBP11.21□□□□□ -0.61
SNF8-211ENST00000512243 HSPD1P10809 573 aaKnown RBP11.21□□□□□ -0.61
SNF8-211ENST00000512243 NF2P35240 595 aa11.21□□□□□ -0.61
SNF8-211ENST00000512243 C1orf229Q6ZS94 237 aaPredicted RBP11.21□□□□□ -0.61
SNF8-211ENST00000512243 KIAA1211Q6ZU35 1233 aa11.21□□□□□ -0.61
SNF8-211ENST00000512243 KCTD17Q8N5Z5 321 aa11.21□□□□□ -0.61
SNF8-211ENST00000512243 DSCC1Q9BVC3 393 aa11.21□□□□□ -0.61
SNF8-211ENST00000512243 PPP1R12CQ9BZL4 782 aa11.21□□□□□ -0.61
SNF8-211ENST00000512243 IL25Q9H293 177 aa11.21□□□□□ -0.61
SNF8-211ENST00000512243 EPB41L4AQ9HCS5 686 aaPredicted RBP11.21□□□□□ -0.61
SNF8-211ENST00000512243 MCM9Q9NXL9 1143 aa11.21□□□□□ -0.61
SNF8-211ENST00000512243 ARPP21Q9UBL0 812 aaPredicted RBP11.21□□□□□ -0.61
SNF8-211ENST00000512243 CNTNAP5Q8WYK1 1306 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 SHISA8B8ZZ34 492 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 EIF5BO60841 1220 aaKnown RBP11.2□□□□□ -0.62
SNF8-211ENST00000512243 MAPTP10636 758 aaKnown RBP11.2□□□□□ -0.62
SNF8-211ENST00000512243 CD33P20138 364 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 VPS53Q5VIR6 699 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 ZFPM1Q8IX07 1006 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 IFNL3Q8IZI9 196 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 SIX5Q8N196 739 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 HOOK2Q96ED9 719 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 CDCA5Q96FF9 252 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 CSRNP1Q96S65 589 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 DHX36Q9H2U1 1008 aaKnown RBP11.2□□□□□ -0.62
SNF8-211ENST00000512243 ANO2Q9NQ90 1003 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 RBM19Q9Y4C8 960 aaKnown RBP11.2□□□□□ -0.62
SNF8-211ENST00000512243 DOCK1Q14185 1865 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 SSC5DA1L4H1 1573 aa11.2□□□□□ -0.62
SNF8-211ENST00000512243 SERTM1A2A2V5 107 aa11.19□□□□□ -0.62
SNF8-211ENST00000512243 DDTLA6NHG4 134 aaPredicted RBP11.19□□□□□ -0.62
SNF8-211ENST00000512243 DKK1O94907 266 aa11.19□□□□□ -0.62
SNF8-211ENST00000512243 REC8O95072 547 aa11.19□□□□□ -0.62
SNF8-211ENST00000512243 TNP2Q05952 138 aa11.19□□□□□ -0.62
SNF8-211ENST00000512243 FSTL1Q12841 308 aa11.19□□□□□ -0.62
SNF8-211ENST00000512243 ALX1Q15699 326 aa11.19□□□□□ -0.62
SNF8-211ENST00000512243 SLC4A8Q2Y0W8 1093 aa11.19□□□□□ -0.62
SNF8-211ENST00000512243 SUPT20HL1Q3ZLR7 823 aa11.19□□□□□ -0.62
SNF8-211ENST00000512243 TTC6Q86TZ1 520 aa11.19□□□□□ -0.62
SNF8-211ENST00000512243 GALNT6Q8NCL4 622 aa11.19□□□□□ -0.62
SNF8-211ENST00000512243 TEPSINQ96N21 525 aa11.19□□□□□ -0.62
SNF8-211ENST00000512243 PALD1Q9ULE6 856 aa11.19□□□□□ -0.62
SNF8-211ENST00000512243 USP17L12C9JPN9 530 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 USP17L21D6R901 530 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 EML1O00423 815 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 TRAF5O00463 557 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 FOXP2O15409 715 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 PTH1RQ03431 593 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 SBK1Q52WX2 424 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 NBPF12Q5TAG4 269 aaPredicted RBP11.18□□□□□ -0.62
SNF8-211ENST00000512243 PRAMEF18Q5VWM3 479 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 DCAF15Q66K64 600 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 CTR9Q6PD62 1173 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 LRRC69Q6ZNQ3 347 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 CRACR2BQ8N4Y2 399 aaPredicted RBP11.18□□□□□ -0.62
SNF8-211ENST00000512243 LSG1Q9H089 658 aaKnown RBP11.18□□□□□ -0.62
SNF8-211ENST00000512243 ZNF408Q9H9D4 720 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 PI4KBQ9UBF8 816 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 CTNNA3Q9UI47 895 aa11.18□□□□□ -0.62
SNF8-211ENST00000512243 GDF2Q9UK05 429 aaPredicted RBP11.18□□□□□ -0.62
SNF8-211ENST00000512243 ROBO3Q96MS0 1386 aa11.17□□□□□ -0.62
SNF8-211ENST00000512243 MINDY4BA8MYZ0 360 aa11.17□□□□□ -0.62
SNF8-211ENST00000512243 FGAP02671 866 aa11.17□□□□□ -0.62
SNF8-211ENST00000512243 SLC3A2P08195 630 aaKnown RBP11.17□□□□□ -0.62
SNF8-211ENST00000512243 CYP2D6P10635 497 aa11.17□□□□□ -0.62
SNF8-211ENST00000512243 PSMA6P60900 246 aaKnown RBP11.17□□□□□ -0.62
SNF8-211ENST00000512243 C8orf34Q49A92 452 aa11.17□□□□□ -0.62
SNF8-211ENST00000512243 GOLGA6L1Q8N7Z2 621 aa11.17□□□□□ -0.62
SNF8-211ENST00000512243 EHD4Q9H223 541 aa11.17□□□□□ -0.62
SNF8-211ENST00000512243 HERC5Q9UII4 1024 aaKnown RBP11.17□□□□□ -0.62
SNF8-211ENST00000512243 PASKQ96RG2 1323 aa11.16□□□□□ -0.62
SNF8-211ENST00000512243 CYP2D7A0A087X1C5 515 aa11.16□□□□□ -0.62
SNF8-211ENST00000512243 PPP1R12BO60237 982 aaPredicted RBP11.16□□□□□ -0.62
SNF8-211ENST00000512243 LGR5O75473 907 aa11.16□□□□□ -0.62
SNF8-211ENST00000512243 CELF2O95319 508 aaKnown RBP11.16□□□□□ -0.62
SNF8-211ENST00000512243 PLCD1P51178 756 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms