RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 PHKA1P46020 1223 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 MFSD5Q6N075 450 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 PDXDC1Q6P996 788 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 FBXO11Q86XK2 927 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 ELMOD1Q8N336 334 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 DDX1Q92499 740 aaKnown RBP3.28□□□□□ -1.88
CLOCK-209ENST00000511124 RAB34Q9BZG1 259 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 C6orf50Q9HD87 102 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 CLIP2Q9UDT6 1046 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 FBXL21Q9UKT6 434 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 PHF24Q9UPV7 400 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 TMX2Q9Y320 296 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 COL2A1P02458 1487 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-209ENST00000511124 AK9Q5TCS8 1911 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 SCN7AQ01118 1682 aa3.28□□□□□ -1.88
CLOCK-209ENST00000511124 MAFGO15525 162 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 XPOTO43592 962 aaKnown RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 MBD4O95243 580 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 HMGB1P09429 215 aaKnown RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 MTHFRP42898 656 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 ACVR2BQ13705 512 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 DIXDC1Q155Q3 683 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 FSCN1Q16658 493 aaKnown RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 KIAA1841Q6NSI8 718 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 APOBEC3HQ6NTF7 200 aaKnown RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 LBX2Q6XYB7 198 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 SLC39A5Q6ZMH5 540 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 RNF207Q6ZRF8 634 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 CDAN1Q8IWY9 1227 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 LRRC47Q8N1G4 583 aaKnown RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 CNNM3Q8NE01 707 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 GLG1Q92896 1179 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 CCDC47Q96A33 483 aaKnown RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 FERMT2Q96AC1 680 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 ZBED3Q96IU2 234 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 PIDD1Q9HB75 910 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 SNRKQ9NRH2 765 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 C1orf112Q9NSG2 853 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 PPP1R9AQ9ULJ8 1098 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 RFX7Q2KHR2 1363 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 TMEM232C9JQI7 657 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 BACH1O14867 736 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 TIMP1P01033 207 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 TGFB3P10600 412 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 CDK11BP21127 795 aaKnown RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 ABCD1P33897 745 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 MTX1Q13505 466 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 SYDE2Q5VT97 1194 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 CNKSR3Q6P9H4 555 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 HAUS6Q7Z4H7 955 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 AMIGO3Q86WK7 504 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 GCNAQ96QF7 691 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 ZNF576Q9H609 170 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 HELLSQ9NRZ9 838 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 BMP2KQ9NSY1 1161 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 MTMR7Q9Y216 660 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 PCDHA1Q9Y5I3 950 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 TIAM2Q8IVF5 1701 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 KIAA0100Q14667 2235 aaKnown RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 DICER1Q9UPY3 1922 aaKnown RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 KIAA0355O15063 1070 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 TREHO43280 583 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 MAP3K13O43283 966 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 GALR2O43603 387 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 GNA11P29992 359 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 DPP6P42658 865 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 CACNB3P54284 484 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 FOXO4P98177 505 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 SLFN5Q08AF3 891 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 SFSWAPQ12872 951 aaKnown RBP3.27□□□□□ -1.89
CLOCK-209ENST00000511124 C1orf228Q6PIY5 440 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 RHPN1Q8TCX5 695 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 SSH1Q8WYL5 1049 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 TRERF1Q96PN7 1200 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 KIF2CQ99661 725 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 EMILIN2Q9BXX0 1053 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 CRISPLD2Q9H0B8 497 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 DZANK1Q9NVP4 752 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 DACT1Q9NYF0 836 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 HMG20BQ9P0W2 317 aa3.27□□□□□ -1.89
CLOCK-209ENST00000511124 PATL2C9JE40 543 aaKnown RBP3.26□□□□□ -1.89
CLOCK-209ENST00000511124 MAGEB2O15479 319 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 SELPP16109 830 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 ATP5JP18859 108 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 PRDX5P30044 214 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 ELF1P32519 619 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 MAGEA9P43362 315 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 NDUFV1P49821 464 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 SLC26A2P50443 739 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 TIMM10P62072 90 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 TFDP1Q14186 410 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 SBK1Q52WX2 424 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 C1orf53Q5VUE5 145 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 PDXDC2PQ6P474 469 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 NFRKBQ6P4R8 1299 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 ERMNQ8TAM6 284 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 PAK6Q9NQU5 681 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-209ENST00000511124 EVA1BQ9NVM1 165 aa3.26□□□□□ -1.89
CLOCK-209ENST00000511124 GMEB2Q9UKD1 530 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms