RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 TEX13BQ9BXU2 312 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 IL25Q9H293 177 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 RAVER2Q9HCJ3 691 aaKnown RBP6.89□□□□□ -1.31
RNF4-217ENST00000511892 SLC5A4Q9NY91 659 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 STX8Q9UNK0 236 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 DIS3Q9Y2L1 958 aaKnown RBP6.89□□□□□ -1.31
RNF4-217ENST00000511892 ZNF536O15090 1300 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 MYH7BA7E2Y1 1941 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 KIAA1217Q5T5P2 1943 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 SEPT4O43236 478 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 MSCO60682 206 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 PLA2G6O60733 806 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 ZBED4O75132 1171 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 SNAI1O95863 264 aaPredicted RBP6.88□□□□□ -1.31
RNF4-217ENST00000511892 ZNF865P0CJ78 1059 aaPredicted RBP6.88□□□□□ -1.31
RNF4-217ENST00000511892 SLC1A4P43007 532 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 SLC4A3P48751 1232 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 STAT2P52630 851 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 OAZ1P54368 228 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 RRP12Q5JTH9 1297 aaKnown RBP6.88□□□□□ -1.31
RNF4-217ENST00000511892 AKNAD1Q5T1N1 836 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 GJC2Q5T442 439 aaPredicted RBP6.88□□□□□ -1.31
RNF4-217ENST00000511892 RCSD1Q6JBY9 416 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 CWC27Q6UX04 472 aaKnown RBP6.88□□□□□ -1.31
RNF4-217ENST00000511892 ZNF454Q8N9F8 522 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 STAG1Q8WVM7 1258 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 FGD4Q96M96 766 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 AGBL1Q96MI9 1066 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 TMEM47Q9BQJ4 181 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 SENP6Q9GZR1 1112 aaPredicted RBP6.88□□□□□ -1.31
RNF4-217ENST00000511892 TCP11L1Q9NUJ3 509 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 ZMYND8Q9ULU4 1186 aaPredicted RBP6.88□□□□□ -1.31
RNF4-217ENST00000511892 EYSQ5T1H1 3165 aa6.88□□□□□ -1.31
RNF4-217ENST00000511892 NEDD4P46934 1319 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 DNM1LO00429 736 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 FDX1P10109 184 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 TOP1P11387 765 aaKnown RBP6.87□□□□□ -1.31
RNF4-217ENST00000511892 GSPT1P15170 499 aaKnown RBP6.87□□□□□ -1.31
RNF4-217ENST00000511892 SYN1P17600 705 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 MFAP1P55081 439 aaKnown RBP6.87□□□□□ -1.31
RNF4-217ENST00000511892 SNAP25P60880 206 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 TTBK2Q6IQ55 1244 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 CCDC174Q6PII3 467 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 MAMDC4Q6UXC1 1216 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 MFSD6Q6ZSS7 791 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 FAM160B2Q86V87 743 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 MSL3Q8N5Y2 521 aaKnown RBP6.87□□□□□ -1.31
RNF4-217ENST00000511892 CHST13Q8NET6 341 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 CHURC1Q8WUH1 139 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 LENG1Q96BZ8 264 aaPredicted RBP6.87□□□□□ -1.31
RNF4-217ENST00000511892 GDF15Q99988 308 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 TOMM22Q9NS69 142 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 HOMER2Q9NSB8 354 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 NRBP1Q9UHY1 535 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 PRR12Q9ULL5 1215 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 MTMR7Q9Y216 660 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 VPS9D1Q9Y2B5 631 aa6.87□□□□□ -1.31
RNF4-217ENST00000511892 CTDP1Q9Y5B0 961 aaPredicted RBP6.87□□□□□ -1.31
RNF4-217ENST00000511892 SPTBN5Q9NRC6 3674 aaKnown RBP6.87□□□□□ -1.31
RNF4-217ENST00000511892 ASTN1O14525 1302 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 FRMPD2Q68DX3 1309 aaPredicted RBP6.86□□□□□ -1.31
RNF4-217ENST00000511892 SYNGAP1Q96PV0 1343 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 SOWAHBA6NEL2 793 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 HIP1O00291 1037 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 ZNF213O14771 459 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 ADCY6O43306 1168 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 PCP11498 1178 aaKnown RBP6.86□□□□□ -1.31
RNF4-217ENST00000511892 BMP8BP34820 402 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 SLC16A2P36021 539 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 CNTN2Q02246 1040 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 IKQ13123 557 aaPredicted RBP6.86□□□□□ -1.31
RNF4-217ENST00000511892 LRRC41Q15345 812 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 MUM1L1Q5H9M0 696 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 TTC22Q5TAA0 569 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 BTNL9Q6UXG8 535 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 SLC39A5Q6ZMH5 540 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 ANKRD35Q8N283 1001 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 FAM133AQ8N9E0 248 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 ARRDC4Q8NCT1 418 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 DCAF4Q8WV16 495 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 DDX11Q96FC9 970 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 TTC14Q96N46 770 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 TRERF1Q96PN7 1200 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 ZKSCAN3Q9BRR0 538 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 DSCC1Q9BVC3 393 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 KATNBL1Q9H079 304 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 RANBP17Q9H2T7 1088 aaKnown RBP6.86□□□□□ -1.31
RNF4-217ENST00000511892 A1CFQ9NQ94 594 aaKnown RBP6.86□□□□□ -1.31
RNF4-217ENST00000511892 DIAPH3Q9NSV4 1193 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 RNF146Q9NTX7 359 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 FBXO40Q9UH90 709 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 ISY1Q9ULR0 285 aaKnown RBP6.86□□□□□ -1.31
RNF4-217ENST00000511892 UNC80Q8N2C7 3258 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 A0A0C4DFX4 3053 aa6.86□□□□□ -1.31
RNF4-217ENST00000511892 A0A1W2PPC1 479 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 B4E1Z4 1266 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 SOX1O00570 391 aaPredicted RBP6.85□□□□□ -1.31
RNF4-217ENST00000511892 KDM4AO75164 1064 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 ADAMTS4O75173 837 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 PGK1P00558 417 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms